RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 DDX4Q9NQI0 724 aaKnown RBP22.97■■□□□ 1.27
PDCD2-204ENST00000453163 CDC25AP30304 524 aa22.97■■□□□ 1.27
PDCD2-204ENST00000453163 ARL6IP4Q66PJ3 421 aaKnown RBP22.97■■□□□ 1.27
PDCD2-204ENST00000453163 DPP8Q6V1X1 898 aaPredicted RBP22.97■■□□□ 1.27
PDCD2-204ENST00000453163 CCAR2Q8N163 923 aaKnown RBP22.97■■□□□ 1.27
PDCD2-204ENST00000453163 CD44P16070 742 aaKnown RBP22.96■■□□□ 1.27
PDCD2-204ENST00000453163 SMYD4Q8IYR2 804 aaPredicted RBP22.96■■□□□ 1.27
PDCD2-204ENST00000453163 IQUBQ8NA54 791 aa22.96■■□□□ 1.27
PDCD2-204ENST00000453163 SAMSN1Q9NSI8 373 aaKnown RBP22.96■■□□□ 1.27
PDCD2-204ENST00000453163 MMP10P09238 476 aa22.96■■□□□ 1.27
PDCD2-204ENST00000453163 SCNN1DP51172 638 aa22.96■■□□□ 1.27
PDCD2-204ENST00000453163 PDXDC2PQ6P474 469 aa22.96■■□□□ 1.27
PDCD2-204ENST00000453163 NAPAP54920 295 aa22.95■■□□□ 1.27
PDCD2-204ENST00000453163 GALNT17Q6IS24 598 aa22.95■■□□□ 1.27
PDCD2-204ENST00000453163 KLHL10Q6JEL2 608 aa22.95■■□□□ 1.27
PDCD2-204ENST00000453163 GSDMAQ96QA5 445 aa22.95■■□□□ 1.27
PDCD2-204ENST00000453163 BLZF1Q9H2G9 400 aa22.95■■□□□ 1.27
PDCD2-204ENST00000453163 SUGT1Q9Y2Z0 365 aa22.95■■□□□ 1.27
PDCD2-204ENST00000453163 USP17L5A8MUK1 530 aa22.95■■□□□ 1.26
PDCD2-204ENST00000453163 APBA3O96018 575 aa22.95■■□□□ 1.26
PDCD2-204ENST00000453163 CDK11BP21127 795 aaKnown RBP22.95■■□□□ 1.26
PDCD2-204ENST00000453163 ERCC5P28715 1186 aaPredicted RBP22.95■■□□□ 1.26
PDCD2-204ENST00000453163 MTRQ99707 1265 aa22.95■■□□□ 1.26
PDCD2-204ENST00000453163 TMEM60Q9H2L4 133 aa22.95■■□□□ 1.26
PDCD2-204ENST00000453163 LONP1P36776 959 aaKnown RBP22.95■■□□□ 1.26
PDCD2-204ENST00000453163 NOVP48745 357 aa22.95■■□□□ 1.26
PDCD2-204ENST00000453163 GABPAQ06546 454 aa22.95■■□□□ 1.26
PDCD2-204ENST00000453163 E4F1Q66K89 784 aaPredicted RBP22.95■■□□□ 1.26
PDCD2-204ENST00000453163 NYAP1Q6ZVC0 841 aa22.95■■□□□ 1.26
PDCD2-204ENST00000453163 CLEC10AQ8IUN9 316 aa22.95■■□□□ 1.26
PDCD2-204ENST00000453163 VAT1LQ9HCJ6 419 aa22.95■■□□□ 1.26
PDCD2-204ENST00000453163 GOLGA8FQ08AF8 430 aa22.94■■□□□ 1.26
PDCD2-204ENST00000453163 GOLGA8DPQ0D2H9 430 aa22.94■■□□□ 1.26
PDCD2-204ENST00000453163 MSL1Q68DK7 614 aa22.94■■□□□ 1.26
PDCD2-204ENST00000453163 ZMYND12Q9H0C1 365 aa22.94■■□□□ 1.26
PDCD2-204ENST00000453163 PLIN4Q96Q06 1357 aa22.94■■□□□ 1.26
PDCD2-204ENST00000453163 PLSCR1O15162 318 aa22.94■■□□□ 1.26
PDCD2-204ENST00000453163 AKR1B1P15121 316 aa22.94■■□□□ 1.26
PDCD2-204ENST00000453163 ALDH1B1P30837 517 aa22.94■■□□□ 1.26
PDCD2-204ENST00000453163 CUL4BQ13620 913 aa22.94■■□□□ 1.26
PDCD2-204ENST00000453163 GTPBP4Q9BZE4 634 aaKnown RBP22.94■■□□□ 1.26
PDCD2-204ENST00000453163 PDE6BP35913 854 aa22.93■■□□□ 1.26
PDCD2-204ENST00000453163 EIF6P56537 245 aaKnown RBP22.93■■□□□ 1.26
PDCD2-204ENST00000453163 STX17P56962 302 aa22.93■■□□□ 1.26
PDCD2-204ENST00000453163 CEP135Q66GS9 1140 aa22.93■■□□□ 1.26
PDCD2-204ENST00000453163 RRP36Q96EU6 259 aaKnown RBP22.93■■□□□ 1.26
PDCD2-204ENST00000453163 PIGSQ96S52 555 aa22.93■■□□□ 1.26
PDCD2-204ENST00000453163 UBA5Q9GZZ9 404 aa22.93■■□□□ 1.26
PDCD2-204ENST00000453163 KCND1Q9NSA2 647 aa22.93■■□□□ 1.26
PDCD2-204ENST00000453163 FRMPD2Q68DX3 1309 aaPredicted RBP22.93■■□□□ 1.26
PDCD2-204ENST00000453163 SYNRGQ9UMZ2 1314 aa22.93■■□□□ 1.26
PDCD2-204ENST00000453163 DHX8Q14562 1220 aaKnown RBP22.93■■□□□ 1.26
PDCD2-204ENST00000453163 PTPN14Q15678 1187 aa22.93■■□□□ 1.26
PDCD2-204ENST00000453163 LRRC47Q8N1G4 583 aaKnown RBP22.93■■□□□ 1.26
PDCD2-204ENST00000453163 ZNF592Q92610 1267 aa22.93■■□□□ 1.26
PDCD2-204ENST00000453163 USP40Q9NVE5 1235 aa22.93■■□□□ 1.26
PDCD2-204ENST00000453163 MTMR4Q9NYA4 1195 aa22.93■■□□□ 1.26
PDCD2-204ENST00000453163 PARP3Q9Y6F1 533 aa22.93■■□□□ 1.26
PDCD2-204ENST00000453163 PDHBP11177 359 aa22.92■■□□□ 1.26
PDCD2-204ENST00000453163 KARSQ15046 597 aaKnown RBP22.92■■□□□ 1.26
PDCD2-204ENST00000453163 SEC63Q9UGP8 760 aaKnown RBP22.92■■□□□ 1.26
PDCD2-204ENST00000453163 PP2D1A8MPX8 630 aa22.92■■□□□ 1.26
PDCD2-204ENST00000453163 HMGB2P26583 209 aaKnown RBP22.92■■□□□ 1.26
PDCD2-204ENST00000453163 DTHD1Q6ZMT9 781 aa22.92■■□□□ 1.26
PDCD2-204ENST00000453163 MASTLQ96GX5 879 aa22.92■■□□□ 1.26
PDCD2-204ENST00000453163 PYM1Q9BRP8 204 aaKnown RBP22.92■■□□□ 1.26
PDCD2-204ENST00000453163 SMCO2A6NFE2 343 aa22.91■■□□□ 1.26
PDCD2-204ENST00000453163 PPP1R3GB7ZBB8 358 aa22.91■■□□□ 1.26
PDCD2-204ENST00000453163 TXLNAP40222 546 aa22.91■■□□□ 1.26
PDCD2-204ENST00000453163 SYCP1Q15431 976 aa22.91■■□□□ 1.26
PDCD2-204ENST00000453163 CCDC12Q8WUD4 166 aaPredicted RBP22.91■■□□□ 1.26
PDCD2-204ENST00000453163 ZHX1Q9UKY1 873 aaPredicted RBP22.91■■□□□ 1.26
PDCD2-204ENST00000453163 G3V3G9 751 aa22.9■■□□□ 1.26
PDCD2-204ENST00000453163 NRDCO43847 1150 aa22.9■■□□□ 1.26
PDCD2-204ENST00000453163 DCAF8Q5TAQ9 597 aa22.9■■□□□ 1.26
PDCD2-204ENST00000453163 ZNF622Q969S3 477 aaKnown RBP eCLIP22.9■■□□□ 1.26
PDCD2-204ENST00000453163 DBNDD1Q9H9R9 158 aa22.9■■□□□ 1.26
PDCD2-204ENST00000453163 KCNQ5Q9NR82 932 aa22.9■■□□□ 1.26
PDCD2-204ENST00000453163 GTPBP6O43824 516 aaPredicted RBP22.9■■□□□ 1.26
PDCD2-204ENST00000453163 CT47A1Q5JQC4 288 aaPredicted RBP22.9■■□□□ 1.26
PDCD2-204ENST00000453163 SPATA1Q5VX52 437 aa22.9■■□□□ 1.26
PDCD2-204ENST00000453163 CDC42EP5Q6NZY7 148 aa22.9■■□□□ 1.26
PDCD2-204ENST00000453163 DISC1Q9NRI5 854 aa22.9■■□□□ 1.26
PDCD2-204ENST00000453163 SERPINB13Q9UIV8 391 aa22.9■■□□□ 1.26
PDCD2-204ENST00000453163 STAT6P42226 847 aa22.89■■□□□ 1.26
PDCD2-204ENST00000453163 FAM177A1Q8N128 213 aaPredicted RBP22.89■■□□□ 1.26
PDCD2-204ENST00000453163 PPP1R13BQ96KQ4 1090 aa22.89■■□□□ 1.26
PDCD2-204ENST00000453163 C6orf50Q9HD87 102 aa22.89■■□□□ 1.26
PDCD2-204ENST00000453163 PAXBP1Q9Y5B6 917 aa22.89■■□□□ 1.26
PDCD2-204ENST00000453163 IGKV6D-41A0A0C4DH26 115 aa22.89■■□□□ 1.25
PDCD2-204ENST00000453163 SMARCA1P28370 1054 aa22.89■■□□□ 1.25
PDCD2-204ENST00000453163 APOBEC3HQ6NTF7 200 aaKnown RBP22.89■■□□□ 1.25
PDCD2-204ENST00000453163 TMX4Q9H1E5 349 aaPredicted RBP22.89■■□□□ 1.25
PDCD2-204ENST00000453163 CTNND2Q9UQB3 1225 aa22.89■■□□□ 1.25
PDCD2-204ENST00000453163 SLURP2P0DP57 97 aa22.88■■□□□ 1.25
PDCD2-204ENST00000453163 KCNJ6P48051 423 aa22.88■■□□□ 1.25
PDCD2-204ENST00000453163 NFIAQ12857 509 aa22.88■■□□□ 1.25
PDCD2-204ENST00000453163 LETM2Q2VYF4 491 aa22.88■■□□□ 1.25
PDCD2-204ENST00000453163 TEKT1Q969V4 418 aa22.88■■□□□ 1.25
PDCD2-204ENST00000453163 RIOX1Q9H6W3 641 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms