RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 SYMPKQ92797 1274 aaKnown RBP30.72■■■□□ 2.51
NEK6-211ENST00000454453 NUP88Q99567 741 aaPredicted RBP30.72■■■□□ 2.51
NEK6-211ENST00000454453 BOLA2Q9H3K6 86 aa30.72■■■□□ 2.51
NEK6-211ENST00000454453 DCDC2CA8MYV0 355 aa30.71■■■□□ 2.51
NEK6-211ENST00000454453 ADCY6O43306 1168 aa30.71■■■□□ 2.51
NEK6-211ENST00000454453 TIMP1P01033 207 aa30.71■■■□□ 2.51
NEK6-211ENST00000454453 CTR9Q6PD62 1173 aa30.71■■■□□ 2.51
NEK6-211ENST00000454453 SIRT2Q8IXJ6 389 aa30.71■■■□□ 2.51
NEK6-211ENST00000454453 GOPCQ9HD26 462 aa30.71■■■□□ 2.51
NEK6-211ENST00000454453 CHD9Q3L8U1 2897 aa30.7■■■□□ 2.51
NEK6-211ENST00000454453 DNAJC25-GNG10A0A024R161 153 aa30.7■■■□□ 2.51
NEK6-211ENST00000454453 MOXD2PA6NHM9 499 aa30.7■■■□□ 2.51
NEK6-211ENST00000454453 MAMDC4Q6UXC1 1216 aa30.7■■■□□ 2.51
NEK6-211ENST00000454453 NUP133Q8WUM0 1156 aa30.7■■■□□ 2.51
NEK6-211ENST00000454453 BCL11AQ9H165 835 aa30.7■■■□□ 2.51
NEK6-211ENST00000454453 SYNGAP1Q96PV0 1343 aa30.7■■■□□ 2.5
NEK6-211ENST00000454453 RAD21O60216 631 aa30.69■■■□□ 2.5
NEK6-211ENST00000454453 COPB2P35606 906 aa30.69■■■□□ 2.5
NEK6-211ENST00000454453 TJAP1Q5JTD0 557 aa30.69■■■□□ 2.5
NEK6-211ENST00000454453 MSL3Q8N5Y2 521 aaKnown RBP30.69■■■□□ 2.5
NEK6-211ENST00000454453 TIFAQ96CG3 184 aa30.69■■■□□ 2.5
NEK6-211ENST00000454453 FAM184BQ9ULE4 1060 aa30.69■■■□□ 2.5
NEK6-211ENST00000454453 PBX2P40425 430 aa30.68■■■□□ 2.5
NEK6-211ENST00000454453 CDK7P50613 346 aa30.68■■■□□ 2.5
NEK6-211ENST00000454453 SNRNP48Q6IEG0 339 aaKnown RBP30.68■■■□□ 2.5
NEK6-211ENST00000454453 SLC4A4Q9Y6R1 1079 aa30.68■■■□□ 2.5
NEK6-211ENST00000454453 GRXCR1A8MXD5 290 aa30.67■■■□□ 2.5
NEK6-211ENST00000454453 ATP5JP18859 108 aa30.67■■■□□ 2.5
NEK6-211ENST00000454453 TMEM240Q5SV17 173 aa30.67■■■□□ 2.5
NEK6-211ENST00000454453 RASIP1Q5U651 963 aa30.67■■■□□ 2.5
NEK6-211ENST00000454453 MFSD5Q6N075 450 aa30.67■■■□□ 2.5
NEK6-211ENST00000454453 FGD4Q96M96 766 aa30.67■■■□□ 2.5
NEK6-211ENST00000454453 HAUS7Q99871 368 aa30.67■■■□□ 2.5
NEK6-211ENST00000454453 SLF1Q9BQI6 1058 aa30.67■■■□□ 2.5
NEK6-211ENST00000454453 TEX13BQ9BXU2 312 aa30.67■■■□□ 2.5
NEK6-211ENST00000454453 PUS7LQ9H0K6 701 aaKnown RBP30.67■■■□□ 2.5
NEK6-211ENST00000454453 ZHX1Q9UKY1 873 aaPredicted RBP30.67■■■□□ 2.5
NEK6-211ENST00000454453 DUSP11O75319 330 aaKnown RBP30.66■■■□□ 2.5
NEK6-211ENST00000454453 CST5P28325 142 aaPredicted RBP30.66■■■□□ 2.5
NEK6-211ENST00000454453 UBE3CQ15386 1083 aa30.66■■■□□ 2.5
NEK6-211ENST00000454453 PBX4Q9BYU1 374 aa30.66■■■□□ 2.5
NEK6-211ENST00000454453 AMOTL1Q8IY63 956 aa30.65■■■□□ 2.5
NEK6-211ENST00000454453 ELP1O95163 1332 aa30.65■■■□□ 2.5
NEK6-211ENST00000454453 MYH7P12883 1935 aa30.65■■■□□ 2.5
NEK6-211ENST00000454453 ASGR1P07306 291 aa30.64■■■□□ 2.5
NEK6-211ENST00000454453 CSF2RAP15509 400 aa30.64■■■□□ 2.5
NEK6-211ENST00000454453 RASA1P20936 1047 aa30.64■■■□□ 2.5
NEK6-211ENST00000454453 DDX11Q96FC9 970 aa30.64■■■□□ 2.5
NEK6-211ENST00000454453 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.64■■■□□ 2.5
NEK6-211ENST00000454453 NDUFB10O96000 172 aa30.63■■■□□ 2.49
NEK6-211ENST00000454453 ACVR2BQ13705 512 aa30.63■■■□□ 2.49
NEK6-211ENST00000454453 ZNF467Q7Z7K2 595 aaPredicted RBP30.63■■■□□ 2.49
NEK6-211ENST00000454453 GLT1D1Q96MS3 346 aa30.63■■■□□ 2.49
NEK6-211ENST00000454453 UPF3AQ9H1J1 476 aaKnown RBP30.63■■■□□ 2.49
NEK6-211ENST00000454453 F5H6K3 240 aa30.62■■■□□ 2.49
NEK6-211ENST00000454453 ATP2A1O14983 1001 aa30.62■■■□□ 2.49
NEK6-211ENST00000454453 CTAGE5O15320 804 aa30.62■■■□□ 2.49
NEK6-211ENST00000454453 C6orf222P0C671 652 aaPredicted RBP30.62■■■□□ 2.49
NEK6-211ENST00000454453 KLRC3Q07444 240 aa30.62■■■□□ 2.49
NEK6-211ENST00000454453 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.62■■■□□ 2.49
NEK6-211ENST00000454453 RPAP2Q8IXW5 612 aaPredicted RBP30.62■■■□□ 2.49
NEK6-211ENST00000454453 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.62■■■□□ 2.49
NEK6-211ENST00000454453 TNFRSF10AO00220 468 aa30.61■■■□□ 2.49
NEK6-211ENST00000454453 ACRP10323 421 aa30.61■■■□□ 2.49
NEK6-211ENST00000454453 PPIGQ13427 754 aaKnown RBP eCLIP30.61■■■□□ 2.491e-6■■□□□ 13.2
NEK6-211ENST00000454453 FAM126BQ8IXS8 530 aa30.61■■■□□ 2.49
NEK6-211ENST00000454453 CPXCR1Q8N123 301 aa30.61■■■□□ 2.49
NEK6-211ENST00000454453 PRPF38AQ8NAV1 312 aaKnown RBP30.61■■■□□ 2.49
NEK6-211ENST00000454453 PRDM12Q9H4Q4 367 aa30.61■■■□□ 2.49
NEK6-211ENST00000454453 NYAP2Q9P242 653 aa30.61■■■□□ 2.49
NEK6-211ENST00000454453 ARPP21Q9UBL0 812 aaPredicted RBP30.61■■■□□ 2.49
NEK6-211ENST00000454453 MROH7Q68CQ1 1323 aa30.61■■■□□ 2.49
NEK6-211ENST00000454453 MCM3APO60318 1980 aa30.61■■■□□ 2.49
NEK6-211ENST00000454453 SLC4A3P48751 1232 aa30.6■■■□□ 2.49
NEK6-211ENST00000454453 GJA9P57773 515 aa30.6■■■□□ 2.49
NEK6-211ENST00000454453 CCDC144BQ3MJ40 725 aa30.6■■■□□ 2.49
NEK6-211ENST00000454453 ZNF365Q70YC5 407 aa30.6■■■□□ 2.49
NEK6-211ENST00000454453 STK11IPQ8N1F8 1099 aa30.6■■■□□ 2.49
NEK6-211ENST00000454453 PPM1EQ8WY54 764 aa30.6■■■□□ 2.49
NEK6-211ENST00000454453 DDRGK1Q96HY6 314 aa30.6■■■□□ 2.49
NEK6-211ENST00000454453 KATNBL1Q9H079 304 aa30.6■■■□□ 2.49
NEK6-211ENST00000454453 RAVER2Q9HCJ3 691 aaKnown RBP30.6■■■□□ 2.49
NEK6-211ENST00000454453 ARVCFO00192 962 aa30.59■■■□□ 2.49
NEK6-211ENST00000454453 RAB11FIP3O75154 756 aa30.59■■■□□ 2.49
NEK6-211ENST00000454453 ADGRE1Q14246 886 aa30.59■■■□□ 2.49
NEK6-211ENST00000454453 PPP1R12CQ9BZL4 782 aa30.59■■■□□ 2.49
NEK6-211ENST00000454453 IGKV6D-41A0A0C4DH26 115 aa30.58■■■□□ 2.49
NEK6-211ENST00000454453 SBK1Q52WX2 424 aa30.58■■■□□ 2.49
NEK6-211ENST00000454453 CCDC129Q6ZRS4 1044 aa30.58■■■□□ 2.49
NEK6-211ENST00000454453 PCSK9Q8NBP7 692 aaKnown RBP30.58■■■□□ 2.49
NEK6-211ENST00000454453 STRBPQ96SI9 672 aaKnown RBP30.58■■■□□ 2.49
NEK6-211ENST00000454453 ABHD16BQ9H3Z7 469 aa30.58■■■□□ 2.49
NEK6-211ENST00000454453 ZBTB40Q9NUA8 1239 aa30.58■■■□□ 2.49
NEK6-211ENST00000454453 CHD7Q9P2D1 2997 aa30.58■■■□□ 2.49
NEK6-211ENST00000454453 A0A0U1RQG5 324 aaPredicted RBP30.57■■■□□ 2.48
NEK6-211ENST00000454453 GSG1L2A8MUP6 293 aa30.57■■■□□ 2.48
NEK6-211ENST00000454453 CD4P01730 458 aa30.57■■■□□ 2.48
NEK6-211ENST00000454453 HNRNPUQ00839 825 aaKnown RBP eCLIP30.57■■■□□ 2.48
NEK6-211ENST00000454453 ARMCX2Q7L311 632 aa30.57■■■□□ 2.48
NEK6-211ENST00000454453 GAS2L1Q99501 681 aaPredicted RBP30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms