RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 RRP12Q5JTH9 1297 aaKnown RBP10.25□□□□□ -0.77
COL28A1-205ENST00000453441 DGKHQ86XP1 1220 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 KCNB2Q92953 911 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 MKL1Q969V6 931 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.25□□□□□ -0.77
COL28A1-205ENST00000453441 CFHR5Q9BXR6 569 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 MTMR4Q9NYA4 1195 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 AGTPBP1Q9UPW5 1226 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 NEDD4P46934 1319 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 WDR19Q8NEZ3 1342 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 ERICH2A1L162 156 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 AOC2O75106 756 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 KDM4AO75164 1064 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 EEF2P13639 858 aaKnown RBP10.24□□□□□ -0.77
COL28A1-205ENST00000453441 PSMA5P28066 241 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 MCM5P33992 734 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 ANAPC15P60006 121 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 MTMR2Q13614 643 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 FAM47AQ5JRC9 791 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 STK11IPQ8N1F8 1099 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 GMCL1P1Q8NEA9 526 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 GTF3C2Q8WUA4 911 aaPredicted RBP10.24□□□□□ -0.77
COL28A1-205ENST00000453441 BRI3BPQ8WY22 251 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 ANKS1AQ92625 1134 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 CEP95Q96GE4 821 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 UBAC1Q9BSL1 405 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 VCPKMTQ9H867 229 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 MYH4Q9Y623 1939 aa10.24□□□□□ -0.77
COL28A1-205ENST00000453441 B4E1Z4 1266 aa10.23□□□□□ -0.77
COL28A1-205ENST00000453441 WDR46O15213 610 aaKnown RBP10.23□□□□□ -0.77
COL28A1-205ENST00000453441 TOP1P11387 765 aaKnown RBP10.23□□□□□ -0.77
COL28A1-205ENST00000453441 HOXA7P31268 230 aaPredicted RBP10.23□□□□□ -0.77
COL28A1-205ENST00000453441 HMGCS2P54868 508 aa10.23□□□□□ -0.77
COL28A1-205ENST00000453441 MOGSQ13724 837 aa10.23□□□□□ -0.77
COL28A1-205ENST00000453441 NOM1Q5C9Z4 860 aaKnown RBP10.23□□□□□ -0.77
COL28A1-205ENST00000453441 RCSD1Q6JBY9 416 aa10.23□□□□□ -0.77
COL28A1-205ENST00000453441 GADL1Q6ZQY3 521 aa10.23□□□□□ -0.77
COL28A1-205ENST00000453441 TMTC2Q8N394 836 aa10.23□□□□□ -0.77
COL28A1-205ENST00000453441 IL27Q8NEV9 243 aa10.23□□□□□ -0.77
COL28A1-205ENST00000453441 TMEM87BQ96K49 555 aa10.23□□□□□ -0.77
COL28A1-205ENST00000453441 ZSCAN10Q96SZ4 725 aaPredicted RBP10.23□□□□□ -0.77
COL28A1-205ENST00000453441 PARK7Q99497 189 aaKnown RBP10.23□□□□□ -0.77
COL28A1-205ENST00000453441 PRR14Q9BWN1 585 aa10.23□□□□□ -0.77
COL28A1-205ENST00000453441 USP26Q9BXU7 913 aa10.23□□□□□ -0.77
COL28A1-205ENST00000453441 UPF2Q9HAU5 1272 aaKnown RBP10.23□□□□□ -0.77
COL28A1-205ENST00000453441 ZSWIM5Q9P217 1185 aa10.23□□□□□ -0.77
COL28A1-205ENST00000453441 STX8Q9UNK0 236 aa10.23□□□□□ -0.77
COL28A1-205ENST00000453441 A0A1W2PRG0 241 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 USP17L15C9J2P7 530 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 BTBD19C9JJ37 291 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 USP17L13C9JLJ4 530 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 USP17L11C9JVI0 530 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 USP17L18D6R9N7 530 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 USP17L22D6RA61 530 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 USP17L17D6RBQ6 530 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 USP17L19D6RCP7 530 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 USP17L20D6RJB6 530 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 ATP2B2Q01814 1243 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 USP17L24Q0WX57 530 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 C8orf34Q49A92 452 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 CCDC84Q86UT8 332 aaPredicted RBP10.22□□□□□ -0.77
COL28A1-205ENST00000453441 SIAH1Q8IUQ4 282 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 MB21D2Q8IYB1 491 aaPredicted RBP10.22□□□□□ -0.77
COL28A1-205ENST00000453441 ACER1Q8TDN7 264 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 NEK1Q96PY6 1258 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 TM6SF1Q9BZW5 370 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 ZFYVE28Q9HCC9 887 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 IL17RBQ9NRM6 502 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.22□□□□□ -0.77
COL28A1-205ENST00000453441 CLIP2Q9UDT6 1046 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 DAXXQ9UER7 740 aaPredicted RBP10.22□□□□□ -0.77
COL28A1-205ENST00000453441 TACC3Q9Y6A5 838 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 MYPNQ86TC9 1320 aa10.22□□□□□ -0.77
COL28A1-205ENST00000453441 CEP350Q5VT06 3117 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 F5H6K3 240 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 PDHXO00330 501 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 IGF2BP3O00425 579 aaKnown RBP eCLIP10.21□□□□□ -0.77
COL28A1-205ENST00000453441 VCAM1P19320 739 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 GCLCP48506 637 aaPredicted RBP10.21□□□□□ -0.77
COL28A1-205ENST00000453441 IRX3P78415 501 aaPredicted RBP10.21□□□□□ -0.77
COL28A1-205ENST00000453441 KLRC3Q07444 240 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 SHROOM1Q2M3G4 852 aaPredicted RBP10.21□□□□□ -0.77
COL28A1-205ENST00000453441 GPAT2Q6NUI2 795 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 STOX1Q6ZVD7 989 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 DHX32Q7L7V1 743 aaKnown RBP10.21□□□□□ -0.77
COL28A1-205ENST00000453441 DCAF4Q8WV16 495 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 IL17RAQ96F46 866 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 GMCL1Q96IK5 515 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 ZIC5Q96T25 663 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 PTPN18Q99952 460 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 KAT14Q9H8E8 782 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 INCENPQ9NQS7 918 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 RNF186Q9NXI6 227 aa10.21□□□□□ -0.77
COL28A1-205ENST00000453441 TNKSO95271 1327 aa10.21□□□□□ -0.78
COL28A1-205ENST00000453441 IFIT3O14879 490 aaKnown RBP10.2□□□□□ -0.78
COL28A1-205ENST00000453441 PRC1O43663 620 aa10.2□□□□□ -0.78
COL28A1-205ENST00000453441 PLA2G6O60733 806 aa10.2□□□□□ -0.78
COL28A1-205ENST00000453441 ZMYND10O75800 440 aa10.2□□□□□ -0.78
COL28A1-205ENST00000453441 FDX1P10109 184 aa10.2□□□□□ -0.78
COL28A1-205ENST00000453441 LIFRP42702 1097 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms