RNA–Protein interactions for RNA: ENST00000453835.1

CR559946.1-201, humanhuman

TSL 4 BASIC

Gene CR559946.1, Length 531 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR559946.1-201ENST00000453835 CDX2Q99626 313 aaPredicted RBP20.27■□□□□ 0.84
CR559946.1-201ENST00000453835 CHMP4BQ9H444 224 aaKnown RBP20.27■□□□□ 0.84
CR559946.1-201ENST00000453835 MKNK2Q9HBH9 465 aa20.27■□□□□ 0.84
CR559946.1-201ENST00000453835 NYAP2Q9P242 653 aa20.27■□□□□ 0.84
CR559946.1-201ENST00000453835 ROBO3Q96MS0 1386 aa20.26■□□□□ 0.83
CR559946.1-201ENST00000453835 ADAMTS4O75173 837 aa20.26■□□□□ 0.83
CR559946.1-201ENST00000453835 SNAI1O95863 264 aaPredicted RBP20.26■□□□□ 0.83
CR559946.1-201ENST00000453835 AKR1A1P14550 325 aa20.26■□□□□ 0.83
CR559946.1-201ENST00000453835 SLC4A3P48751 1232 aa20.26■□□□□ 0.83
CR559946.1-201ENST00000453835 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.26■□□□□ 0.83
CR559946.1-201ENST00000453835 COL25A1Q9BXS0 654 aaPredicted RBP20.26■□□□□ 0.83
CR559946.1-201ENST00000453835 TEX13BQ9BXU2 312 aa20.26■□□□□ 0.83
CR559946.1-201ENST00000453835 SEMA6BQ9H3T3 888 aa20.26■□□□□ 0.83
CR559946.1-201ENST00000453835 CLIP2Q9UDT6 1046 aa20.26■□□□□ 0.83
CR559946.1-201ENST00000453835 IGKV6D-41A0A0C4DH26 115 aa20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 PQBP1O60828 265 aaKnown RBP20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 PRDM1O75626 825 aa20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 CLTBP09497 229 aa20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 COPB2P35606 906 aa20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 IRX5P78411 483 aaPredicted RBP20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 GIMAP6Q6P9H5 292 aa20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 CPXCR1Q8N123 301 aa20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 APPBP2Q92624 585 aa20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 TTYH1Q9H313 450 aaPredicted RBP20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 CNPY2Q9Y2B0 182 aa20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 TACC3Q9Y6A5 838 aa20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 SYNRGQ9UMZ2 1314 aa20.25■□□□□ 0.83
CR559946.1-201ENST00000453835 DNAJC25-GNG10A0A024R161 153 aa20.24■□□□□ 0.83
CR559946.1-201ENST00000453835 MYADML2A6NDP7 307 aa20.24■□□□□ 0.83
CR559946.1-201ENST00000453835 M0R2C6 588 aa20.24■□□□□ 0.83
CR559946.1-201ENST00000453835 RNF113AO15541 343 aaKnown RBP20.24■□□□□ 0.83
CR559946.1-201ENST00000453835 GPAA1O43292 621 aa20.24■□□□□ 0.83
CR559946.1-201ENST00000453835 PRPF38AQ8NAV1 312 aaKnown RBP20.24■□□□□ 0.83
CR559946.1-201ENST00000453835 DDX11Q96FC9 970 aa20.24■□□□□ 0.83
CR559946.1-201ENST00000453835 RAVER2Q9HCJ3 691 aaKnown RBP20.24■□□□□ 0.83
CR559946.1-201ENST00000453835 SPTBN5Q9NRC6 3674 aaKnown RBP20.24■□□□□ 0.83
CR559946.1-201ENST00000453835 KIAA0355O15063 1070 aa20.23■□□□□ 0.83
CR559946.1-201ENST00000453835 ACLYP53396 1101 aa20.23■□□□□ 0.83
CR559946.1-201ENST00000453835 SMAD3P84022 425 aaKnown RBP20.23■□□□□ 0.83
CR559946.1-201ENST00000453835 MAMDC4Q6UXC1 1216 aa20.23■□□□□ 0.83
CR559946.1-201ENST00000453835 KLHDC9Q8NEP7 349 aa20.23■□□□□ 0.83
CR559946.1-201ENST00000453835 KIFC2Q96AC6 838 aa20.23■□□□□ 0.83
CR559946.1-201ENST00000453835 CEP95Q96GE4 821 aa20.23■□□□□ 0.83
CR559946.1-201ENST00000453835 FGD4Q96M96 766 aa20.23■□□□□ 0.83
CR559946.1-201ENST00000453835 ZHX1Q9UKY1 873 aaPredicted RBP20.23■□□□□ 0.83
CR559946.1-201ENST00000453835 SYNGAP1Q96PV0 1343 aa20.23■□□□□ 0.83
CR559946.1-201ENST00000453835 ATP2A1O14983 1001 aa20.22■□□□□ 0.83
CR559946.1-201ENST00000453835 ADCY6O43306 1168 aa20.22■□□□□ 0.83
CR559946.1-201ENST00000453835 RAG1P15918 1043 aa20.22■□□□□ 0.83
CR559946.1-201ENST00000453835 FAAP100Q0VG06 881 aa20.22■□□□□ 0.83
CR559946.1-201ENST00000453835 CCSAPQ6IQ19 270 aaPredicted RBP20.22■□□□□ 0.83
CR559946.1-201ENST00000453835 LRRC47Q8N1G4 583 aaKnown RBP20.22■□□□□ 0.83
CR559946.1-201ENST00000453835 MYLIPQ8WY64 445 aa20.22■□□□□ 0.83
CR559946.1-201ENST00000453835 DCTPP1Q9H773 170 aa20.22■□□□□ 0.83
CR559946.1-201ENST00000453835 TMEM39AQ9NV64 488 aa20.22■□□□□ 0.83
CR559946.1-201ENST00000453835 FAM184BQ9ULE4 1060 aa20.22■□□□□ 0.83
CR559946.1-201ENST00000453835 MYH4Q9Y623 1939 aa20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 ZBED4O75132 1171 aa20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 TDO2P48775 406 aa20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 KCNA10Q16322 511 aa20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 ZNF444Q8N0Y2 327 aaPredicted RBP20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 MSL3Q8N5Y2 521 aaKnown RBP20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 MKL1Q969V6 931 aa20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 RNPC3Q96LT9 517 aaKnown RBP20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 SEC62Q99442 399 aaKnown RBP20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 TSEN34Q9BSV6 310 aaKnown RBP20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 SLC38A10Q9HBR0 1119 aa20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 STARD7Q9NQZ5 370 aa20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 MTMR4Q9NYA4 1195 aa20.21■□□□□ 0.83
CR559946.1-201ENST00000453835 APPP05067 770 aa20.2■□□□□ 0.82
CR559946.1-201ENST00000453835 ANKRD33Q7Z3H0 272 aa20.2■□□□□ 0.82
CR559946.1-201ENST00000453835 IFNL3Q8IZI9 196 aa20.2■□□□□ 0.82
CR559946.1-201ENST00000453835 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.2■□□□□ 0.82
CR559946.1-201ENST00000453835 DUSP11O75319 330 aaKnown RBP20.19■□□□□ 0.82
CR559946.1-201ENST00000453835 FPGSQ05932 587 aa20.19■□□□□ 0.82
CR559946.1-201ENST00000453835 ACVR2BQ13705 512 aa20.19■□□□□ 0.82
CR559946.1-201ENST00000453835 ZNF467Q7Z7K2 595 aaPredicted RBP20.19■□□□□ 0.82
CR559946.1-201ENST00000453835 MAFAQ8NHW3 353 aaPredicted RBP20.19■□□□□ 0.82
CR559946.1-201ENST00000453835 CHMP4CQ96CF2 233 aa20.19■□□□□ 0.82
CR559946.1-201ENST00000453835 FEM1BQ9UK73 627 aa20.19■□□□□ 0.82
CR559946.1-201ENST00000453835 CTDP1Q9Y5B0 961 aaPredicted RBP20.19■□□□□ 0.82
CR559946.1-201ENST00000453835 MCM3APO60318 1980 aa20.19■□□□□ 0.82
CR559946.1-201ENST00000453835 MOXD2PA6NHM9 499 aa20.18■□□□□ 0.82
CR559946.1-201ENST00000453835 PATL2C9JE40 543 aaKnown RBP20.18■□□□□ 0.82
CR559946.1-201ENST00000453835 ZFYP08048 801 aaPredicted RBP20.18■□□□□ 0.82
CR559946.1-201ENST00000453835 GNAT2P19087 354 aa20.18■□□□□ 0.82
CR559946.1-201ENST00000453835 CCDC144BQ3MJ40 725 aa20.18■□□□□ 0.82
CR559946.1-201ENST00000453835 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.18■□□□□ 0.82
CR559946.1-201ENST00000453835 ANKRD35Q8N283 1001 aa20.18■□□□□ 0.82
CR559946.1-201ENST00000453835 NUP133Q8WUM0 1156 aa20.18■□□□□ 0.82
CR559946.1-201ENST00000453835 GPATCH3Q96I76 525 aa20.18■□□□□ 0.82
CR559946.1-201ENST00000453835 TOX2Q96NM4 488 aa20.18■□□□□ 0.82
CR559946.1-201ENST00000453835 HOMER2Q9NSB8 354 aa20.18■□□□□ 0.82
CR559946.1-201ENST00000453835 DCDC2CA8MYV0 355 aa20.17■□□□□ 0.82
CR559946.1-201ENST00000453835 TTLL1O95922 423 aa20.17■□□□□ 0.82
CR559946.1-201ENST00000453835 C6orf222P0C671 652 aaPredicted RBP20.17■□□□□ 0.82
CR559946.1-201ENST00000453835 CNTN2Q02246 1040 aa20.17■□□□□ 0.82
CR559946.1-201ENST00000453835 SLFN13Q68D06 897 aa20.17■□□□□ 0.82
CR559946.1-201ENST00000453835 ARMCX2Q7L311 632 aa20.17■□□□□ 0.82
CR559946.1-201ENST00000453835 GMCL1P1Q8NEA9 526 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms