RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 VSTM4Q8IW00 320 aa10.77□□□□□ -0.69
LINC01940-201ENST00000455228 TRIM58Q8NG06 486 aa10.77□□□□□ -0.69
LINC01940-201ENST00000455228 SCLT1Q96NL6 688 aa10.77□□□□□ -0.69
LINC01940-201ENST00000455228 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC01940-201ENST00000455228 EPC1Q9H2F5 836 aa10.77□□□□□ -0.69
LINC01940-201ENST00000455228 HOOK1Q9UJC3 728 aaKnown RBP10.77□□□□□ -0.69
LINC01940-201ENST00000455228 MRC1P22897 1456 aa10.77□□□□□ -0.69
LINC01940-201ENST00000455228 CASZ1Q86V15 1759 aa10.77□□□□□ -0.69
LINC01940-201ENST00000455228 CSB-PGBD3P0DP91 1061 aa10.77□□□□□ -0.69
LINC01940-201ENST00000455228 TATP17735 454 aaPredicted RBP10.77□□□□□ -0.69
LINC01940-201ENST00000455228 ZC3H6P61129 1189 aaKnown RBP10.77□□□□□ -0.69
LINC01940-201ENST00000455228 CMPK2Q5EBM0 449 aa10.77□□□□□ -0.69
LINC01940-201ENST00000455228 ZNF594Q96JF6 807 aaPredicted RBP10.77□□□□□ -0.69
LINC01940-201ENST00000455228 CCDC85AQ96PX6 553 aaPredicted RBP10.77□□□□□ -0.69
LINC01940-201ENST00000455228 MPHOSPH6Q99547 160 aaKnown RBP10.77□□□□□ -0.69
LINC01940-201ENST00000455228 AXIN2Q9Y2T1 843 aa10.77□□□□□ -0.69
LINC01940-201ENST00000455228 SUGT1Q9Y2Z0 365 aa10.77□□□□□ -0.69
LINC01940-201ENST00000455228 TMEM232C9JQI7 657 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 FGAP02671 866 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 WDR78Q5VTH9 848 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 HDXQ7Z353 690 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 LRRC49Q8IUZ0 686 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 CCDC114Q96M63 670 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 ANKRD27Q96NW4 1050 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 PAPOLBQ9NRJ5 636 aaKnown RBP10.76□□□□□ -0.69
LINC01940-201ENST00000455228 PARP3Q9Y6F1 533 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 MROH7-TTC4A0A0A0MT08 1334 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 ZC3H4Q9UPT8 1303 aaKnown RBP10.76□□□□□ -0.69
LINC01940-201ENST00000455228 A6NNZ2 444 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 CTAG1AP78358 180 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 PPP2R3AQ06190 1150 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 IFFO1Q0D2I5 559 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 BLMHQ13867 455 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 TUBB8Q3ZCM7 444 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 LRRC24Q50LG9 513 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 ATG9AQ7Z3C6 839 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 FCHSD1Q86WN1 690 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 VPS37DQ86XT2 251 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 PLBD2Q8NHP8 589 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 SPIRE2Q8WWL2 714 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 TRAIPQ9BWF2 469 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 PCDH18Q9HCL0 1135 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 VPS18Q9P253 973 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 RGPD2P0DJD1 1756 aa10.76□□□□□ -0.69
LINC01940-201ENST00000455228 EYA2O00167 538 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 RXRAP19793 462 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 COPB2P35606 906 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 ARHGAP25P42331 645 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 METAP2P50579 478 aaKnown RBP eCLIP10.75□□□□□ -0.69
LINC01940-201ENST00000455228 EMC10Q5UCC4 262 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 CCDC47Q96A33 483 aaKnown RBP10.75□□□□□ -0.69
LINC01940-201ENST00000455228 CIDEBQ9UHD4 219 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 SLC30A1Q9Y6M5 507 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 GRIN2DO15399 1336 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 NEDD4P46934 1319 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 ABL1P00519 1130 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 EZRP15311 586 aaKnown RBP10.75□□□□□ -0.69
LINC01940-201ENST00000455228 RANBP1P43487 201 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 LRRC23Q53EV4 343 aaPredicted RBP10.75□□□□□ -0.69
LINC01940-201ENST00000455228 GBP7Q8N8V2 638 aaPredicted RBP10.75□□□□□ -0.69
LINC01940-201ENST00000455228 ATP11CQ8NB49 1132 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 AIFM3Q96NN9 605 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 ZSWIM4Q9H7M6 989 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 GPR108Q9NPR9 543 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 TUBE1Q9UJT0 475 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 TRPC6Q9Y210 931 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 MARF1Q9Y4F3 1742 aaKnown RBP10.75□□□□□ -0.69
LINC01940-201ENST00000455228 NFAT5O94916 1531 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 MYH15Q9Y2K3 1946 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 ZFYP08048 801 aaPredicted RBP10.75□□□□□ -0.69
LINC01940-201ENST00000455228 MMEP08473 750 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 ADKP55263 362 aaKnown RBP10.75□□□□□ -0.69
LINC01940-201ENST00000455228 CCDC12Q8WUD4 166 aaPredicted RBP10.75□□□□□ -0.69
LINC01940-201ENST00000455228 MAML3Q96JK9 1138 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 KCNH3Q9ULD8 1083 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 HPS5Q9UPZ3 1129 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 PCDHA5Q9Y5H7 936 aa10.75□□□□□ -0.69
LINC01940-201ENST00000455228 VWA3AA6NCI4 1184 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 EBAG9O00559 213 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 NPTXRO95502 500 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 GNAQP50148 359 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 NSUN2Q08J23 767 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC01940-201ENST00000455228 USH1GQ495M9 461 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 KRT40Q6A162 431 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 MICU3Q86XE3 530 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 FAM114A1Q8IWE2 563 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 IFNL2Q8IZJ0 200 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 KCTD17Q8N5Z5 321 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 CNKSR1Q969H4 720 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 WDR24Q96S15 920 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 CDHR2Q9BYE9 1310 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 MEFVO15553 781 aaPredicted RBP10.74□□□□□ -0.69
LINC01940-201ENST00000455228 ATP9BO43861 1147 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 TUBBP07437 444 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 CABP4P57796 275 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 KARSQ15046 597 aaKnown RBP10.74□□□□□ -0.69
LINC01940-201ENST00000455228 Q4G0T1 1027 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 SHC4Q6S5L8 630 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 FBXL16Q8N461 479 aa10.74□□□□□ -0.69
LINC01940-201ENST00000455228 FAM76AQ8TAV0 307 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms