RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 ZNF865P0CJ78 1059 aaPredicted RBP21.02■□□□□ 0.96
CCDC144B-204ENST00000455629 LRRFIP1Q32MZ4 808 aaKnown RBP21.02■□□□□ 0.96
CCDC144B-204ENST00000455629 SNRNP48Q6IEG0 339 aaKnown RBP21.02■□□□□ 0.96
CCDC144B-204ENST00000455629 SYNPO2Q9UMS6 1093 aa21.02■□□□□ 0.96
CCDC144B-204ENST00000455629 MYH4Q9Y623 1939 aa21.02■□□□□ 0.95
CCDC144B-204ENST00000455629 IGKV6D-41A0A0C4DH26 115 aa21.01■□□□□ 0.95
CCDC144B-204ENST00000455629 PGK1P00558 417 aa21.01■□□□□ 0.95
CCDC144B-204ENST00000455629 NEFLP07196 543 aa21.01■□□□□ 0.95
CCDC144B-204ENST00000455629 TAL1P17542 331 aaPredicted RBP21.01■□□□□ 0.95
CCDC144B-204ENST00000455629 TDO2P48775 406 aa21.01■□□□□ 0.95
CCDC144B-204ENST00000455629 TLE2Q04725 743 aa21.01■□□□□ 0.95
CCDC144B-204ENST00000455629 ZNF444Q8N0Y2 327 aaPredicted RBP21.01■□□□□ 0.95
CCDC144B-204ENST00000455629 STK11IPQ8N1F8 1099 aa21.01■□□□□ 0.95
CCDC144B-204ENST00000455629 BADQ92934 168 aa21.01■□□□□ 0.95
CCDC144B-204ENST00000455629 CLIP2Q9UDT6 1046 aa21.01■□□□□ 0.95
CCDC144B-204ENST00000455629 TACC3Q9Y6A5 838 aa21.01■□□□□ 0.95
CCDC144B-204ENST00000455629 SYNGAP1Q96PV0 1343 aa21.01■□□□□ 0.95
CCDC144B-204ENST00000455629 SHHQ15465 462 aa21■□□□□ 0.95
CCDC144B-204ENST00000455629 MAMDC4Q6UXC1 1216 aa21■□□□□ 0.95
CCDC144B-204ENST00000455629 MKL1Q969V6 931 aa21■□□□□ 0.95
CCDC144B-204ENST00000455629 DDX11Q96FC9 970 aa21■□□□□ 0.95
CCDC144B-204ENST00000455629 TSEN34Q9BSV6 310 aaKnown RBP21■□□□□ 0.95
CCDC144B-204ENST00000455629 EPB41L4AQ9HCS5 686 aaPredicted RBP21■□□□□ 0.95
CCDC144B-204ENST00000455629 DNAJC25-GNG10A0A024R161 153 aa20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 A0A1W2PQ45 241 aaPredicted RBP20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 A0A1W2PQY0 241 aa20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 TRIM43BA6NCK2 446 aa20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 ZBED4O75132 1171 aa20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 APPP05067 770 aa20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 ZNF697Q5TEC3 545 aa20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 TSHZ3Q63HK5 1081 aa20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 SH3RF1Q7Z6J0 888 aa20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 ZNF467Q7Z7K2 595 aaPredicted RBP20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 TRIM43Q96BQ3 446 aaPredicted RBP20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 GUCD1Q96NT3 240 aa20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 MTMR4Q9NYA4 1195 aa20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 RIPK3Q9Y572 518 aa20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 CTDP1Q9Y5B0 961 aaPredicted RBP20.99■□□□□ 0.95
CCDC144B-204ENST00000455629 PATL2C9JE40 543 aaKnown RBP20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 M0R2C6 588 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 ADAMTS4O75173 837 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 TTLL1O95922 423 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 CLTBP09497 229 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 C9orf50Q5SZB4 431 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 GMCL1P1Q8NEA9 526 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 CEP95Q96GE4 821 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 NACAP1Q9BZK3 213 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 SLC38A10Q9HBR0 1119 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 FEM1BQ9UK73 627 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 FAM184BQ9ULE4 1060 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 PCDHB15Q9Y5E8 787 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 TTC41PQ6P2S7 1318 aa20.98■□□□□ 0.95
CCDC144B-204ENST00000455629 PRDM1O75626 825 aa20.97■□□□□ 0.95
CCDC144B-204ENST00000455629 SNAI1O95863 264 aaPredicted RBP20.97■□□□□ 0.95
CCDC144B-204ENST00000455629 OAZ1P54368 228 aa20.97■□□□□ 0.95
CCDC144B-204ENST00000455629 IFNL3Q8IZI9 196 aa20.97■□□□□ 0.95
CCDC144B-204ENST00000455629 CPXCR1Q8N123 301 aa20.97■□□□□ 0.95
CCDC144B-204ENST00000455629 NUP133Q8WUM0 1156 aa20.97■□□□□ 0.95
CCDC144B-204ENST00000455629 KIFC2Q96AC6 838 aa20.97■□□□□ 0.95
CCDC144B-204ENST00000455629 FBXO40Q9UH90 709 aa20.97■□□□□ 0.95
CCDC144B-204ENST00000455629 PLIN4Q96Q06 1357 aa20.97■□□□□ 0.95
CCDC144B-204ENST00000455629 UNC80Q8N2C7 3258 aa20.96■□□□□ 0.95
CCDC144B-204ENST00000455629 KIAA0355O15063 1070 aa20.96■□□□□ 0.95
CCDC144B-204ENST00000455629 ERC2O15083 957 aa20.96■□□□□ 0.95
CCDC144B-204ENST00000455629 SLC3A2P08195 630 aaKnown RBP20.96■□□□□ 0.95
CCDC144B-204ENST00000455629 ACLYP53396 1101 aa20.96■□□□□ 0.95
CCDC144B-204ENST00000455629 SMAD3P84022 425 aaKnown RBP20.96■□□□□ 0.95
CCDC144B-204ENST00000455629 PDE4BQ07343 736 aa20.96■□□□□ 0.95
CCDC144B-204ENST00000455629 CHST13Q8NET6 341 aa20.96■□□□□ 0.95
CCDC144B-204ENST00000455629 LENG1Q96BZ8 264 aaPredicted RBP20.96■□□□□ 0.95
CCDC144B-204ENST00000455629 TOX2Q96NM4 488 aa20.96■□□□□ 0.95
CCDC144B-204ENST00000455629 SYNRGQ9UMZ2 1314 aa20.96■□□□□ 0.95
CCDC144B-204ENST00000455629 MOXD2PA6NHM9 499 aa20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 PQBP1O60828 265 aaKnown RBP20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 DUSP11O75319 330 aaKnown RBP20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 TSPY3P0CV98 308 aa20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 TSPY8P0CW00 308 aa20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 FDX1P10109 184 aa20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 ANKRD33Q7Z3H0 272 aa20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 ANKRD35Q8N283 1001 aa20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 KLHDC9Q8NEP7 349 aa20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 NEDD1Q8NHV4 660 aa20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 FAM161BQ96MY7 647 aa20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 RAVER2Q9HCJ3 691 aaKnown RBP20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 STARD7Q9NQZ5 370 aa20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 ZHX1Q9UKY1 873 aaPredicted RBP20.95■□□□□ 0.94
CCDC144B-204ENST00000455629 RAG1P15918 1043 aa20.94■□□□□ 0.94
CCDC144B-204ENST00000455629 ITGB8P26012 769 aa20.94■□□□□ 0.94
CCDC144B-204ENST00000455629 SLC4A3P48751 1232 aa20.94■□□□□ 0.94
CCDC144B-204ENST00000455629 LRRC47Q8N1G4 583 aaKnown RBP20.94■□□□□ 0.94
CCDC144B-204ENST00000455629 ABHD16BQ9H3Z7 469 aa20.94■□□□□ 0.94
CCDC144B-204ENST00000455629 DCDC2CA8MYV0 355 aa20.93■□□□□ 0.94
CCDC144B-204ENST00000455629 BMP3P12645 472 aa20.93■□□□□ 0.94
CCDC144B-204ENST00000455629 CST5P28325 142 aaPredicted RBP20.93■□□□□ 0.94
CCDC144B-204ENST00000455629 ACVR2BQ13705 512 aa20.93■□□□□ 0.94
CCDC144B-204ENST00000455629 PPP4R3BQ5MIZ7 849 aa20.93■□□□□ 0.94
CCDC144B-204ENST00000455629 SLFN13Q68D06 897 aa20.93■□□□□ 0.94
CCDC144B-204ENST00000455629 CCSAPQ6IQ19 270 aaPredicted RBP20.93■□□□□ 0.94
CCDC144B-204ENST00000455629 PI4K2BQ8TCG2 481 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms