RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 LEO1Q8WVC0 666 aaPredicted RBP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 GPKOWQ92917 476 aaPredicted RBP eCLIP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 ZKSCAN4Q969J2 545 aaPredicted RBP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 RRP36Q96EU6 259 aaKnown RBP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 NUP88Q99567 741 aaPredicted RBP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 WDR18Q9BV38 432 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 FTOQ9C0B1 505 aaKnown RBP eCLIP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 VCPKMTQ9H867 229 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 BARHL2Q9NY43 387 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 ELP1O95163 1332 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 RBBP6Q7Z6E9 1792 aaKnown RBP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 WDR81Q562E7 1941 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 PNMA6FA0A0J9YX94 578 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 IQCA1LA6NCM1 817 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 FAM205CA6NFA0 338 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 FIBPO43427 364 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 PLA2G6O60733 806 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 XBP1P17861 261 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 PTPRAP18433 802 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 NCLP19338 710 aaKnown RBP6.91□□□□□ -1.3
SDC4P-201ENST00000453285 KRT2P35908 639 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 NLRP5P59047 1200 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 SAFBQ15424 915 aaKnown RBP eCLIP6.91□□□□□ -1.3
SDC4P-201ENST00000453285 SKOR2Q2VWA4 1001 aaPredicted RBP6.91□□□□□ -1.3
SDC4P-201ENST00000453285 NOM1Q5C9Z4 860 aaKnown RBP6.91□□□□□ -1.3
SDC4P-201ENST00000453285 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.91□□□□□ -1.3
SDC4P-201ENST00000453285 KRT26Q7Z3Y9 468 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 HOMER1Q86YM7 354 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 NOSTRINQ8IVI9 506 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 SULF1Q8IWU6 871 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 DAGLBQ8NCG7 672 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 PGBD1Q96JS3 809 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 ZNF396Q96N95 335 aaPredicted RBP6.91□□□□□ -1.3
SDC4P-201ENST00000453285 WRNIP1Q96S55 665 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 SCAND2PQ9GZW5 306 aaPredicted RBP6.91□□□□□ -1.3
SDC4P-201ENST00000453285 KIAA1683Q9H0B3 1180 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 ZMYND12Q9H0C1 365 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 GOPCQ9HD26 462 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 RTEL1Q9NZ71 1219 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 CFAP45Q9UL16 551 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 CLIC4Q9Y696 253 aa6.91□□□□□ -1.3
SDC4P-201ENST00000453285 KIAA1217Q5T5P2 1943 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 ESYT2A0FGR8 921 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 TMEM232C9JQI7 657 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 hCG_1984214I3L0E3 225 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 ZBTB5O15062 677 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 RAD21O60216 631 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 POTEIP0CG38 1075 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 POTEJP0CG39 1038 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 CALML3P27482 149 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 NASPP49321 788 aaPredicted RBP6.9□□□□□ -1.3
SDC4P-201ENST00000453285 MAP3K9P80192 1104 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 CEBPZQ03701 1054 aaKnown RBP6.9□□□□□ -1.3
SDC4P-201ENST00000453285 DGKZQ13574 1117 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 PTPAQ15257 358 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 MAP3K11Q16584 847 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 QRICH1Q2TAL8 776 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 KLHL40Q2TBA0 621 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 FAM83BQ5T0W9 1011 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 SYDE2Q5VT97 1194 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 ANO1Q5XXA6 986 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 GALNT17Q6IS24 598 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 HEATR3Q7Z4Q2 680 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 PNMA8AQ86V59 439 aaPredicted RBP6.9□□□□□ -1.3
SDC4P-201ENST00000453285 BLIDQ8IZY5 108 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 SPICE1Q8N0Z3 855 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 ZNF713Q8N859 430 aaPredicted RBP6.9□□□□□ -1.3
SDC4P-201ENST00000453285 LINC00301Q8NCQ3 95 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 COA7Q96BR5 231 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 CDCA5Q96FF9 252 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 SPATA32Q96LK8 384 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 SH2D4AQ9H788 454 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 EMILIN3Q9NT22 766 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 POLR3EQ9NVU0 708 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 PRR12Q9ULL5 1215 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 PCDHA6Q9UN73 950 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 PCDHA4Q9UN74 947 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 PCDHA8Q9Y5H6 950 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 SNCAIPQ9Y6H5 919 aa6.9□□□□□ -1.3
SDC4P-201ENST00000453285 LCTP09848 1927 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 SMCO2A6NFE2 343 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 WNT7AO00755 349 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 WDR46O15213 610 aaKnown RBP6.89□□□□□ -1.31
SDC4P-201ENST00000453285 EDIL3O43854 480 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 YEATS4O95619 227 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 NAPAP54920 295 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 BACE1P56817 501 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 SNAP25P60880 206 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 UBE2HP62256 183 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 SPP2Q13103 211 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 GNL2Q13823 731 aaKnown RBP6.89□□□□□ -1.31
SDC4P-201ENST00000453285 PRKG1Q13976 671 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 VGLL4Q14135 290 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 SLC39A14Q15043 492 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 SF3A1Q15459 793 aaKnown RBP6.89□□□□□ -1.31
SDC4P-201ENST00000453285 ZYXQ15942 572 aaKnown RBP6.89□□□□□ -1.31
SDC4P-201ENST00000453285 CDC37Q16543 378 aaPredicted RBP6.89□□□□□ -1.31
SDC4P-201ENST00000453285 CSPP1Q1MSJ5 1256 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 EAPPQ56P03 285 aaPredicted RBP6.89□□□□□ -1.31
SDC4P-201ENST00000453285 RILPL1Q5EBL4 403 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms