RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TXNRD2Q9NNW7 524 aa15.2■□□□□ 0.02
VPS33A-202ENST00000451053 NAP1L2Q9ULW6 460 aaPredicted RBP15.2■□□□□ 0.02
VPS33A-202ENST00000451053 MYPNQ86TC9 1320 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 GOLGA8BA8MQT2 603 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 ZBTB43O43298 467 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 PLA2G6O60733 806 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 CNMDO75829 334 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 HSPA1AP0DMV8 641 aaKnown RBP15.19■□□□□ 0.02
VPS33A-202ENST00000451053 HSPA1BP0DMV9 641 aaKnown RBP15.19■□□□□ 0.02
VPS33A-202ENST00000451053 CALM1P0DP23 149 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 CALM2P0DP24 149 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 CALM3P0DP25 149 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 BCRP11274 1271 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 SLC35G1Q2M3R5 365 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 SYDE2Q5VT97 1194 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 C17orf99Q6UX52 265 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 LBX2Q6XYB7 198 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 SYNE3Q6ZMZ3 975 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 NOL8Q76FK4 1167 aaKnown RBP15.19■□□□□ 0.02
VPS33A-202ENST00000451053 ANKRD13CQ8N6S4 541 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 PRPF38AQ8NAV1 312 aaKnown RBP15.19■□□□□ 0.02
VPS33A-202ENST00000451053 CHURC1Q8WUH1 139 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 MAP3K14Q99558 947 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 PAGR1Q9BTK6 254 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 UBA5Q9GZZ9 404 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 HOXC10Q9NYD6 342 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 BTBD7Q9P203 1132 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 RBPJLQ9UBG7 517 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 PRR12Q9ULL5 1215 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 ADAMTS5Q9UNA0 930 aa15.19■□□□□ 0.02
VPS33A-202ENST00000451053 GOLGA8AA7E2F4 631 aa15.18■□□□□ 0.02
VPS33A-202ENST00000451053 KLRF2D3W0D1 207 aa15.18■□□□□ 0.02
VPS33A-202ENST00000451053 VWA5AO00534 786 aa15.18■□□□□ 0.02
VPS33A-202ENST00000451053 GCLCP48506 637 aaPredicted RBP15.18■□□□□ 0.02
VPS33A-202ENST00000451053 MCM2P49736 904 aa15.18■□□□□ 0.02
VPS33A-202ENST00000451053 EVCP57679 992 aa15.18■□□□□ 0.02
VPS33A-202ENST00000451053 SNAP25P60880 206 aa15.18■□□□□ 0.02
VPS33A-202ENST00000451053 FANCBQ8NB91 859 aa15.18■□□□□ 0.02
VPS33A-202ENST00000451053 REPS2Q8NFH8 660 aa15.18■□□□□ 0.02
VPS33A-202ENST00000451053 CTCFLQ8NI51 663 aaPredicted RBP15.18■□□□□ 0.02
VPS33A-202ENST00000451053 GTF3C2Q8WUA4 911 aaPredicted RBP15.18■□□□□ 0.02
VPS33A-202ENST00000451053 HPS5Q9UPZ3 1129 aa15.18■□□□□ 0.02
VPS33A-202ENST00000451053 FOXN1O15353 648 aa15.17■□□□□ 0.02
VPS33A-202ENST00000451053 PLEKHA8P1O95397 391 aa15.17■□□□□ 0.02
VPS33A-202ENST00000451053 PDIA3P30101 505 aaKnown RBP15.17■□□□□ 0.02
VPS33A-202ENST00000451053 KIF5BP33176 963 aa15.17■□□□□ 0.02
VPS33A-202ENST00000451053 RCAN1P53805 252 aa15.17■□□□□ 0.02
VPS33A-202ENST00000451053 ANKRD1Q15327 319 aa15.17■□□□□ 0.02
VPS33A-202ENST00000451053 NBPF11Q86T75 865 aa15.17■□□□□ 0.02
VPS33A-202ENST00000451053 HSCBQ8IWL3 235 aa15.17■□□□□ 0.02
VPS33A-202ENST00000451053 SNX21Q969T3 373 aa15.17■□□□□ 0.02
VPS33A-202ENST00000451053 FAM217BQ9NTX9 383 aaPredicted RBP15.17■□□□□ 0.02
VPS33A-202ENST00000451053 MORF4L1Q9UBU8 362 aa15.17■□□□□ 0.02
VPS33A-202ENST00000451053 TPCN1Q9ULQ1 816 aa15.17■□□□□ 0.02
VPS33A-202ENST00000451053 RABGAP1Q9Y3P9 1069 aa15.17■□□□□ 0.02
VPS33A-202ENST00000451053 COL11A1P12107 1806 aaPredicted RBP15.17■□□□□ 0.02
VPS33A-202ENST00000451053 NID2Q14112 1375 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 GPR25O00155 361 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 CDC27P30260 824 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 METAP2P50579 478 aaKnown RBP eCLIP15.16■□□□□ 0.02
VPS33A-202ENST00000451053 ERVK-9P63128 1117 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 ERVK-24P63145 666 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 STK3Q13188 491 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 TMEM132BQ14DG7 1078 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 RTN1Q16799 776 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 FAM110CQ1W6H9 321 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 Q3C1V9 767 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 ADGRF4Q8IZF3 695 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 CMTR1Q8N1G2 835 aaKnown RBP15.16■□□□□ 0.02
VPS33A-202ENST00000451053 MB21D1Q8N884 522 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 SLC38A10Q9HBR0 1119 aa15.16■□□□□ 0.02
VPS33A-202ENST00000451053 CYTH3O43739 400 aa15.15■□□□□ 0.02
VPS33A-202ENST00000451053 DHX16O60231 1041 aaKnown RBP15.15■□□□□ 0.02
VPS33A-202ENST00000451053 ZBED4O75132 1171 aa15.15■□□□□ 0.02
VPS33A-202ENST00000451053 LARGE1O95461 756 aa15.15■□□□□ 0.02
VPS33A-202ENST00000451053 HSPA8P11142 646 aaKnown RBP15.15■□□□□ 0.02
VPS33A-202ENST00000451053 CCT2P78371 535 aaKnown RBP15.15■□□□□ 0.02
VPS33A-202ENST00000451053 PLS1Q14651 629 aa15.15■□□□□ 0.02
VPS33A-202ENST00000451053 CCDC174Q6PII3 467 aa15.15■□□□□ 0.02
VPS33A-202ENST00000451053 TMTC3Q6ZXV5 915 aa15.15■□□□□ 0.02
VPS33A-202ENST00000451053 SRBD1Q8N5C6 995 aaKnown RBP15.15■□□□□ 0.02
VPS33A-202ENST00000451053 GPRC5AQ8NFJ5 357 aa15.15■□□□□ 0.02
VPS33A-202ENST00000451053 ZNF274Q96GC6 653 aaPredicted RBP15.15■□□□□ 0.02
VPS33A-202ENST00000451053 RANBP17Q9H2T7 1088 aaKnown RBP15.15■□□□□ 0.02
VPS33A-202ENST00000451053 JMJD4Q9H9V9 463 aa15.15■□□□□ 0.02
VPS33A-202ENST00000451053 NCOA5Q9HCD5 579 aaKnown RBP15.15■□□□□ 0.02
VPS33A-202ENST00000451053 RAVER2Q9HCJ3 691 aaKnown RBP15.15■□□□□ 0.02
VPS33A-202ENST00000451053 VAT1LQ9HCJ6 419 aa15.15■□□□□ 0.02
VPS33A-202ENST00000451053 DAXXQ9UER7 740 aaPredicted RBP15.15■□□□□ 0.02
VPS33A-202ENST00000451053 ZNF214Q9UL59 606 aaPredicted RBP15.15■□□□□ 0.02
VPS33A-202ENST00000451053 ZNF536O15090 1300 aa15.15■□□□□ 0.02
VPS33A-202ENST00000451053 ECM2O94769 699 aaPredicted RBP15.14■□□□□ 0.01
VPS33A-202ENST00000451053 CD2BP2O95400 341 aaKnown RBP15.14■□□□□ 0.01
VPS33A-202ENST00000451053 TAL1P17542 331 aaPredicted RBP15.14■□□□□ 0.01
VPS33A-202ENST00000451053 ADD1P35611 737 aaKnown RBP15.14■□□□□ 0.01
VPS33A-202ENST00000451053 GNAQP50148 359 aa15.14■□□□□ 0.01
VPS33A-202ENST00000451053 SP3Q02447 781 aa15.14■□□□□ 0.01
VPS33A-202ENST00000451053 NOM1Q5C9Z4 860 aaKnown RBP15.14■□□□□ 0.01
VPS33A-202ENST00000451053 CPXCR1Q8N123 301 aa15.14■□□□□ 0.01
VPS33A-202ENST00000451053 ZNF296Q8WUU4 475 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms