RNA–Protein interactions for RNA: ENST00000454947.1

SH3BP4-207, Transcript of SH3 domain binding protein 4, humanhuman

TSL 4

Gene SH3BP4, Length 500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-207ENST00000454947 TM4SF4P48230 202 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 CCT2P78371 535 aaKnown RBP10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 IRX3P78415 501 aaPredicted RBP10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 BECN1Q14457 450 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 TREML2Q5T2D2 321 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 LBX2Q6XYB7 198 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 ANKRD23Q86SG2 305 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 IFNL1Q8IU54 200 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 CCDC83Q8IWF9 413 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 CCDC144CPQ8IYA2 1237 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 SPICE1Q8N0Z3 855 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 BRI3BPQ8WY22 251 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 CHMP4CQ96CF2 233 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 PARK7Q99497 189 aaKnown RBP10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 RNF26Q9BY78 433 aaPredicted RBP10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 SAGE1Q9NXZ1 904 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 FEM1BQ9UK73 627 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 AGTPBP1Q9UPW5 1226 aa10.9□□□□□ -0.66
SH3BP4-207ENST00000454947 FRMPD2Q68DX3 1309 aaPredicted RBP10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 PTPDC1A2A3K4 754 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 JAK2O60674 1132 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 CDKL5O76039 1030 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 FMNL1O95466 1100 aaPredicted RBP10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 GOLGA8HP0CJ92 632 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 STAT2P52630 851 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 STK3Q13188 491 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 TAF1CQ15572 869 aaPredicted RBP10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 PKN1Q16512 942 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 TTBK2Q6IQ55 1244 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 POTEEQ6S8J3 1075 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 CATSPERGQ6ZRH7 1159 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 KCTD1Q719H9 257 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 FAM160B2Q86V87 743 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 JMYQ8N9B5 988 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 RGS22Q8NE09 1264 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 REPS2Q8NFH8 660 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 RPAP3Q9H6T3 665 aaPredicted RBP10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 ZFYVE28Q9HCC9 887 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 PPP1R9AQ9ULJ8 1098 aa10.89□□□□□ -0.67
SH3BP4-207ENST00000454947 ADGRA2Q96PE1 1338 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 USP17L15C9J2P7 530 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 BTBD19C9JJ37 291 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 USP17L13C9JLJ4 530 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 TMEM232C9JQI7 657 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 USP17L11C9JVI0 530 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 USP17L18D6R9N7 530 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 USP17L22D6RA61 530 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 USP17L17D6RBQ6 530 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 USP17L19D6RCP7 530 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 USP17L20D6RJB6 530 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 PDHXO00330 501 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 PRPF3O43395 683 aaKnown RBP10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 USP17L24Q0WX57 530 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 CCDC96Q2M329 555 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 SYDE2Q5VT97 1194 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 FAM177A1Q8N128 213 aaPredicted RBP10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 SMCR8Q8TEV9 937 aaPredicted RBP10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 GTF3C2Q8WUA4 911 aaPredicted RBP10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 SHISA4Q96DD7 197 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 ZIC5Q96T25 663 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 PTPN18Q99952 460 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 SLF1Q9BQI6 1058 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 TANGO6Q9C0B7 1094 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 RANBP17Q9H2T7 1088 aaKnown RBP10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 CPVLQ9H3G5 476 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 JMJD4Q9H9V9 463 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 FBXO28Q9NVF7 368 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 PRR12Q9ULL5 1215 aa10.88□□□□□ -0.67
SH3BP4-207ENST00000454947 ZNF536O15090 1300 aa10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 SPDYE16A6NNV3 312 aaPredicted RBP10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 IGF2BP3O00425 579 aaKnown RBP eCLIP10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 CPLX1O14810 134 aa10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 ATP2A1O14983 1001 aa10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 PPP1R11O60927 126 aaPredicted RBP10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 TRPA1O75762 1119 aa10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 DSG3P32926 999 aa10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 HMGN5P82970 282 aaKnown RBP10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 IKQ13123 557 aaPredicted RBP10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 CPLX2Q6PUV4 134 aaKnown RBP10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 ADGRF4Q8IZF3 695 aa10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 CMTR1Q8N1G2 835 aaKnown RBP10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 CHURC1Q8WUH1 139 aa10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 PHKBQ93100 1093 aa10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 SLC38A10Q9HBR0 1119 aa10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 GPCPD1Q9NPB8 672 aa10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 WBP1LQ9NX94 342 aa10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 RNF186Q9NXI6 227 aa10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.87□□□□□ -0.67
SH3BP4-207ENST00000454947 BAZ2BQ9UIF8 2168 aaKnown RBP10.86□□□□□ -0.67
SH3BP4-207ENST00000454947 hCG_1984214I3L0E3 225 aa10.86□□□□□ -0.67
SH3BP4-207ENST00000454947 DEXIO95424 95 aa10.86□□□□□ -0.67
SH3BP4-207ENST00000454947 HSPA1AP0DMV8 641 aaKnown RBP10.86□□□□□ -0.67
SH3BP4-207ENST00000454947 HSPA1BP0DMV9 641 aaKnown RBP10.86□□□□□ -0.67
SH3BP4-207ENST00000454947 FDX1P10109 184 aa10.86□□□□□ -0.67
SH3BP4-207ENST00000454947 SLC16A2P36021 539 aa10.86□□□□□ -0.67
SH3BP4-207ENST00000454947 OAZ1P54368 228 aa10.86□□□□□ -0.67
SH3BP4-207ENST00000454947 PFKFB3Q16875 520 aaPredicted RBP10.86□□□□□ -0.67
SH3BP4-207ENST00000454947 FAM43AQ8N2R8 423 aa10.86□□□□□ -0.67
SH3BP4-207ENST00000454947 ZNF713Q8N859 430 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms