RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 TRIM43BA6NCK2 446 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 MOXD2PA6NHM9 499 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 SMIM22K7EJ46 135 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 ERC2O15083 957 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 NDUFB10O96000 172 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 CHGBP05060 677 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 TSPY3P0CV98 308 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 TSPY8P0CW00 308 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 TAL1P17542 331 aaPredicted RBP9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 SMAD3P84022 425 aaKnown RBP9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 FPGSQ05932 587 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 PPP4R3BQ5MIZ7 849 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 C9orf50Q5SZB4 431 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 SH3RF1Q7Z6J0 888 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 KBTBD3Q8NAB2 608 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 PCSK9Q8NBP7 692 aaKnown RBP9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 TRIM43Q96BQ3 446 aaPredicted RBP9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 GUCD1Q96NT3 240 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 CDX2Q99626 313 aaPredicted RBP9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 SEMA6BQ9H3T3 888 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 FEM1BQ9UK73 627 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 ZNF214Q9UL59 606 aaPredicted RBP9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 SZT2Q5T011 3432 aa9.33□□□□□ -0.92
AC007879.2-201ENST00000454444 MROH7Q68CQ1 1323 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 SYNGAP1Q96PV0 1343 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 CDK5RAP2Q96SN8 1893 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 MYO5AQ9Y4I1 1855 aaKnown RBP9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 GSG1L2A8MUP6 293 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 PATL2C9JE40 543 aaKnown RBP9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 GPAA1O43292 621 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 PRDM1O75626 825 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 TTLL1O95922 423 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 C6orf222P0C671 652 aaPredicted RBP9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 ZNF865P0CJ78 1059 aaPredicted RBP9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 FDX1P10109 184 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 RASA1P20936 1047 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 ACLYP53396 1101 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 ACVR2BQ13705 512 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 KCNA10Q16322 511 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 CHST13Q8NET6 341 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 MAFAQ8NHW3 353 aaPredicted RBP9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 CHURC1Q8WUH1 139 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 TOX2Q96NM4 488 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 NAPBQ9H115 298 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 ABHD16BQ9H3Z7 469 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 RAVER2Q9HCJ3 691 aaKnown RBP9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 ALPK3Q96L96 1907 aa9.32□□□□□ -0.92
AC007879.2-201ENST00000454444 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 ATP2A1O14983 1001 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 KIAA0355O15063 1070 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 TLR3O15455 904 aaKnown RBP9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 DUSP11O75319 330 aaKnown RBP9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 BMP3P12645 472 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 FOSL2P15408 326 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 SLC1A4P43007 532 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 GNASQ5JWF2 1037 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 SLFN13Q68D06 897 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 MAMDC4Q6UXC1 1216 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 CCDC129Q6ZRS4 1044 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 ZNF467Q7Z7K2 595 aaPredicted RBP9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 IFNL3Q8IZI9 196 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 LRRC47Q8N1G4 583 aaKnown RBP9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 REPS2Q8NFH8 660 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 OSBP2Q969R2 916 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 LENG1Q96BZ8 264 aaPredicted RBP9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 CEP95Q96GE4 821 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 FSD1Q9BTV5 496 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 HOMER2Q9NSB8 354 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 MTMR4Q9NYA4 1195 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 SYNPO2Q9UMS6 1093 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 NAV1Q8NEY1 1877 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 ELP1O95163 1332 aa9.31□□□□□ -0.92
AC007879.2-201ENST00000454444 TMEM265A0A087WTH1 108 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 ASB14A6NK59 587 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 TMEM232C9JQI7 657 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 ZEB2O60315 1214 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 SNAI1O95863 264 aaPredicted RBP9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 TIMP1P01033 207 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 STAT2P52630 851 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 OAZ1P54368 228 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 TFAP4Q01664 338 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 PPIGQ13427 754 aaKnown RBP eCLIP9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 TSHZ3Q63HK5 1081 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 ANKRD33Q7Z3H0 272 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 FAM160B2Q86V87 743 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 TMEM199Q8N511 208 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 GMCL1P1Q8NEA9 526 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 MKL1Q969V6 931 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 COL25A1Q9BXS0 654 aaPredicted RBP9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 AP5M1Q9H0R1 490 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 DCTPP1Q9H773 170 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 ACAD9Q9H845 621 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 SLC38A10Q9HBR0 1119 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 STX8Q9UNK0 236 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 RIPK3Q9Y572 518 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 SYNRGQ9UMZ2 1314 aa9.3□□□□□ -0.92
AC007879.2-201ENST00000454444 ROBO3Q96MS0 1386 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms