RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 PQBP1O60828 265 aaKnown RBP13.96□□□□□ -0.17
GARNL3-210ENST00000453030 PRDM1O75626 825 aa13.96□□□□□ -0.17
GARNL3-210ENST00000453030 AKR1A1P14550 325 aa13.96□□□□□ -0.17
GARNL3-210ENST00000453030 TLE2Q04725 743 aa13.96□□□□□ -0.17
GARNL3-210ENST00000453030 KLRC3Q07444 240 aa13.96□□□□□ -0.17
GARNL3-210ENST00000453030 ZNF697Q5TEC3 545 aa13.96□□□□□ -0.17
GARNL3-210ENST00000453030 RNF180Q86T96 592 aa13.96□□□□□ -0.17
GARNL3-210ENST00000453030 LRRC47Q8N1G4 583 aaKnown RBP13.96□□□□□ -0.17
GARNL3-210ENST00000453030 TRIM43Q96BQ3 446 aaPredicted RBP13.96□□□□□ -0.17
GARNL3-210ENST00000453030 NRBP1Q9UHY1 535 aa13.96□□□□□ -0.17
GARNL3-210ENST00000453030 PHF24Q9UPV7 400 aa13.96□□□□□ -0.17
GARNL3-210ENST00000453030 CNPY2Q9Y2B0 182 aa13.96□□□□□ -0.17
GARNL3-210ENST00000453030 DIS3Q9Y2L1 958 aaKnown RBP13.96□□□□□ -0.17
GARNL3-210ENST00000453030 MYO9BQ13459 2157 aa13.95□□□□□ -0.18
GARNL3-210ENST00000453030 A0A1W2PQ45 241 aaPredicted RBP13.95□□□□□ -0.18
GARNL3-210ENST00000453030 A0A1W2PQY0 241 aa13.95□□□□□ -0.18
GARNL3-210ENST00000453030 RNF113AO15541 343 aaKnown RBP13.95□□□□□ -0.18
GARNL3-210ENST00000453030 APPP05067 770 aa13.95□□□□□ -0.18
GARNL3-210ENST00000453030 ZNF865P0CJ78 1059 aaPredicted RBP13.95□□□□□ -0.18
GARNL3-210ENST00000453030 GIMAP6Q6P9H5 292 aa13.95□□□□□ -0.18
GARNL3-210ENST00000453030 CPXCR1Q8N123 301 aa13.95□□□□□ -0.18
GARNL3-210ENST00000453030 KIFC2Q96AC6 838 aa13.95□□□□□ -0.18
GARNL3-210ENST00000453030 NYAP2Q9P242 653 aa13.95□□□□□ -0.18
GARNL3-210ENST00000453030 CLIP2Q9UDT6 1046 aa13.95□□□□□ -0.18
GARNL3-210ENST00000453030 ZHX1Q9UKY1 873 aaPredicted RBP13.95□□□□□ -0.18
GARNL3-210ENST00000453030 ISY1Q9ULR0 285 aaKnown RBP13.95□□□□□ -0.18
GARNL3-210ENST00000453030 RIPK3Q9Y572 518 aa13.95□□□□□ -0.18
GARNL3-210ENST00000453030 CTDP1Q9Y5B0 961 aaPredicted RBP13.95□□□□□ -0.18
GARNL3-210ENST00000453030 SYNRGQ9UMZ2 1314 aa13.94□□□□□ -0.18
GARNL3-210ENST00000453030 LCTP09848 1927 aa13.94□□□□□ -0.18
GARNL3-210ENST00000453030 CLTBP09497 229 aa13.94□□□□□ -0.18
GARNL3-210ENST00000453030 C1orf53Q5VUE5 145 aa13.94□□□□□ -0.18
GARNL3-210ENST00000453030 FAM109BQ6ICB4 259 aaPredicted RBP13.94□□□□□ -0.18
GARNL3-210ENST00000453030 DDX11Q96FC9 970 aa13.94□□□□□ -0.18
GARNL3-210ENST00000453030 CEP95Q96GE4 821 aa13.94□□□□□ -0.18
GARNL3-210ENST00000453030 SYNGAP1Q96PV0 1343 aa13.93□□□□□ -0.18
GARNL3-210ENST00000453030 IGKV6D-41A0A0C4DH26 115 aa13.93□□□□□ -0.18
GARNL3-210ENST00000453030 ADAMTS4O75173 837 aa13.93□□□□□ -0.18
GARNL3-210ENST00000453030 ZFYP08048 801 aaPredicted RBP13.93□□□□□ -0.18
GARNL3-210ENST00000453030 GNAT2P19087 354 aa13.93□□□□□ -0.18
GARNL3-210ENST00000453030 ITGB8P26012 769 aa13.93□□□□□ -0.18
GARNL3-210ENST00000453030 ZNF444Q8N0Y2 327 aaPredicted RBP13.93□□□□□ -0.18
GARNL3-210ENST00000453030 PRPF38AQ8NAV1 312 aaKnown RBP13.93□□□□□ -0.18
GARNL3-210ENST00000453030 CHMP4CQ96CF2 233 aa13.93□□□□□ -0.18
GARNL3-210ENST00000453030 DCTPP1Q9H773 170 aa13.93□□□□□ -0.18
GARNL3-210ENST00000453030 RAVER2Q9HCJ3 691 aaKnown RBP13.93□□□□□ -0.18
GARNL3-210ENST00000453030 SPTBN5Q9NRC6 3674 aaKnown RBP13.92□□□□□ -0.18
GARNL3-210ENST00000453030 MYADML2A6NDP7 307 aa13.92□□□□□ -0.18
GARNL3-210ENST00000453030 ZBED4O75132 1171 aa13.92□□□□□ -0.18
GARNL3-210ENST00000453030 RAG1P15918 1043 aa13.92□□□□□ -0.18
GARNL3-210ENST00000453030 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.92□□□□□ -0.18
GARNL3-210ENST00000453030 RNPC3Q96LT9 517 aaKnown RBP13.92□□□□□ -0.18
GARNL3-210ENST00000453030 SEC62Q99442 399 aaKnown RBP13.92□□□□□ -0.18
GARNL3-210ENST00000453030 ZNF287Q9HBT7 754 aa13.92□□□□□ -0.18
GARNL3-210ENST00000453030 STARD7Q9NQZ5 370 aa13.92□□□□□ -0.18
GARNL3-210ENST00000453030 HOMER2Q9NSB8 354 aa13.92□□□□□ -0.18
GARNL3-210ENST00000453030 TACC3Q9Y6A5 838 aa13.92□□□□□ -0.18
GARNL3-210ENST00000453030 GBF1Q92538 1859 aa13.92□□□□□ -0.18
GARNL3-210ENST00000453030 PLIN4Q96Q06 1357 aa13.92□□□□□ -0.18
GARNL3-210ENST00000453030 DNAJC25-GNG10A0A024R161 153 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 SNAI1O95863 264 aaPredicted RBP13.91□□□□□ -0.18
GARNL3-210ENST00000453030 TTLL1O95922 423 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 TSPY3P0CV98 308 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 TSPY8P0CW00 308 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 ACLYP53396 1101 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 EPHB4P54760 987 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 IRX5P78411 483 aaPredicted RBP13.91□□□□□ -0.18
GARNL3-210ENST00000453030 IFNL3Q8IZI9 196 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 ANKRD35Q8N283 1001 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 MSL3Q8N5Y2 521 aaKnown RBP13.91□□□□□ -0.18
GARNL3-210ENST00000453030 OTUD7AQ8TE49 926 aaPredicted RBP13.91□□□□□ -0.18
GARNL3-210ENST00000453030 FSD1Q9BTV5 496 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 SLC38A10Q9HBR0 1119 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 TMEM39AQ9NV64 488 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.91□□□□□ -0.18
GARNL3-210ENST00000453030 MTMR4Q9NYA4 1195 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 FEM1BQ9UK73 627 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 FAM184BQ9ULE4 1060 aa13.91□□□□□ -0.18
GARNL3-210ENST00000453030 PATL2C9JE40 543 aaKnown RBP13.9□□□□□ -0.18
GARNL3-210ENST00000453030 ATP2A1O14983 1001 aa13.9□□□□□ -0.18
GARNL3-210ENST00000453030 KIAA0355O15063 1070 aa13.9□□□□□ -0.18
GARNL3-210ENST00000453030 ADCY6O43306 1168 aa13.9□□□□□ -0.18
GARNL3-210ENST00000453030 C6orf222P0C671 652 aaPredicted RBP13.9□□□□□ -0.18
GARNL3-210ENST00000453030 SMAD3P84022 425 aaKnown RBP13.9□□□□□ -0.18
GARNL3-210ENST00000453030 IKQ13123 557 aaPredicted RBP13.9□□□□□ -0.18
GARNL3-210ENST00000453030 ACVR2BQ13705 512 aa13.9□□□□□ -0.18
GARNL3-210ENST00000453030 KCNA10Q16322 511 aa13.9□□□□□ -0.18
GARNL3-210ENST00000453030 LRRFIP1Q32MZ4 808 aaKnown RBP13.9□□□□□ -0.18
GARNL3-210ENST00000453030 SLFN13Q68D06 897 aa13.9□□□□□ -0.18
GARNL3-210ENST00000453030 MAMDC4Q6UXC1 1216 aa13.9□□□□□ -0.18
GARNL3-210ENST00000453030 GMCL1P1Q8NEA9 526 aa13.9□□□□□ -0.18
GARNL3-210ENST00000453030 FGD4Q96M96 766 aa13.9□□□□□ -0.18
GARNL3-210ENST00000453030 CDX2Q99626 313 aaPredicted RBP13.9□□□□□ -0.18
GARNL3-210ENST00000453030 NACAP1Q9BZK3 213 aa13.9□□□□□ -0.18
GARNL3-210ENST00000453030 NAPBQ9H115 298 aa13.9□□□□□ -0.18
GARNL3-210ENST00000453030 TTYH1Q9H313 450 aaPredicted RBP13.9□□□□□ -0.18
GARNL3-210ENST00000453030 TTC41PQ6P2S7 1318 aa13.9□□□□□ -0.19
GARNL3-210ENST00000453030 MOXD2PA6NHM9 499 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 ERC2O15083 957 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 DUSP11O75319 330 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms