RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 RBM28Q9NW13 759 aaKnown RBP9.74□□□□□ -0.85
LMO3-210ENST00000453727 TAOK2Q9UL54 1235 aa9.74□□□□□ -0.85
LMO3-210ENST00000453727 ZNF215Q9UL58 517 aaPredicted RBP9.74□□□□□ -0.85
LMO3-210ENST00000453727 SCAF8Q9UPN6 1271 aaKnown RBP9.74□□□□□ -0.85
LMO3-210ENST00000453727 PLIN4Q96Q06 1357 aa9.74□□□□□ -0.85
LMO3-210ENST00000453727 GREB1LQ9C091 1923 aaPredicted RBP9.73□□□□□ -0.85
LMO3-210ENST00000453727 PTGS1P23219 599 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 EPS15P42566 896 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 FUT2Q10981 343 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 CCDC91Q7Z6B0 441 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 USP48Q86UV5 1035 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 FAM83AQ86UY5 434 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 DRC7Q8IY82 874 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 CTCFLQ8NI51 663 aaPredicted RBP9.73□□□□□ -0.85
LMO3-210ENST00000453727 FAM151AQ8WW52 585 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 TMEM39BQ9GZU3 492 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 ZSCAN16Q9H4T2 348 aaPredicted RBP9.73□□□□□ -0.85
LMO3-210ENST00000453727 ZNF446Q9NWS9 450 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.73□□□□□ -0.85
LMO3-210ENST00000453727 V9GYY5 206 aaPredicted RBP9.73□□□□□ -0.85
LMO3-210ENST00000453727 CNTNAP1P78357 1384 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 ASTN2O75129 1339 aaPredicted RBP9.73□□□□□ -0.85
LMO3-210ENST00000453727 SATB1Q01826 763 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 ELF2Q15723 593 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 TTC31Q49AM3 519 aaPredicted RBP9.73□□□□□ -0.85
LMO3-210ENST00000453727 DPY19L2Q6NUT2 758 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 TMTC3Q6ZXV5 915 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 FOXP4Q8IVH2 680 aaPredicted RBP9.73□□□□□ -0.85
LMO3-210ENST00000453727 TRIM22Q8IYM9 498 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 MNS1Q8NEH6 495 aa9.73□□□□□ -0.85
LMO3-210ENST00000453727 IGKV6D-41A0A0C4DH26 115 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 FIBPO43427 364 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 NOVP48745 357 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 TNFAIP1Q13829 316 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 KRT40Q6A162 431 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 CLEC10AQ8IUN9 316 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 SRBD1Q8N5C6 995 aaKnown RBP9.72□□□□□ -0.85
LMO3-210ENST00000453727 TRPM4Q8TD43 1214 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 HACL1Q9UJ83 578 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 MTMR7Q9Y216 660 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 COL2A1P02458 1487 aaPredicted RBP9.72□□□□□ -0.85
LMO3-210ENST00000453727 BAZ2BQ9UIF8 2168 aaKnown RBP9.72□□□□□ -0.85
LMO3-210ENST00000453727 hCG_1642624A0A1W2PR95 340 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 POLR3GO15318 223 aaPredicted RBP9.72□□□□□ -0.85
LMO3-210ENST00000453727 KIF1CO43896 1103 aaKnown RBP9.72□□□□□ -0.85
LMO3-210ENST00000453727 GADD45BO75293 160 aaPredicted RBP9.72□□□□□ -0.85
LMO3-210ENST00000453727 DEXIO95424 95 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 LMOD1P29536 600 aaPredicted RBP9.72□□□□□ -0.85
LMO3-210ENST00000453727 TNNI2P48788 182 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 KRT85P78386 507 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 RASA3Q14644 834 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 RASGRP2Q7LDG7 609 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 CDAN1Q8IWY9 1227 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 STAG2Q8N3U4 1231 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 TMEM87AQ8NBN3 555 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 MAP3K14Q99558 947 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 RNF26Q9BY78 433 aaPredicted RBP9.72□□□□□ -0.85
LMO3-210ENST00000453727 MTMR4Q9NYA4 1195 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 DONSONQ9NYP3 566 aa9.72□□□□□ -0.85
LMO3-210ENST00000453727 CNTNAP5Q8WYK1 1306 aa9.71□□□□□ -0.85
LMO3-210ENST00000453727 KIF28PB7ZC32 967 aa9.71□□□□□ -0.85
LMO3-210ENST00000453727 MPHOSPH10O00566 681 aaKnown RBP9.71□□□□□ -0.85
LMO3-210ENST00000453727 PRPF3O43395 683 aaKnown RBP9.71□□□□□ -0.85
LMO3-210ENST00000453727 TOP1P11387 765 aaKnown RBP9.71□□□□□ -0.85
LMO3-210ENST00000453727 GRM4Q14833 912 aa9.71□□□□□ -0.85
LMO3-210ENST00000453727 PKN1Q16512 942 aa9.71□□□□□ -0.85
LMO3-210ENST00000453727 SHROOM1Q2M3G4 852 aaPredicted RBP9.71□□□□□ -0.85
LMO3-210ENST00000453727 TATDN1Q6P1N9 297 aa9.71□□□□□ -0.85
LMO3-210ENST00000453727 CCDC186Q7Z3E2 898 aa9.71□□□□□ -0.85
LMO3-210ENST00000453727 SRLQ86TD4 932 aa9.71□□□□□ -0.85
LMO3-210ENST00000453727 METTL16Q86W50 562 aaKnown RBP9.71□□□□□ -0.85
LMO3-210ENST00000453727 EGFL6Q8IUX8 553 aa9.71□□□□□ -0.85
LMO3-210ENST00000453727 WASF1Q92558 559 aa9.71□□□□□ -0.85
LMO3-210ENST00000453727 TFIP11Q9UBB9 837 aaKnown RBP9.71□□□□□ -0.85
LMO3-210ENST00000453727 MAD2L2Q9UI95 211 aa9.71□□□□□ -0.85
LMO3-210ENST00000453727 LCMT1Q9UIC8 334 aa9.71□□□□□ -0.85
LMO3-210ENST00000453727 V9GY48 417 aaPredicted RBP9.71□□□□□ -0.85
LMO3-210ENST00000453727 MYH4Q9Y623 1939 aa9.71□□□□□ -0.86
LMO3-210ENST00000453727 SLU7O95391 586 aaKnown RBP9.71□□□□□ -0.86
LMO3-210ENST00000453727 ATP2B1P20020 1258 aa9.71□□□□□ -0.86
LMO3-210ENST00000453727 KIF5BP33176 963 aa9.71□□□□□ -0.86
LMO3-210ENST00000453727 HIRAP54198 1017 aaPredicted RBP9.71□□□□□ -0.86
LMO3-210ENST00000453727 KIF23Q02241 960 aaPredicted RBP9.71□□□□□ -0.86
LMO3-210ENST00000453727 CERKLQ49MI3 558 aaPredicted RBP9.71□□□□□ -0.86
LMO3-210ENST00000453727 ANGEL2Q5VTE6 544 aaKnown RBP9.71□□□□□ -0.86
LMO3-210ENST00000453727 HERC5Q9UII4 1024 aaKnown RBP9.71□□□□□ -0.86
LMO3-210ENST00000453727 RRP15Q9Y3B9 282 aaKnown RBP9.71□□□□□ -0.86
LMO3-210ENST00000453727 AKAP17AQ02040 695 aaKnown RBP9.7□□□□□ -0.86
LMO3-210ENST00000453727 TRIM29Q14134 588 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 PTPN14Q15678 1187 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 MIGA2Q7L4E1 593 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 GOLGA5Q8TBA6 731 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 SHISA4Q96DD7 197 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 CCDC17Q96LX7 622 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 DEFB129Q9H1M3 183 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 CXorf56Q9H5V9 222 aa9.7□□□□□ -0.86
LMO3-210ENST00000453727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.7□□□□□ -0.86
LMO3-210ENST00000453727 ZC3H4Q9UPT8 1303 aaKnown RBP9.7□□□□□ -0.86
LMO3-210ENST00000453727 PALM3A6NDB9 673 aaPredicted RBP9.7□□□□□ -0.86
LMO3-210ENST00000453727 GDF11O95390 407 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms