RNA–Protein interactions for RNA: ENST00000451036.5

RFTN1-206, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 4

Gene RFTN1, Length 1,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-206ENST00000451036 PRAMEF19Q5SWL8 479 aa18.93■□□□□ 0.62
RFTN1-206ENST00000451036 SNRNP48Q6IEG0 339 aaKnown RBP18.93■□□□□ 0.62
RFTN1-206ENST00000451036 RASGRP2Q7LDG7 609 aa18.93■□□□□ 0.62
RFTN1-206ENST00000451036 PRPF38AQ8NAV1 312 aaKnown RBP18.93■□□□□ 0.62
RFTN1-206ENST00000451036 KIFC2Q96AC6 838 aa18.93■□□□□ 0.62
RFTN1-206ENST00000451036 MAML3Q96JK9 1138 aa18.93■□□□□ 0.62
RFTN1-206ENST00000451036 SYNPO2Q9UMS6 1093 aa18.93■□□□□ 0.62
RFTN1-206ENST00000451036 CCDC171Q6TFL3 1326 aa18.93■□□□□ 0.62
RFTN1-206ENST00000451036 RANBP6O60518 1105 aaKnown RBP18.92■□□□□ 0.62
RFTN1-206ENST00000451036 COL6A1P12109 1028 aa18.92■□□□□ 0.62
RFTN1-206ENST00000451036 HAND2P61296 217 aa18.92■□□□□ 0.62
RFTN1-206ENST00000451036 ANO1Q5XXA6 986 aa18.92■□□□□ 0.62
RFTN1-206ENST00000451036 TICAM2Q86XR7 235 aa18.92■□□□□ 0.62
RFTN1-206ENST00000451036 C7orf61Q8IZ16 206 aa18.92■□□□□ 0.62
RFTN1-206ENST00000451036 CPXCR1Q8N123 301 aa18.92■□□□□ 0.62
RFTN1-206ENST00000451036 TEX13BQ9BXU2 312 aa18.92■□□□□ 0.62
RFTN1-206ENST00000451036 SLC5A4Q9NY91 659 aa18.92■□□□□ 0.62
RFTN1-206ENST00000451036 STX8Q9UNK0 236 aa18.92■□□□□ 0.62
RFTN1-206ENST00000451036 ORC4O43929 436 aa18.91■□□□□ 0.62
RFTN1-206ENST00000451036 FGRP09769 529 aa18.91■□□□□ 0.62
RFTN1-206ENST00000451036 BMP3P12645 472 aa18.91■□□□□ 0.62
RFTN1-206ENST00000451036 SLC4A3P48751 1232 aa18.91■□□□□ 0.62
RFTN1-206ENST00000451036 KCTD2Q14681 263 aa18.91■□□□□ 0.62
RFTN1-206ENST00000451036 ZNF792Q3KQV3 632 aa18.91■□□□□ 0.62
RFTN1-206ENST00000451036 SLC38A10Q9HBR0 1119 aa18.91■□□□□ 0.62
RFTN1-206ENST00000451036 RAVER2Q9HCJ3 691 aaKnown RBP18.91■□□□□ 0.62
RFTN1-206ENST00000451036 RBM27Q9P2N5 1060 aaKnown RBP18.91■□□□□ 0.62
RFTN1-206ENST00000451036 FEM1BQ9UK73 627 aa18.91■□□□□ 0.62
RFTN1-206ENST00000451036 ISY1Q9ULR0 285 aaKnown RBP18.91■□□□□ 0.62
RFTN1-206ENST00000451036 TMEM232C9JQI7 657 aa18.9■□□□□ 0.62
RFTN1-206ENST00000451036 ZBED4O75132 1171 aa18.9■□□□□ 0.62
RFTN1-206ENST00000451036 MCCP23508 829 aa18.9■□□□□ 0.62
RFTN1-206ENST00000451036 COPB2P35606 906 aa18.9■□□□□ 0.62
RFTN1-206ENST00000451036 RRP12Q5JTH9 1297 aaKnown RBP18.9■□□□□ 0.62
RFTN1-206ENST00000451036 PRO3102Q9H379 93 aa18.9■□□□□ 0.62
RFTN1-206ENST00000451036 TOMM22Q9NS69 142 aa18.9■□□□□ 0.62
RFTN1-206ENST00000451036 ZMYND8Q9ULU4 1186 aaPredicted RBP18.9■□□□□ 0.62
RFTN1-206ENST00000451036 PLXNA1Q9UIW2 1896 aa18.89■□□□□ 0.61
RFTN1-206ENST00000451036 ATP2A1O14983 1001 aa18.89■□□□□ 0.61
RFTN1-206ENST00000451036 MSCO60682 206 aa18.89■□□□□ 0.61
RFTN1-206ENST00000451036 PDE4AP27815 886 aa18.89■□□□□ 0.61
RFTN1-206ENST00000451036 SLC1A4P43007 532 aa18.89■□□□□ 0.61
RFTN1-206ENST00000451036 FXR1P51114 621 aaKnown RBP eCLIP18.89■□□□□ 0.61
RFTN1-206ENST00000451036 CWC27Q6UX04 472 aaKnown RBP18.89■□□□□ 0.61
RFTN1-206ENST00000451036 KCTD1Q719H9 257 aa18.89■□□□□ 0.61
RFTN1-206ENST00000451036 TBC1D10CQ8IV04 446 aa18.89■□□□□ 0.61
RFTN1-206ENST00000451036 GMCL1Q96IK5 515 aa18.89■□□□□ 0.61
RFTN1-206ENST00000451036 MTMR7Q9Y216 660 aa18.89■□□□□ 0.61
RFTN1-206ENST00000451036 CTDP1Q9Y5B0 961 aaPredicted RBP18.89■□□□□ 0.61
RFTN1-206ENST00000451036 ZMYM6O95789 1325 aa18.89■□□□□ 0.61
RFTN1-206ENST00000451036 SEPT4O43236 478 aa18.88■□□□□ 0.61
RFTN1-206ENST00000451036 TAL1P17542 331 aaPredicted RBP18.88■□□□□ 0.61
RFTN1-206ENST00000451036 NOVP48745 357 aa18.88■□□□□ 0.61
RFTN1-206ENST00000451036 LRRC26Q2I0M4 334 aa18.88■□□□□ 0.61
RFTN1-206ENST00000451036 TINF2Q9BSI4 451 aa18.88■□□□□ 0.61
RFTN1-206ENST00000451036 DNAH12Q6ZR08 3092 aa18.88■□□□□ 0.61
RFTN1-206ENST00000451036 SMCHD1A6NHR9 2005 aa18.87■□□□□ 0.61
RFTN1-206ENST00000451036 SYN1P17600 705 aa18.87■□□□□ 0.61
RFTN1-206ENST00000451036 STAT2P52630 851 aa18.87■□□□□ 0.61
RFTN1-206ENST00000451036 PPP4R3BQ5MIZ7 849 aa18.87■□□□□ 0.61
RFTN1-206ENST00000451036 GJC2Q5T442 439 aaPredicted RBP18.87■□□□□ 0.61
RFTN1-206ENST00000451036 STAG1Q8WVM7 1258 aa18.87■□□□□ 0.61
RFTN1-206ENST00000451036 SENP6Q9GZR1 1112 aaPredicted RBP18.87■□□□□ 0.61
RFTN1-206ENST00000451036 DIAPH3Q9NSV4 1193 aa18.87■□□□□ 0.61
RFTN1-206ENST00000451036 DIS3Q9Y2L1 958 aaKnown RBP18.87■□□□□ 0.61
RFTN1-206ENST00000451036 ZNF536O15090 1300 aa18.86■□□□□ 0.61
RFTN1-206ENST00000451036 SNAP25P60880 206 aa18.86■□□□□ 0.61
RFTN1-206ENST00000451036 IKQ13123 557 aaPredicted RBP18.86■□□□□ 0.61
RFTN1-206ENST00000451036 HOMER2Q9NSB8 354 aa18.86■□□□□ 0.61
RFTN1-206ENST00000451036 NEDD4P46934 1319 aa18.85■□□□□ 0.61
RFTN1-206ENST00000451036 DNAJC25-GNG10A0A024R161 153 aa18.85■□□□□ 0.61
RFTN1-206ENST00000451036 DNM1LO00429 736 aa18.85■□□□□ 0.61
RFTN1-206ENST00000451036 GSPT1P15170 499 aaKnown RBP18.85■□□□□ 0.61
RFTN1-206ENST00000451036 OAZ1P54368 228 aa18.85■□□□□ 0.61
RFTN1-206ENST00000451036 AKNAD1Q5T1N1 836 aa18.85■□□□□ 0.61
RFTN1-206ENST00000451036 RCSD1Q6JBY9 416 aa18.85■□□□□ 0.61
RFTN1-206ENST00000451036 FAM160B2Q86V87 743 aa18.85■□□□□ 0.61
RFTN1-206ENST00000451036 CHURC1Q8WUH1 139 aa18.85■□□□□ 0.61
RFTN1-206ENST00000451036 DDX11Q96FC9 970 aa18.85■□□□□ 0.61
RFTN1-206ENST00000451036 AGBL1Q96MI9 1066 aa18.85■□□□□ 0.61
RFTN1-206ENST00000451036 TMEM47Q9BQJ4 181 aa18.85■□□□□ 0.61
RFTN1-206ENST00000451036 IL25Q9H293 177 aa18.85■□□□□ 0.61
RFTN1-206ENST00000451036 PLA2G6O60733 806 aa18.84■□□□□ 0.61
RFTN1-206ENST00000451036 MYCNP04198 464 aaPredicted RBP18.84■□□□□ 0.61
RFTN1-206ENST00000451036 ZNF865P0CJ78 1059 aaPredicted RBP18.84■□□□□ 0.61
RFTN1-206ENST00000451036 ATN1P54259 1190 aaPredicted RBP18.84■□□□□ 0.61
RFTN1-206ENST00000451036 MFAP1P55081 439 aaKnown RBP18.84■□□□□ 0.61
RFTN1-206ENST00000451036 CCDC96Q2M329 555 aa18.84■□□□□ 0.61
RFTN1-206ENST00000451036 TTBK2Q6IQ55 1244 aa18.84■□□□□ 0.61
RFTN1-206ENST00000451036 MFSD6Q6ZSS7 791 aa18.84■□□□□ 0.61
RFTN1-206ENST00000451036 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.84■□□□□ 0.61
RFTN1-206ENST00000451036 LENG1Q96BZ8 264 aaPredicted RBP18.84■□□□□ 0.61
RFTN1-206ENST00000451036 FGD4Q96M96 766 aa18.84■□□□□ 0.61
RFTN1-206ENST00000451036 TCP11L1Q9NUJ3 509 aa18.84■□□□□ 0.61
RFTN1-206ENST00000451036 NRBP1Q9UHY1 535 aa18.84■□□□□ 0.61
RFTN1-206ENST00000451036 PRR12Q9ULL5 1215 aa18.84■□□□□ 0.61
RFTN1-206ENST00000451036 LAMA3Q16787 3333 aa18.84■□□□□ 0.61
RFTN1-206ENST00000451036 SZT2Q5T011 3432 aa18.84■□□□□ 0.61
RFTN1-206ENST00000451036 SNAI1O95863 264 aaPredicted RBP18.83■□□□□ 0.6
RFTN1-206ENST00000451036 TTC22Q5TAA0 569 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms