RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 UQCRHLA0A096LP55 91 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 HLA-DOAP06340 250 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 UQCRHP07919 91 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 PDHBP11177 359 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 SLC16A2P36021 539 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 TMEM60Q9H2L4 133 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 SUGT1Q9Y2Z0 365 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 NFE2L3Q9Y4A8 694 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 C21orf2O43822 256 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 GABPAQ06546 454 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 KARSQ15046 597 aaKnown RBP13.38□□□□□ -0.27
VTA1-203ENST00000452973 LZTS2Q9BRK4 669 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 SPTLC3Q9NUV7 552 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 TRMT1Q9NXH9 659 aaKnown RBP13.38□□□□□ -0.27
VTA1-203ENST00000452973 CCNT1O60563 726 aaKnown RBP13.38□□□□□ -0.27
VTA1-203ENST00000452973 SLC15A2Q16348 729 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 CCDC96Q2M329 555 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 KCTD1Q719H9 257 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 SPZ1Q9BXG8 430 aa13.38□□□□□ -0.27
VTA1-203ENST00000452973 SARSP49591 514 aaKnown RBP13.37□□□□□ -0.27
VTA1-203ENST00000452973 MORC3Q14149 939 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 TPD52L1Q16890 204 aaPredicted RBP13.37□□□□□ -0.27
VTA1-203ENST00000452973 TTBK2Q6IQ55 1244 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 DTHD1Q6ZMT9 781 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 TMEM260Q9NX78 707 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 UTRNP46939 3433 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 SHMT1P34896 483 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 NT5C2P49902 561 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 GOLGA8FQ08AF8 430 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 GOLGA8DPQ0D2H9 430 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 HHIPL2Q6UWX4 724 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 CREBRFQ8IUR6 639 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 IQUBQ8NA54 791 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 C6orf50Q9HD87 102 aa13.37□□□□□ -0.27
VTA1-203ENST00000452973 SAMSN1Q9NSI8 373 aaKnown RBP13.37□□□□□ -0.27
VTA1-203ENST00000452973 DDTLA6NHG4 134 aaPredicted RBP13.36□□□□□ -0.27
VTA1-203ENST00000452973 TMEM232C9JQI7 657 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 TTLL1O95922 423 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 MLKLQ8NB16 471 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 TRIM34Q9BYJ4 488 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 STK32BQ9NY57 414 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 MAPK8IP1Q9UQF2 711 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 ZNF592Q92610 1267 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 TDRD3Q9H7E2 651 aaKnown RBP13.36□□□□□ -0.27
VTA1-203ENST00000452973 LRRC37AA6NMS7 1700 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 LTBP1Q14766 1721 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 ADAMTSL1Q8N6G6 1762 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 COL11A2P13942 1736 aaPredicted RBP13.36□□□□□ -0.27
VTA1-203ENST00000452973 M0R2N6 131 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 TXLNAP40222 546 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 STAT6P42226 847 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 CUL4BQ13620 913 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 DACT2Q5SW24 774 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 NT5DC1Q5TFE4 455 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 C4orf32Q8N8J7 132 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 CCDC12Q8WUD4 166 aaPredicted RBP13.36□□□□□ -0.27
VTA1-203ENST00000452973 ZMYND12Q9H0C1 365 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 DACH1Q9UI36 760 aa13.36□□□□□ -0.27
VTA1-203ENST00000452973 USP27XA6NNY8 438 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 PPIP5K2O43314 1243 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 CD44P16070 742 aaKnown RBP13.35□□□□□ -0.27
VTA1-203ENST00000452973 GNA11P29992 359 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 STRIP1Q5VSL9 837 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 POTEAQ6S8J7 498 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 CNKSR1Q969H4 720 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 SFPQP23246 707 aaKnown RBP eCLIP13.35□□□□□ -0.27
VTA1-203ENST00000452973 UBA7P41226 1012 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 RBM10P98175 930 aaKnown RBP13.35□□□□□ -0.27
VTA1-203ENST00000452973 NONOQ15233 471 aaKnown RBP eCLIP13.35□□□□□ -0.27
VTA1-203ENST00000452973 STYK1Q6J9G0 422 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 ARMCX5Q6P1M9 558 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 TBCKQ8TEA7 893 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 TSC1Q92574 1164 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 UIMC1Q96RL1 719 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 MED15Q96RN5 788 aa13.35□□□□□ -0.27
VTA1-203ENST00000452973 GDF11O95390 407 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 DPYDQ12882 1025 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 DHX8Q14562 1220 aaKnown RBP13.34□□□□□ -0.27
VTA1-203ENST00000452973 ELOA2Q8IYF1 753 aaPredicted RBP13.34□□□□□ -0.27
VTA1-203ENST00000452973 REXO1Q8N1G1 1221 aaKnown RBP13.34□□□□□ -0.27
VTA1-203ENST00000452973 ZDHHC15Q96MV8 337 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 SWAP70Q9UH65 585 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 SLX4Q8IY92 1834 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 TPM2P07951 284 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 CCZ1BP86790 482 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 CCZ1P86791 482 aaPredicted RBP13.34□□□□□ -0.27
VTA1-203ENST00000452973 ARL6IP4Q66PJ3 421 aaKnown RBP13.34□□□□□ -0.27
VTA1-203ENST00000452973 ADGRF4Q8IZF3 695 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 MTRQ99707 1265 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 DNAJC18Q9H819 358 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 LONP1P36776 959 aaKnown RBP13.34□□□□□ -0.27
VTA1-203ENST00000452973 GSDMDP57764 484 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 E2F4Q16254 413 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 GALNT17Q6IS24 598 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 DEFB132Q7Z7B7 95 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 TRIML1Q8N9V2 468 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 SPATA20Q8TB22 786 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 FAM198AQ9UFP1 575 aa13.34□□□□□ -0.27
VTA1-203ENST00000452973 CBFA2T2O43439 604 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms