RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 ZNF784Q8NCA9 323 aaPredicted RBP19.28■□□□□ 0.68
LINC00963-208ENST00000454968 OPTNQ96CV9 577 aa19.28■□□□□ 0.68
LINC00963-208ENST00000454968 FEM1BQ9UK73 627 aa19.28■□□□□ 0.68
LINC00963-208ENST00000454968 A0A0G2JMZ2 1700 aa19.28■□□□□ 0.68
LINC00963-208ENST00000454968 TMEM232C9JQI7 657 aa19.27■□□□□ 0.68
LINC00963-208ENST00000454968 HMGCS2P54868 508 aa19.27■□□□□ 0.68
LINC00963-208ENST00000454968 FSTL1Q12841 308 aa19.27■□□□□ 0.68
LINC00963-208ENST00000454968 DGKZQ13574 1117 aa19.27■□□□□ 0.68
LINC00963-208ENST00000454968 ZYXQ15942 572 aaKnown RBP19.27■□□□□ 0.68
LINC00963-208ENST00000454968 PROCA1Q8NCQ7 364 aaPredicted RBP19.27■□□□□ 0.68
LINC00963-208ENST00000454968 CHURC1Q8WUH1 139 aa19.27■□□□□ 0.68
LINC00963-208ENST00000454968 OTUD5Q96G74 571 aa19.27■□□□□ 0.68
LINC00963-208ENST00000454968 AIFM3Q96NN9 605 aa19.27■□□□□ 0.68
LINC00963-208ENST00000454968 ALG1Q9BT22 464 aa19.27■□□□□ 0.68
LINC00963-208ENST00000454968 SH3GLB2Q9NR46 395 aa19.27■□□□□ 0.68
LINC00963-208ENST00000454968 hCG_1984214I3L0E3 225 aa19.26■□□□□ 0.67
LINC00963-208ENST00000454968 SLC16A2P36021 539 aa19.26■□□□□ 0.67
LINC00963-208ENST00000454968 SYDE2Q5VT97 1194 aa19.26■□□□□ 0.67
LINC00963-208ENST00000454968 SAPCD2Q86UD0 394 aa19.26■□□□□ 0.67
LINC00963-208ENST00000454968 ZNF713Q8N859 430 aaPredicted RBP19.26■□□□□ 0.67
LINC00963-208ENST00000454968 SLC10A4Q96EP9 437 aa19.26■□□□□ 0.67
LINC00963-208ENST00000454968 RRP36Q96EU6 259 aaKnown RBP19.26■□□□□ 0.67
LINC00963-208ENST00000454968 PRR12Q9ULL5 1215 aa19.26■□□□□ 0.67
LINC00963-208ENST00000454968 SMCHD1A6NHR9 2005 aa19.26■□□□□ 0.67
LINC00963-208ENST00000454968 MYH15Q9Y2K3 1946 aa19.26■□□□□ 0.67
LINC00963-208ENST00000454968 MYPNQ86TC9 1320 aa19.26■□□□□ 0.67
LINC00963-208ENST00000454968 WDR33Q9C0J8 1336 aaKnown RBP19.26■□□□□ 0.67
LINC00963-208ENST00000454968 PNMA6FA0A0J9YX94 578 aa19.25■□□□□ 0.67
LINC00963-208ENST00000454968 ZBTB5O15062 677 aa19.25■□□□□ 0.67
LINC00963-208ENST00000454968 ZBTB48P10074 688 aaPredicted RBP19.25■□□□□ 0.67
LINC00963-208ENST00000454968 YY1P25490 414 aa19.25■□□□□ 0.67
LINC00963-208ENST00000454968 HOXA7P31268 230 aaPredicted RBP19.25■□□□□ 0.67
LINC00963-208ENST00000454968 AKAP17AQ02040 695 aaKnown RBP19.25■□□□□ 0.67
LINC00963-208ENST00000454968 WNK4Q96J92 1243 aa19.25■□□□□ 0.67
LINC00963-208ENST00000454968 C8orf76Q96K31 380 aa19.25■□□□□ 0.67
LINC00963-208ENST00000454968 PIGSQ96S52 555 aa19.25■□□□□ 0.67
LINC00963-208ENST00000454968 RANBP17Q9H2T7 1088 aaKnown RBP19.25■□□□□ 0.67
LINC00963-208ENST00000454968 BARHL2Q9NY43 387 aa19.25■□□□□ 0.67
LINC00963-208ENST00000454968 ADAMTS5Q9UNA0 930 aa19.25■□□□□ 0.67
LINC00963-208ENST00000454968 COL11A1P12107 1806 aaPredicted RBP19.25■□□□□ 0.67
LINC00963-208ENST00000454968 NPY5RQ15761 445 aa19.25■□□□□ 0.67
LINC00963-208ENST00000454968 HHIPL1Q96JK4 782 aa19.25■□□□□ 0.67
LINC00963-208ENST00000454968 MS4A4AQ96JQ5 239 aa19.25■□□□□ 0.67
LINC00963-208ENST00000454968 RPAP3Q9H6T3 665 aaPredicted RBP19.25■□□□□ 0.67
LINC00963-208ENST00000454968 TMOD4Q9NZQ9 345 aa19.25■□□□□ 0.67
LINC00963-208ENST00000454968 hCG_1642624A0A1W2PR95 340 aa19.24■□□□□ 0.67
LINC00963-208ENST00000454968 RAD21O60216 631 aa19.24■□□□□ 0.67
LINC00963-208ENST00000454968 PPP1R11O60927 126 aaPredicted RBP19.24■□□□□ 0.67
LINC00963-208ENST00000454968 ZSCAN22P10073 491 aaPredicted RBP19.24■□□□□ 0.67
LINC00963-208ENST00000454968 KRT40Q6A162 431 aa19.24■□□□□ 0.67
LINC00963-208ENST00000454968 WWC2Q6AWC2 1192 aa19.24■□□□□ 0.67
LINC00963-208ENST00000454968 TYW1BQ6NUM6 668 aa19.24■□□□□ 0.67
LINC00963-208ENST00000454968 CATSPERGQ6ZRH7 1159 aa19.24■□□□□ 0.67
LINC00963-208ENST00000454968 PRPF38AQ8NAV1 312 aaKnown RBP19.24■□□□□ 0.67
LINC00963-208ENST00000454968 PHF20Q9BVI0 1012 aa19.24■□□□□ 0.67
LINC00963-208ENST00000454968 GJB4Q9NTQ9 266 aa19.24■□□□□ 0.67
LINC00963-208ENST00000454968 FBXO28Q9NVF7 368 aa19.24■□□□□ 0.67
LINC00963-208ENST00000454968 PPP1R9AQ9ULJ8 1098 aa19.24■□□□□ 0.67
LINC00963-208ENST00000454968 TLL2Q9Y6L7 1015 aa19.24■□□□□ 0.67
LINC00963-208ENST00000454968 ESYT2A0FGR8 921 aa19.23■□□□□ 0.67
LINC00963-208ENST00000454968 STXBP3O00186 592 aa19.23■□□□□ 0.67
LINC00963-208ENST00000454968 FDX1P10109 184 aa19.23■□□□□ 0.67
LINC00963-208ENST00000454968 SPRYD7Q5W111 196 aa19.23■□□□□ 0.67
LINC00963-208ENST00000454968 CLEC17AQ6ZS10 378 aa19.23■□□□□ 0.67
LINC00963-208ENST00000454968 SLF1Q9BQI6 1058 aa19.23■□□□□ 0.67
LINC00963-208ENST00000454968 SEC63Q9UGP8 760 aaKnown RBP19.23■□□□□ 0.67
LINC00963-208ENST00000454968 USP17L15C9J2P7 530 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 USP17L13C9JLJ4 530 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 USP17L11C9JVI0 530 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 USP17L18D6R9N7 530 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 USP17L22D6RA61 530 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 USP17L17D6RBQ6 530 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 USP17L19D6RCP7 530 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 USP17L20D6RJB6 530 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 MMP1P03956 469 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 HUNKP57058 714 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 USP17L24Q0WX57 530 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 SNAPC2Q13487 334 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 CDC37Q16543 378 aaPredicted RBP19.22■□□□□ 0.67
LINC00963-208ENST00000454968 QRICH1Q2TAL8 776 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 PPP1R18Q6NYC8 613 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 FASTKD5Q7L8L6 764 aaKnown RBP19.22■□□□□ 0.67
LINC00963-208ENST00000454968 VAT1LQ9HCJ6 419 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 AGTPBP1Q9UPW5 1226 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 TCHHQ07283 1943 aa19.22■□□□□ 0.67
LINC00963-208ENST00000454968 TESPA1A2RU30 521 aaPredicted RBP19.21■□□□□ 0.67
LINC00963-208ENST00000454968 F13A1P00488 732 aa19.21■□□□□ 0.67
LINC00963-208ENST00000454968 XBP1P17861 261 aa19.21■□□□□ 0.67
LINC00963-208ENST00000454968 U2AF2P26368 475 aaKnown RBP eCLIP19.21■□□□□ 0.67
LINC00963-208ENST00000454968 TREML2Q5T2D2 321 aa19.21■□□□□ 0.67
LINC00963-208ENST00000454968 GALNT17Q6IS24 598 aa19.21■□□□□ 0.67
LINC00963-208ENST00000454968 GPAT2Q6NUI2 795 aa19.21■□□□□ 0.67
LINC00963-208ENST00000454968 LBX2Q6XYB7 198 aa19.21■□□□□ 0.67
LINC00963-208ENST00000454968 TEX2Q8IWB9 1127 aa19.21■□□□□ 0.67
LINC00963-208ENST00000454968 DAGLBQ8NCG7 672 aa19.21■□□□□ 0.67
LINC00963-208ENST00000454968 REPS2Q8NFH8 660 aa19.21■□□□□ 0.67
LINC00963-208ENST00000454968 ZMYND12Q9H0C1 365 aa19.21■□□□□ 0.67
LINC00963-208ENST00000454968 SLC38A10Q9HBR0 1119 aa19.21■□□□□ 0.67
LINC00963-208ENST00000454968 VPS54Q9P1Q0 977 aa19.21■□□□□ 0.67
LINC00963-208ENST00000454968 M0R2N6 131 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms