RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 DDX60LQ5H9U9 1706 aaKnown RBP20.83■□□□□ 0.92
SEMA3B-209ENST00000456560 C16orf86Q6ZW13 317 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 RASGRP4Q8TDF6 673 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 FAM163AQ96GL9 167 aaPredicted RBP20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 LZTS2Q9BRK4 669 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 GGA1Q9UJY5 639 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 UBR3Q6ZT12 1888 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 SNED1Q8TER0 1413 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 PHLPP2Q6ZVD8 1323 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 STXBP3O00186 592 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 ZSCAN12O43309 604 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 SERPINB2P05120 415 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 PBX1P40424 430 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 CDK8P49336 464 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 CCDC148Q8NFR7 591 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 RBM17Q96I25 401 aaKnown RBP20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 BLZF1Q9H2G9 400 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 ZNF287Q9HBT7 754 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 BARHL2Q9NY43 387 aa20.82■□□□□ 0.92
SEMA3B-209ENST00000456560 TEX33O43247 280 aa20.81■□□□□ 0.92
SEMA3B-209ENST00000456560 ADKP55263 362 aaKnown RBP20.81■□□□□ 0.92
SEMA3B-209ENST00000456560 NEDD1Q8NHV4 660 aa20.81■□□□□ 0.92
SEMA3B-209ENST00000456560 PODXL2Q9NZ53 605 aa20.81■□□□□ 0.92
SEMA3B-209ENST00000456560 ADD3Q9UEY8 706 aaKnown RBP20.81■□□□□ 0.92
SEMA3B-209ENST00000456560 PPP2R2CQ9Y2T4 447 aa20.81■□□□□ 0.92
SEMA3B-209ENST00000456560 ST5P78524 1137 aa20.81■□□□□ 0.92
SEMA3B-209ENST00000456560 HOMER1Q86YM7 354 aa20.81■□□□□ 0.92
SEMA3B-209ENST00000456560 TEX11Q8IYF3 940 aa20.81■□□□□ 0.92
SEMA3B-209ENST00000456560 STX8Q9UNK0 236 aa20.81■□□□□ 0.92
SEMA3B-209ENST00000456560 CCDC194A0A1B0GVG4 234 aa20.8■□□□□ 0.92
SEMA3B-209ENST00000456560 BBOX1O75936 387 aa20.8■□□□□ 0.92
SEMA3B-209ENST00000456560 HOXA10P31260 410 aaPredicted RBP20.8■□□□□ 0.92
SEMA3B-209ENST00000456560 RHBDL3P58872 404 aa20.8■□□□□ 0.92
SEMA3B-209ENST00000456560 SLC27A3Q5K4L6 730 aa20.8■□□□□ 0.92
SEMA3B-209ENST00000456560 SPZ1Q9BXG8 430 aa20.8■□□□□ 0.92
SEMA3B-209ENST00000456560 CTAGE1Q96RT6 745 aa20.8■□□□□ 0.92
SEMA3B-209ENST00000456560 PLCG2P16885 1265 aa20.79■□□□□ 0.92
SEMA3B-209ENST00000456560 HEATR3Q7Z4Q2 680 aa20.79■□□□□ 0.92
SEMA3B-209ENST00000456560 ZNF397Q8NF99 534 aaPredicted RBP20.79■□□□□ 0.92
SEMA3B-209ENST00000456560 EYA3Q99504 573 aa20.79■□□□□ 0.92
SEMA3B-209ENST00000456560 POLLQ9UGP5 575 aa20.79■□□□□ 0.92
SEMA3B-209ENST00000456560 CTNND2Q9UQB3 1225 aa20.79■□□□□ 0.92
SEMA3B-209ENST00000456560 GAKO14976 1311 aa20.79■□□□□ 0.92
SEMA3B-209ENST00000456560 FLT1P17948 1338 aa20.79■□□□□ 0.92
SEMA3B-209ENST00000456560 KLRF2D3W0D1 207 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 FANCGO15287 622 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 RRAGBQ5VZM2 374 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 ZNF771Q7L3S4 317 aaPredicted RBP20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 TBC1D16Q8TBP0 767 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 PANX2Q96RD6 677 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 TMEM60Q9H2L4 133 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.78■□□□□ 0.927e-13■□□□□ 10.5
SEMA3B-209ENST00000456560 DNAI1Q9UI46 699 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 RWDD2AQ9UIY3 292 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 V9GYY5 206 aaPredicted RBP20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 PLSCR1O15162 318 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 GOLGA8HP0CJ92 632 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 CDC25AP30304 524 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 TXLNAP40222 546 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 NOVP48745 357 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 GABPB1Q06547 395 aaPredicted RBP20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 INF2Q27J81 1249 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 ZNF658Q5TYW1 1059 aaPredicted RBP20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 DTHD1Q6ZMT9 781 aa20.78■□□□□ 0.92
SEMA3B-209ENST00000456560 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.78■□□□□ 0.925e-7■□□□□ 10.8
SEMA3B-209ENST00000456560 LRRC10BA6NIK2 292 aa20.77■□□□□ 0.92
SEMA3B-209ENST00000456560 AKR1B15C9JRZ8 316 aaPredicted RBP20.77■□□□□ 0.92
SEMA3B-209ENST00000456560 RPN1P04843 607 aaKnown RBP20.77■□□□□ 0.92
SEMA3B-209ENST00000456560 KARSQ15046 597 aaKnown RBP20.77■□□□□ 0.92
SEMA3B-209ENST00000456560 MFSD14BQ5SR56 506 aa20.77■□□□□ 0.92
SEMA3B-209ENST00000456560 ZMYND12Q9H0C1 365 aa20.77■□□□□ 0.92
SEMA3B-209ENST00000456560 DISC1Q9NRI5 854 aa20.77■□□□□ 0.92
SEMA3B-209ENST00000456560 RMND1Q9NWS8 449 aa20.77■□□□□ 0.92
SEMA3B-209ENST00000456560 LIMA1Q9UHB6 759 aaKnown RBP20.77■□□□□ 0.92
SEMA3B-209ENST00000456560 EN1Q05925 392 aaPredicted RBP20.77■□□□□ 0.91
SEMA3B-209ENST00000456560 NAALADL2Q58DX5 795 aa20.77■□□□□ 0.91
SEMA3B-209ENST00000456560 TOGARAM2Q6ZUX3 1019 aa20.77■□□□□ 0.91
SEMA3B-209ENST00000456560 TBC1D22AQ8WUA7 517 aa20.77■□□□□ 0.91
SEMA3B-209ENST00000456560 CRAMP1Q96RY5 1269 aa20.77■□□□□ 0.91
SEMA3B-209ENST00000456560 MTMR7Q9Y216 660 aa20.77■□□□□ 0.91
SEMA3B-209ENST00000456560 GOLGA6L9A6NEM1 432 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 LAD1O00515 517 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 SMARCA1P28370 1054 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 PRPHP41219 470 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 STAT6P42226 847 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 KMT5BQ4FZB7 885 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 RASGRP2Q7LDG7 609 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 SLF2Q8IX21 1173 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 TNS1Q9HBL0 1735 aaKnown RBP20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 MYH1P12882 1939 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 KLRG2A4D1S0 409 aaPredicted RBP20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 DDR1Q08345 913 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 RBL2Q08999 1139 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 FILIP1LQ4L180 1135 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 IGSF22Q8N9C0 903 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 CCSER1Q9C0I3 900 aa20.76■□□□□ 0.91
SEMA3B-209ENST00000456560 LTBP1Q14766 1721 aa20.75■□□□□ 0.91
SEMA3B-209ENST00000456560 PARP1P09874 1014 aaKnown RBP20.75■□□□□ 0.91
SEMA3B-209ENST00000456560 PAK1Q13153 545 aa20.75■□□□□ 0.91
SEMA3B-209ENST00000456560 ELF2Q15723 593 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms