RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 SMCO2A6NFE2 343 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 DDTLA6NHG4 134 aaPredicted RBP10.07□□□□□ -0.8
RPE-216ENST00000454822 MPHOSPH10O00566 681 aaKnown RBP10.07□□□□□ -0.8
RPE-216ENST00000454822 IKBKBO14920 756 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 NPM3O75607 178 aaKnown RBP10.07□□□□□ -0.8
RPE-216ENST00000454822 SLFN14P0C7P3 912 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 BMP6P22004 513 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 BAG6P46379 1132 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 SF3B2Q13435 895 aaKnown RBP10.07□□□□□ -0.8
RPE-216ENST00000454822 ARL6IP4Q66PJ3 421 aaKnown RBP10.07□□□□□ -0.8
RPE-216ENST00000454822 SH3BP5LQ7L8J4 393 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 TTLL6Q8N841 843 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 CCDC12Q8WUD4 166 aaPredicted RBP10.07□□□□□ -0.8
RPE-216ENST00000454822 SMARCE1Q969G3 411 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 CCDC17Q96LX7 622 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 DNAJC18Q9H819 358 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 GPCPD1Q9NPB8 672 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 PI4KBQ9UBF8 816 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 GNA11P29992 359 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 TPM4P67936 248 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 INF2Q27J81 1249 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 SOGA3Q5TF21 947 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 PAGE5Q96GU1 130 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 TDRD3Q9H7E2 651 aaKnown RBP10.07□□□□□ -0.8
RPE-216ENST00000454822 C6orf50Q9HD87 102 aa10.07□□□□□ -0.8
RPE-216ENST00000454822 ATP2B2Q01814 1243 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 ZNF543Q08ER8 600 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 MORC3Q14149 939 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 CCDC144BQ3MJ40 725 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 CFAP100Q494V2 611 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 GRIPAP1Q4V328 841 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 ZSCAN29Q8IWY8 852 aaPredicted RBP10.06□□□□□ -0.8
RPE-216ENST00000454822 RTKN2Q8IZC4 609 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 SPATA20Q8TB22 786 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 CCDC34Q96HJ3 373 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 PRMT6Q96LA8 375 aaPredicted RBP10.06□□□□□ -0.8
RPE-216ENST00000454822 PYCARDQ9ULZ3 195 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 ZNF646O15015 1829 aaPredicted RBP10.06□□□□□ -0.8
RPE-216ENST00000454822 FAM196BA6NMK8 535 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 DPEP1P16444 411 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 KCNA3P22001 575 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 LONP1P36776 959 aaKnown RBP10.06□□□□□ -0.8
RPE-216ENST00000454822 AFMP43652 599 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 MYL5Q02045 173 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 NOLC1Q14978 699 aaKnown RBP eCLIP10.06□□□□□ -0.8
RPE-216ENST00000454822 CERKLQ49MI3 558 aaPredicted RBP10.06□□□□□ -0.8
RPE-216ENST00000454822 CCDC93Q567U6 631 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 PPP4R3BQ5MIZ7 849 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 TRIML1Q8N9V2 468 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 MLKLQ8NB16 471 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 KIAA1524Q8TCG1 905 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 HSD3B7Q9H2F3 369 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 TMEM60Q9H2L4 133 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 C10orf71Q711Q0 1435 aa10.06□□□□□ -0.8
RPE-216ENST00000454822 ESYT2A0FGR8 921 aa10.05□□□□□ -0.8
RPE-216ENST00000454822 SMC2O95347 1197 aa10.05□□□□□ -0.8
RPE-216ENST00000454822 LMOD1P29536 600 aaPredicted RBP10.05□□□□□ -0.8
RPE-216ENST00000454822 NONOQ15233 471 aaKnown RBP eCLIP10.05□□□□□ -0.8
RPE-216ENST00000454822 E2F4Q16254 413 aa10.05□□□□□ -0.8
RPE-216ENST00000454822 TTBK2Q6IQ55 1244 aa10.05□□□□□ -0.8
RPE-216ENST00000454822 TATDN1Q6P1N9 297 aa10.05□□□□□ -0.8
RPE-216ENST00000454822 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.05□□□□□ -0.8
RPE-216ENST00000454822 DTHD1Q6ZMT9 781 aa10.05□□□□□ -0.8
RPE-216ENST00000454822 C17orf53Q8N3J3 647 aaPredicted RBP10.05□□□□□ -0.8
RPE-216ENST00000454822 IQUBQ8NA54 791 aa10.05□□□□□ -0.8
RPE-216ENST00000454822 COA7Q96BR5 231 aa10.05□□□□□ -0.8
RPE-216ENST00000454822 JMJD4Q9H9V9 463 aa10.05□□□□□ -0.8
RPE-216ENST00000454822 IFNKQ9P0W0 207 aa10.05□□□□□ -0.8
RPE-216ENST00000454822 hCG_1984214I3L0E3 225 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 ENTPD3O75355 529 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 FANCCQ00597 558 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 LRMPQ12912 555 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 SHROOM1Q2M3G4 852 aaPredicted RBP10.04□□□□□ -0.8
RPE-216ENST00000454822 ADGRF4Q8IZF3 695 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 ZNF713Q8N859 430 aaPredicted RBP10.04□□□□□ -0.8
RPE-216ENST00000454822 SLC16A10Q8TF71 515 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
RPE-216ENST00000454822 UBE2Q2Q8WVN8 375 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 MKL1Q969V6 931 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 PSMD1Q99460 953 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 PYM1Q9BRP8 204 aaKnown RBP10.04□□□□□ -0.8
RPE-216ENST00000454822 TRIM34Q9BYJ4 488 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 XPO4Q9C0E2 1151 aaKnown RBP10.04□□□□□ -0.8
RPE-216ENST00000454822 KANSL2Q9H9L4 492 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 BIN2Q9UBW5 565 aaPredicted RBP10.04□□□□□ -0.8
RPE-216ENST00000454822 GREB1LQ9C091 1923 aaPredicted RBP10.04□□□□□ -0.8
RPE-216ENST00000454822 SIPA1L1O43166 1804 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 PNMA6FA0A0J9YX94 578 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 ATP1A3P13637 1013 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 EEF2P13639 858 aaKnown RBP10.04□□□□□ -0.8
RPE-216ENST00000454822 CASP1P29466 404 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 CDC25AP30304 524 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 SLC16A2P36021 539 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 DPYDQ12882 1025 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 CCDC96Q2M329 555 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 GPATCH4Q5T3I0 446 aaKnown RBP10.04□□□□□ -0.8
RPE-216ENST00000454822 JAKMIP3Q5VZ66 844 aa10.04□□□□□ -0.8
RPE-216ENST00000454822 PDXDC2PQ6P474 469 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms