RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 NDOR1Q9UHB4 597 aa8.34□□□□□ -1.07
CSTF1-204ENST00000452950 ADAM30Q9UKF2 790 aa8.34□□□□□ -1.07
CSTF1-204ENST00000452950 LTBP4Q8N2S1 1624 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 GNB5O14775 395 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 PRODHO43272 600 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 OPA1O60313 960 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 RFPL1O75677 317 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 WDHD1O75717 1129 aaPredicted RBP8.33□□□□□ -1.08
CSTF1-204ENST00000452950 PROCP04070 461 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 ASLP04424 464 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 DGKGP49619 791 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 PMS1P54277 932 aaKnown RBP8.33□□□□□ -1.08
CSTF1-204ENST00000452950 IRX6P78412 446 aaPredicted RBP8.33□□□□□ -1.08
CSTF1-204ENST00000452950 HNRNPUQ00839 825 aaKnown RBP eCLIP8.33□□□□□ -1.08
CSTF1-204ENST00000452950 CNTD1Q8N815 330 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 LRRN4CLQ8ND94 238 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 USP7Q93009 1102 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 KRT82Q9NSB4 513 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 FAM86C1Q9NVL1 165 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 PNMA2Q9UL42 364 aa8.33□□□□□ -1.08
CSTF1-204ENST00000452950 TNPO3Q9Y5L0 923 aaKnown RBP8.33□□□□□ -1.08
CSTF1-204ENST00000452950 IQSEC2Q5JU85 1478 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 CHURC1-FNTBB4DL54 471 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 PIK3R2O00459 728 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 KPNA6O60684 536 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 EFCAB14O75071 495 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 PGRP06401 933 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 ITGAVP06756 1048 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 POLR2BP30876 1174 aaKnown RBP8.32□□□□□ -1.08
CSTF1-204ENST00000452950 SEPT7Q16181 437 aaKnown RBP8.32□□□□□ -1.08
CSTF1-204ENST00000452950 SYDE2Q5VT97 1194 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 HEATR6Q6AI08 1181 aaKnown RBP8.32□□□□□ -1.08
CSTF1-204ENST00000452950 FAM35AQ86V20 835 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 ZNF227Q86WZ6 799 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 SLC7A14Q8TBB6 771 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 JPH3Q8WXH2 748 aaPredicted RBP8.32□□□□□ -1.08
CSTF1-204ENST00000452950 TRIM8Q9BZR9 551 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 SH2B1Q9NRF2 756 aaPredicted RBP8.32□□□□□ -1.08
CSTF1-204ENST00000452950 SUSD2Q9UGT4 822 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 CFAP43Q8NDM7 1665 aa8.32□□□□□ -1.08
CSTF1-204ENST00000452950 SRCAPQ6ZRS2 3230 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 PTPRGP23470 1445 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 ERICH3Q5RHP9 1530 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 SOX1O00570 391 aaPredicted RBP8.31□□□□□ -1.08
CSTF1-204ENST00000452950 GABRDO14764 452 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 PRPF3O43395 683 aaKnown RBP8.31□□□□□ -1.08
CSTF1-204ENST00000452950 EIF4EBP3O60516 100 aaPredicted RBP8.31□□□□□ -1.08
CSTF1-204ENST00000452950 ABLIM3O94929 683 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 TP53P04637 393 aaPredicted RBP8.31□□□□□ -1.08
CSTF1-204ENST00000452950 EPHX1P07099 455 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 CPB1P15086 417 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 ZSCAN20P17040 1043 aaPredicted RBP8.31□□□□□ -1.08
CSTF1-204ENST00000452950 FLT3P36888 993 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 GSTM4Q03013 218 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 ZNF460Q14592 562 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 C10orf62Q5T681 223 aaPredicted RBP8.31□□□□□ -1.08
CSTF1-204ENST00000452950 CYFIP1Q7L576 1253 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 SYT9Q86SS6 491 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 OSBP2Q969R2 916 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 SCYL1Q96KG9 808 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 SLC6A18Q96N87 628 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 HAUS7Q99871 368 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 CORO1BQ9BR76 489 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 SOX17Q9H6I2 414 aaPredicted RBP8.31□□□□□ -1.08
CSTF1-204ENST00000452950 IFT22Q9H7X7 185 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 SLC52A2Q9HAB3 445 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 LUC7LQ9NQ29 371 aaKnown RBP8.31□□□□□ -1.08
CSTF1-204ENST00000452950 TRIM33Q9UPN9 1127 aa8.31□□□□□ -1.08
CSTF1-204ENST00000452950 ZCCHC11Q5TAX3 1644 aaKnown RBP8.31□□□□□ -1.08
CSTF1-204ENST00000452950 PREX1Q8TCU6 1659 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 YEATS2Q9ULM3 1422 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 MAGI3Q5TCQ9 1506 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 PRAMEF27A3QJZ7 478 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 CYP11A1P05108 521 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 GRK4P32298 578 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 IGFALSP35858 605 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 PDE6BP35913 854 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 GABREP78334 506 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 PURAQ00577 322 aaKnown RBP8.3□□□□□ -1.08
CSTF1-204ENST00000452950 SETDB1Q15047 1291 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 TDRD10Q5VZ19 366 aaKnown RBP8.3□□□□□ -1.08
CSTF1-204ENST00000452950 CXorf57Q6NSI4 855 aaKnown RBP8.3□□□□□ -1.08
CSTF1-204ENST00000452950 PPFIBP1Q86W92 1011 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 GSTCDQ8NEC7 633 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 PI4K2BQ8TCG2 481 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 COG1Q8WTW3 980 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 RHOBTB2Q9BYZ6 727 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 MTFR1LQ9H019 292 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 FBRSQ9HAH7 460 aa8.3□□□□□ -1.08
CSTF1-204ENST00000452950 SUCOQ9UBS9 1254 aaKnown RBP8.3□□□□□ -1.08
CSTF1-204ENST00000452950 APOBEC2Q9Y235 224 aaKnown RBP8.3□□□□□ -1.08
CSTF1-204ENST00000452950 H3BRJ5 948 aa8.29□□□□□ -1.08
CSTF1-204ENST00000452950 ZEB2O60315 1214 aa8.29□□□□□ -1.08
CSTF1-204ENST00000452950 FBXO21O94952 628 aa8.29□□□□□ -1.08
CSTF1-204ENST00000452950 IFIT2P09913 472 aaKnown RBP8.29□□□□□ -1.08
CSTF1-204ENST00000452950 C6orf222P0C671 652 aaPredicted RBP8.29□□□□□ -1.08
CSTF1-204ENST00000452950 JMJD7P0C870 316 aa8.29□□□□□ -1.08
CSTF1-204ENST00000452950 U2AF1L5P0DN76 240 aaPredicted RBP8.29□□□□□ -1.08
CSTF1-204ENST00000452950 EPHA1P21709 976 aa8.29□□□□□ -1.08
CSTF1-204ENST00000452950 GRIA2P42262 883 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms