RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 PRKAR2AP13861 404 aaKnown RBP20.44■□□□□ 0.86
USP39-208ENST00000455732 PTH1RQ03431 593 aa20.44■□□□□ 0.86
USP39-208ENST00000455732 PLS1Q14651 629 aa20.44■□□□□ 0.86
USP39-208ENST00000455732 PRPF38AQ8NAV1 312 aaKnown RBP20.44■□□□□ 0.86
USP39-208ENST00000455732 TTC14Q96N46 770 aa20.44■□□□□ 0.86
USP39-208ENST00000455732 MROH8Q9H579 483 aa20.44■□□□□ 0.86
USP39-208ENST00000455732 CNNM2Q9H8M5 875 aa20.44■□□□□ 0.86
USP39-208ENST00000455732 FLRT1Q9NZU1 646 aa20.44■□□□□ 0.86
USP39-208ENST00000455732 FEM1BQ9UK73 627 aa20.44■□□□□ 0.86
USP39-208ENST00000455732 ZNF214Q9UL59 606 aaPredicted RBP20.44■□□□□ 0.86
USP39-208ENST00000455732 PLA2G6O60733 806 aa20.43■□□□□ 0.86
USP39-208ENST00000455732 IGHA2P01877 340 aa20.43■□□□□ 0.86
USP39-208ENST00000455732 TOP1P11387 765 aaKnown RBP20.43■□□□□ 0.86
USP39-208ENST00000455732 CACNB2Q08289 660 aaPredicted RBP20.43■□□□□ 0.86
USP39-208ENST00000455732 NPLOC4Q8TAT6 608 aa20.43■□□□□ 0.86
USP39-208ENST00000455732 MAP4K1Q92918 833 aa20.43■□□□□ 0.86
USP39-208ENST00000455732 ESYT1Q9BSJ8 1104 aa20.43■□□□□ 0.86
USP39-208ENST00000455732 KRT23Q9C075 422 aa20.43■□□□□ 0.86
USP39-208ENST00000455732 PPP4R2Q9NY27 417 aa20.43■□□□□ 0.86
USP39-208ENST00000455732 ALPK3Q96L96 1907 aa20.43■□□□□ 0.86
USP39-208ENST00000455732 SLC25A27O95847 323 aa20.42■□□□□ 0.86
USP39-208ENST00000455732 ADORA2AP29274 412 aa20.42■□□□□ 0.86
USP39-208ENST00000455732 SLC1A4P43007 532 aa20.42■□□□□ 0.86
USP39-208ENST00000455732 CCDC178Q5BJE1 867 aa20.42■□□□□ 0.86
USP39-208ENST00000455732 RCSD1Q6JBY9 416 aa20.42■□□□□ 0.86
USP39-208ENST00000455732 NCAPG2Q86XI2 1143 aa20.42■□□□□ 0.86
USP39-208ENST00000455732 RIOX2Q8IUF8 465 aa20.42■□□□□ 0.86
USP39-208ENST00000455732 ABRAQ8N0Z2 381 aa20.42■□□□□ 0.86
USP39-208ENST00000455732 TMEM47Q9BQJ4 181 aa20.42■□□□□ 0.86
USP39-208ENST00000455732 B4E1Z4 1266 aa20.41■□□□□ 0.86
USP39-208ENST00000455732 ATP2A1O14983 1001 aa20.41■□□□□ 0.86
USP39-208ENST00000455732 KDM4AO75164 1064 aa20.41■□□□□ 0.86
USP39-208ENST00000455732 FARP2O94887 1054 aaPredicted RBP20.41■□□□□ 0.86
USP39-208ENST00000455732 TFRCP02786 760 aaKnown RBP20.41■□□□□ 0.86
USP39-208ENST00000455732 CYP21A2P08686 494 aa20.41■□□□□ 0.86
USP39-208ENST00000455732 COPB2P35606 906 aa20.41■□□□□ 0.86
USP39-208ENST00000455732 IQCA1Q86XH1 822 aa20.41■□□□□ 0.86
USP39-208ENST00000455732 DGKHQ86XP1 1220 aa20.41■□□□□ 0.86
USP39-208ENST00000455732 DCAF4Q8WV16 495 aa20.41■□□□□ 0.86
USP39-208ENST00000455732 COBLO75128 1261 aa20.4■□□□□ 0.86
USP39-208ENST00000455732 FDX1P10109 184 aa20.4■□□□□ 0.86
USP39-208ENST00000455732 MCCP23508 829 aa20.4■□□□□ 0.86
USP39-208ENST00000455732 STAT3P40763 770 aa20.4■□□□□ 0.86
USP39-208ENST00000455732 STAT2P52630 851 aa20.4■□□□□ 0.86
USP39-208ENST00000455732 HABP4Q5JVS0 413 aaKnown RBP20.4■□□□□ 0.86
USP39-208ENST00000455732 DPP9Q86TI2 863 aa20.4■□□□□ 0.86
USP39-208ENST00000455732 FAM160B2Q86V87 743 aa20.4■□□□□ 0.86
USP39-208ENST00000455732 ANKS1AQ92625 1134 aa20.4■□□□□ 0.86
USP39-208ENST00000455732 LSG1Q9H089 658 aaKnown RBP20.4■□□□□ 0.86
USP39-208ENST00000455732 SLC38A10Q9HBR0 1119 aa20.4■□□□□ 0.86
USP39-208ENST00000455732 SMCHD1A6NHR9 2005 aa20.39■□□□□ 0.86
USP39-208ENST00000455732 TMEM232C9JQI7 657 aa20.39■□□□□ 0.85
USP39-208ENST00000455732 CCND3P30281 292 aaPredicted RBP20.39■□□□□ 0.85
USP39-208ENST00000455732 OAZ1P54368 228 aa20.39■□□□□ 0.85
USP39-208ENST00000455732 MFSD14CQ5VZR4 134 aa20.39■□□□□ 0.85
USP39-208ENST00000455732 KIAA1211Q6ZU35 1233 aa20.39■□□□□ 0.85
USP39-208ENST00000455732 CHURC1Q8WUH1 139 aa20.39■□□□□ 0.85
USP39-208ENST00000455732 KIFC2Q96AC6 838 aa20.39■□□□□ 0.85
USP39-208ENST00000455732 TEX13BQ9BXU2 312 aa20.39■□□□□ 0.85
USP39-208ENST00000455732 OGDHLQ9ULD0 1010 aa20.39■□□□□ 0.85
USP39-208ENST00000455732 RBM8AQ9Y5S9 174 aaKnown RBP20.39■□□□□ 0.85
USP39-208ENST00000455732 ZBED4O75132 1171 aa20.38■□□□□ 0.85
USP39-208ENST00000455732 CDC45O75419 566 aa20.38■□□□□ 0.85
USP39-208ENST00000455732 SNHG28P0DPA3 235 aa20.38■□□□□ 0.85
USP39-208ENST00000455732 FCER1AP12319 257 aa20.38■□□□□ 0.85
USP39-208ENST00000455732 MNX1P50219 401 aaPredicted RBP20.38■□□□□ 0.85
USP39-208ENST00000455732 OLFML2BQ68BL8 750 aa20.38■□□□□ 0.85
USP39-208ENST00000455732 ANKLE1Q8NAG6 615 aa20.38■□□□□ 0.85
USP39-208ENST00000455732 ZSCAN10Q96SZ4 725 aaPredicted RBP20.38■□□□□ 0.85
USP39-208ENST00000455732 ZSWIM5Q9P217 1185 aa20.38■□□□□ 0.85
USP39-208ENST00000455732 PDHBP11177 359 aa20.37■□□□□ 0.85
USP39-208ENST00000455732 CYP2C19P33261 490 aa20.37■□□□□ 0.85
USP39-208ENST00000455732 TRDNQ13061 729 aa20.37■□□□□ 0.85
USP39-208ENST00000455732 LHX8Q68G74 356 aa20.37■□□□□ 0.85
USP39-208ENST00000455732 CASC1Q6TDU7 716 aa20.37■□□□□ 0.85
USP39-208ENST00000455732 KCTD1Q719H9 257 aa20.37■□□□□ 0.85
USP39-208ENST00000455732 RASGRP2Q7LDG7 609 aa20.37■□□□□ 0.85
USP39-208ENST00000455732 ZKSCAN3Q9BRR0 538 aa20.37■□□□□ 0.85
USP39-208ENST00000455732 RIPK3Q9Y572 518 aa20.37■□□□□ 0.85
USP39-208ENST00000455732 TNKSO95271 1327 aa20.36■□□□□ 0.85
USP39-208ENST00000455732 SNRNP48Q6IEG0 339 aaKnown RBP20.36■□□□□ 0.85
USP39-208ENST00000455732 BTNL9Q6UXG8 535 aa20.36■□□□□ 0.85
USP39-208ENST00000455732 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.36■□□□□ 0.85
USP39-208ENST00000455732 ENAHQ8N8S7 591 aaPredicted RBP20.36■□□□□ 0.85
USP39-208ENST00000455732 DIS3LQ8TF46 1054 aaKnown RBP20.36■□□□□ 0.85
USP39-208ENST00000455732 PAWRQ96IZ0 340 aaKnown RBP20.36■□□□□ 0.85
USP39-208ENST00000455732 MMP19Q99542 508 aa20.36■□□□□ 0.85
USP39-208ENST00000455732 UBAC1Q9BSL1 405 aa20.36■□□□□ 0.85
USP39-208ENST00000455732 SLC5A4Q9NY91 659 aa20.36■□□□□ 0.85
USP39-208ENST00000455732 ISY1Q9ULR0 285 aaKnown RBP20.36■□□□□ 0.85
USP39-208ENST00000455732 MCM3APO60318 1980 aa20.35■□□□□ 0.85
USP39-208ENST00000455732 E7EWF7 191 aa20.35■□□□□ 0.85
USP39-208ENST00000455732 CYBAP13498 195 aa20.35■□□□□ 0.85
USP39-208ENST00000455732 CCDC96Q2M329 555 aa20.35■□□□□ 0.85
USP39-208ENST00000455732 TRPV1Q8NER1 839 aa20.35■□□□□ 0.85
USP39-208ENST00000455732 MAML3Q96JK9 1138 aa20.35■□□□□ 0.85
USP39-208ENST00000455732 HTATIP2Q9BUP3 242 aa20.35■□□□□ 0.85
USP39-208ENST00000455732 CTDP1Q9Y5B0 961 aaPredicted RBP20.35■□□□□ 0.85
USP39-208ENST00000455732 TAF6LQ9Y6J9 622 aa20.35■□□□□ 0.85
USP39-208ENST00000455732 ZNF543Q08ER8 600 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms