RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 SLC1A4P43007 532 aa35.46■■■■□ 3.27
CCDC117-206ENST00000453543 PRPF38BQ5VTL8 546 aaKnown RBP35.46■■■■□ 3.27
CCDC117-206ENST00000453543 MFSD14CQ5VZR4 134 aa35.46■■■■□ 3.27
CCDC117-206ENST00000453543 RNF41Q9H4P4 317 aaPredicted RBP35.46■■■■□ 3.27
CCDC117-206ENST00000453543 TMEM232C9JQI7 657 aa35.45■■■■□ 3.27
CCDC117-206ENST00000453543 CHMLP26374 656 aa35.45■■■■□ 3.27
CCDC117-206ENST00000453543 SNRNP48Q6IEG0 339 aaKnown RBP35.45■■■■□ 3.27
CCDC117-206ENST00000453543 TEX13BQ9BXU2 312 aa35.45■■■■□ 3.27
CCDC117-206ENST00000453543 SLC38A10Q9HBR0 1119 aa35.45■■■■□ 3.27
CCDC117-206ENST00000453543 TCP11L1Q9NUJ3 509 aa35.45■■■■□ 3.27
CCDC117-206ENST00000453543 MTMR7Q9Y216 660 aa35.45■■■■□ 3.27
CCDC117-206ENST00000453543 ZNFX1Q9P2E3 1918 aaKnown RBP35.45■■■■□ 3.27
CCDC117-206ENST00000453543 RAD50Q92878 1312 aa35.44■■■■□ 3.26
CCDC117-206ENST00000453543 ZBED4O75132 1171 aa35.44■■■■□ 3.26
CCDC117-206ENST00000453543 IGHA2P01877 340 aa35.44■■■■□ 3.26
CCDC117-206ENST00000453543 CYP2C19P33261 490 aa35.44■■■■□ 3.26
CCDC117-206ENST00000453543 KCTD1Q719H9 257 aa35.44■■■■□ 3.26
CCDC117-206ENST00000453543 CPXCR1Q8N123 301 aa35.44■■■■□ 3.26
CCDC117-206ENST00000453543 MMP19Q99542 508 aa35.44■■■■□ 3.26
CCDC117-206ENST00000453543 RIPK3Q9Y572 518 aa35.44■■■■□ 3.26
CCDC117-206ENST00000453543 STAT2P52630 851 aa35.43■■■■□ 3.26
CCDC117-206ENST00000453543 RAVER2Q9HCJ3 691 aaKnown RBP35.43■■■■□ 3.26
CCDC117-206ENST00000453543 CTDP1Q9Y5B0 961 aaPredicted RBP35.43■■■■□ 3.26
CCDC117-206ENST00000453543 ATP2A1O14983 1001 aa35.42■■■■□ 3.26
CCDC117-206ENST00000453543 COPB2P35606 906 aa35.42■■■■□ 3.26
CCDC117-206ENST00000453543 TMEM47Q9BQJ4 181 aa35.42■■■■□ 3.26
CCDC117-206ENST00000453543 TOP1P11387 765 aaKnown RBP35.41■■■■□ 3.26
CCDC117-206ENST00000453543 CAPN2P17655 700 aa35.41■■■■□ 3.26
CCDC117-206ENST00000453543 SLC4A3P48751 1232 aa35.41■■■■□ 3.26
CCDC117-206ENST00000453543 IKQ13123 557 aaPredicted RBP35.41■■■■□ 3.26
CCDC117-206ENST00000453543 IMMTQ16891 758 aaKnown RBP35.41■■■■□ 3.26
CCDC117-206ENST00000453543 OLFML2BQ68BL8 750 aa35.41■■■■□ 3.26
CCDC117-206ENST00000453543 RCSD1Q6JBY9 416 aa35.41■■■■□ 3.26
CCDC117-206ENST00000453543 ESR2Q92731 530 aa35.41■■■■□ 3.26
CCDC117-206ENST00000453543 CTNNA3Q9UI47 895 aa35.41■■■■□ 3.26
CCDC117-206ENST00000453543 PGK2P07205 417 aa35.4■■■■□ 3.26
CCDC117-206ENST00000453543 FAM160B2Q86V87 743 aa35.4■■■■□ 3.26
CCDC117-206ENST00000453543 SKAP1Q86WV1 359 aa35.4■■■■□ 3.26
CCDC117-206ENST00000453543 CHURC1Q8WUH1 139 aa35.4■■■■□ 3.26
CCDC117-206ENST00000453543 RUFY2Q8WXA3 655 aa35.4■■■■□ 3.26
CCDC117-206ENST00000453543 SLC5A4Q9NY91 659 aa35.4■■■■□ 3.26
CCDC117-206ENST00000453543 KCTD2Q14681 263 aa35.39■■■■□ 3.26
CCDC117-206ENST00000453543 CCDC96Q2M329 555 aa35.39■■■■□ 3.26
CCDC117-206ENST00000453543 CENPQQ7L2Z9 268 aaPredicted RBP35.39■■■■□ 3.26
CCDC117-206ENST00000453543 DIS3LQ8TF46 1054 aaKnown RBP35.39■■■■□ 3.26
CCDC117-206ENST00000453543 MAML3Q96JK9 1138 aa35.39■■■■□ 3.26
CCDC117-206ENST00000453543 ZKSCAN3Q9BRR0 538 aa35.39■■■■□ 3.26
CCDC117-206ENST00000453543 OGDHLQ9ULD0 1010 aa35.39■■■■□ 3.26
CCDC117-206ENST00000453543 TRPV1Q8NER1 839 aa35.38■■■■□ 3.25
CCDC117-206ENST00000453543 DCAF4Q8WV16 495 aa35.38■■■■□ 3.25
CCDC117-206ENST00000453543 PLXNA1Q9UIW2 1896 aa35.37■■■■□ 3.25
CCDC117-206ENST00000453543 FRMPD3Q5JV73 1810 aa35.37■■■■□ 3.25
CCDC117-206ENST00000453543 B4E1Z4 1266 aa35.37■■■■□ 3.25
CCDC117-206ENST00000453543 PLA2G6O60733 806 aa35.37■■■■□ 3.25
CCDC117-206ENST00000453543 KDM4AO75164 1064 aa35.37■■■■□ 3.25
CCDC117-206ENST00000453543 LHX8Q68G74 356 aa35.37■■■■□ 3.25
CCDC117-206ENST00000453543 PAWRQ96IZ0 340 aaKnown RBP35.37■■■■□ 3.25
CCDC117-206ENST00000453543 CYBAP13498 195 aa35.36■■■■□ 3.25
CCDC117-206ENST00000453543 MNX1P50219 401 aaPredicted RBP35.36■■■■□ 3.25
CCDC117-206ENST00000453543 OAZ1P54368 228 aa35.36■■■■□ 3.25
CCDC117-206ENST00000453543 PTH1RQ03431 593 aa35.36■■■■□ 3.25
CCDC117-206ENST00000453543 ANKLE1Q8NAG6 615 aa35.36■■■■□ 3.25
CCDC117-206ENST00000453543 TTC14Q96N46 770 aa35.36■■■■□ 3.25
CCDC117-206ENST00000453543 FDX1P10109 184 aa35.35■■■■□ 3.25
CCDC117-206ENST00000453543 SNAP25P60880 206 aa35.35■■■■□ 3.25
CCDC117-206ENST00000453543 ZNF792Q3KQV3 632 aa35.35■■■■□ 3.25
CCDC117-206ENST00000453543 PRR12Q9ULL5 1215 aa35.35■■■■□ 3.25
CCDC117-206ENST00000453543 SGSM2O43147 1006 aa35.34■■■■□ 3.25
CCDC117-206ENST00000453543 CNGA1P29973 690 aa35.34■■■■□ 3.25
CCDC117-206ENST00000453543 TTBK2Q6IQ55 1244 aa35.34■■■■□ 3.25
CCDC117-206ENST00000453543 ZNF536O15090 1300 aa35.33■■■■□ 3.25
CCDC117-206ENST00000453543 FRMPD2Q68DX3 1309 aaPredicted RBP35.33■■■■□ 3.25
CCDC117-206ENST00000453543 HTATIP2Q9BUP3 242 aa35.33■■■■□ 3.25
CCDC117-206ENST00000453543 PDHBP11177 359 aa35.32■■■■□ 3.24
CCDC117-206ENST00000453543 SLC16A2P36021 539 aa35.32■■■■□ 3.24
CCDC117-206ENST00000453543 NT5C2P49902 561 aa35.32■■■■□ 3.24
CCDC117-206ENST00000453543 PRAMEF19Q5SWL8 479 aa35.32■■■■□ 3.24
CCDC117-206ENST00000453543 NECAB2Q7Z6G3 386 aa35.32■■■■□ 3.24
CCDC117-206ENST00000453543 DPF3Q92784 378 aa35.32■■■■□ 3.24
CCDC117-206ENST00000453543 AGBL1Q96MI9 1066 aa35.32■■■■□ 3.24
CCDC117-206ENST00000453543 HOMER2Q9NSB8 354 aa35.32■■■■□ 3.24
CCDC117-206ENST00000453543 DDX20Q9UHI6 824 aaKnown RBP35.32■■■■□ 3.24
CCDC117-206ENST00000453543 IQCA1Q86XH1 822 aa35.31■■■■□ 3.24
CCDC117-206ENST00000453543 CHST13Q8NET6 341 aa35.31■■■■□ 3.24
CCDC117-206ENST00000453543 GPCPD1Q9NPB8 672 aa35.31■■■■□ 3.24
CCDC117-206ENST00000453543 ZSWIM5Q9P217 1185 aa35.31■■■■□ 3.24
CCDC117-206ENST00000453543 DIS3Q9Y2L1 958 aaKnown RBP35.31■■■■□ 3.24
CCDC117-206ENST00000453543 DNAJC25-GNG10A0A024R161 153 aa35.3■■■■□ 3.24
CCDC117-206ENST00000453543 CCDC174Q6PII3 467 aa35.3■■■■□ 3.24
CCDC117-206ENST00000453543 DHX30Q7L2E3 1194 aaKnown RBP eCLIP35.3■■■■□ 3.24
CCDC117-206ENST00000453543 DGKHQ86XP1 1220 aa35.3■■■■□ 3.24
CCDC117-206ENST00000453543 DDX11Q96FC9 970 aa35.3■■■■□ 3.24
CCDC117-206ENST00000453543 KRT23Q9C075 422 aa35.3■■■■□ 3.24
CCDC117-206ENST00000453543 CNNM2Q9H8M5 875 aa35.3■■■■□ 3.24
CCDC117-206ENST00000453543 BTNL9Q6UXG8 535 aa35.29■■■■□ 3.24
CCDC117-206ENST00000453543 ZSCAN10Q96SZ4 725 aaPredicted RBP35.29■■■■□ 3.24
CCDC117-206ENST00000453543 FBXO40Q9UH90 709 aa35.29■■■■□ 3.24
CCDC117-206ENST00000453543 CEP290O15078 2479 aa35.29■■■■□ 3.24
CCDC117-206ENST00000453543 SYDE2Q5VT97 1194 aa35.28■■■■□ 3.24
CCDC117-206ENST00000453543 TINF2Q9BSI4 451 aa35.28■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms