RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 DDX19BQ9UMR2 479 aa12.22□□□□□ -0.45
LINC01004-202ENST00000450686 MYH4Q9Y623 1939 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 TRIM43BA6NCK2 446 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 KBTBD13C9JR72 458 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 WDR46O15213 610 aaKnown RBP12.21□□□□□ -0.45
LINC01004-202ENST00000450686 SEPT4O43236 478 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 MSCO60682 206 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 PGK1P00558 417 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 FCER1AP12319 257 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 ITGB8P26012 769 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 TMED8Q6PL24 325 aaPredicted RBP12.21□□□□□ -0.45
LINC01004-202ENST00000450686 TRIM43Q96BQ3 446 aaPredicted RBP12.21□□□□□ -0.45
LINC01004-202ENST00000450686 MMP19Q99542 508 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC01004-202ENST00000450686 MROH8Q9H579 483 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 PDLIM7Q9NR12 457 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 ATP8A2Q9NTI2 1148 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 STXBP5LQ9Y2K9 1186 aa12.21□□□□□ -0.45
LINC01004-202ENST00000450686 STRNO43815 780 aa12.2□□□□□ -0.46
LINC01004-202ENST00000450686 RAB11FIP3O75154 756 aa12.2□□□□□ -0.46
LINC01004-202ENST00000450686 PRDM1O75626 825 aa12.2□□□□□ -0.46
LINC01004-202ENST00000450686 TLE2Q04725 743 aa12.2□□□□□ -0.46
LINC01004-202ENST00000450686 GPR153Q6NV75 609 aa12.2□□□□□ -0.46
LINC01004-202ENST00000450686 EFCAB3Q8N7B9 438 aa12.2□□□□□ -0.46
LINC01004-202ENST00000450686 MB21D1Q8N884 522 aa12.2□□□□□ -0.46
LINC01004-202ENST00000450686 ARRDC4Q8NCT1 418 aa12.2□□□□□ -0.46
LINC01004-202ENST00000450686 REPS2Q8NFH8 660 aa12.2□□□□□ -0.46
LINC01004-202ENST00000450686 PRKAG2Q9UGJ0 569 aa12.2□□□□□ -0.46
LINC01004-202ENST00000450686 RIPK3Q9Y572 518 aa12.2□□□□□ -0.46
LINC01004-202ENST00000450686 MINDY4BA8MYZ0 360 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 POTEB2H3BUK9 544 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 M0R2C6 588 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 VWA5AO00534 786 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 RASA1P20936 1047 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 STAT3P40763 770 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 EPHB4P54760 987 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 UBE3CQ15386 1083 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 LRRCC1Q9C099 1032 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 SH2D4AQ9H788 454 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 EPB41L4AQ9HCS5 686 aaPredicted RBP12.19□□□□□ -0.46
LINC01004-202ENST00000450686 XPNPEP3Q9NQH7 507 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 RCAN3Q9UKA8 241 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 ZNF214Q9UL59 606 aaPredicted RBP12.19□□□□□ -0.46
LINC01004-202ENST00000450686 PPP1R9AQ9ULJ8 1098 aa12.19□□□□□ -0.46
LINC01004-202ENST00000450686 MYADML2A6NDP7 307 aa12.18□□□□□ -0.46
LINC01004-202ENST00000450686 GSG1L2A8MUP6 293 aa12.18□□□□□ -0.46
LINC01004-202ENST00000450686 PQBP1O60828 265 aaKnown RBP12.18□□□□□ -0.46
LINC01004-202ENST00000450686 ZNF865P0CJ78 1059 aaPredicted RBP12.18□□□□□ -0.46
LINC01004-202ENST00000450686 ZNF792Q3KQV3 632 aa12.18□□□□□ -0.46
LINC01004-202ENST00000450686 RIOX2Q8IUF8 465 aa12.18□□□□□ -0.46
LINC01004-202ENST00000450686 AMOTL1Q8IY63 956 aa12.18□□□□□ -0.46
LINC01004-202ENST00000450686 LRRC47Q8N1G4 583 aaKnown RBP12.18□□□□□ -0.46
LINC01004-202ENST00000450686 OSBP2Q969R2 916 aa12.18□□□□□ -0.46
LINC01004-202ENST00000450686 CCDC17Q96LX7 622 aa12.18□□□□□ -0.46
LINC01004-202ENST00000450686 STRBPQ96SI9 672 aaKnown RBP12.18□□□□□ -0.46
LINC01004-202ENST00000450686 TINF2Q9BSI4 451 aa12.18□□□□□ -0.46
LINC01004-202ENST00000450686 KANSL2Q9H9L4 492 aa12.18□□□□□ -0.46
LINC01004-202ENST00000450686 GOPCQ9HD26 462 aa12.18□□□□□ -0.46
LINC01004-202ENST00000450686 ADAMTS5Q9UNA0 930 aa12.18□□□□□ -0.46
LINC01004-202ENST00000450686 DDX49Q9Y6V7 483 aaKnown RBP12.18□□□□□ -0.46
LINC01004-202ENST00000450686 CHD9Q3L8U1 2897 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 A0A1W2PQ45 241 aaPredicted RBP12.17□□□□□ -0.46
LINC01004-202ENST00000450686 A0A1W2PQY0 241 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 ADCY6O43306 1168 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 NDUFB10O96000 172 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 RARBP10826 455 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 MS4A1P11836 297 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 PTGS1P23219 599 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 KCTD2Q14681 263 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 SNX17Q15036 470 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 SNRNP48Q6IEG0 339 aaKnown RBP12.17□□□□□ -0.46
LINC01004-202ENST00000450686 RASGRP2Q7LDG7 609 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 ABRAQ8N0Z2 381 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 CPXCR1Q8N123 301 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 OTUD7AQ8TE49 926 aaPredicted RBP12.17□□□□□ -0.46
LINC01004-202ENST00000450686 DDRGK1Q96HY6 314 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 SEC62Q99442 399 aaKnown RBP12.17□□□□□ -0.46
LINC01004-202ENST00000450686 SLF1Q9BQI6 1058 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 SLC5A4Q9NY91 659 aa12.17□□□□□ -0.46
LINC01004-202ENST00000450686 F5H6K3 240 aa12.16□□□□□ -0.46
LINC01004-202ENST00000450686 SLC25A27O95847 323 aa12.16□□□□□ -0.46
LINC01004-202ENST00000450686 KLRC3Q07444 240 aa12.16□□□□□ -0.46
LINC01004-202ENST00000450686 ZNF697Q5TEC3 545 aa12.16□□□□□ -0.46
LINC01004-202ENST00000450686 MYLIPQ8WY64 445 aa12.16□□□□□ -0.46
LINC01004-202ENST00000450686 KIFC2Q96AC6 838 aa12.16□□□□□ -0.46
LINC01004-202ENST00000450686 CDX2Q99626 313 aaPredicted RBP12.16□□□□□ -0.46
LINC01004-202ENST00000450686 COL25A1Q9BXS0 654 aaPredicted RBP12.16□□□□□ -0.46
LINC01004-202ENST00000450686 TTYH1Q9H313 450 aaPredicted RBP12.16□□□□□ -0.46
LINC01004-202ENST00000450686 MKNK2Q9HBH9 465 aa12.16□□□□□ -0.46
LINC01004-202ENST00000450686 RAVER2Q9HCJ3 691 aaKnown RBP12.16□□□□□ -0.46
LINC01004-202ENST00000450686 ECHDC1Q9NTX5 307 aa12.16□□□□□ -0.46
LINC01004-202ENST00000450686 ARPP21Q9UBL0 812 aaPredicted RBP12.16□□□□□ -0.46
LINC01004-202ENST00000450686 CLIP2Q9UDT6 1046 aa12.16□□□□□ -0.46
LINC01004-202ENST00000450686 ZHX1Q9UKY1 873 aaPredicted RBP12.16□□□□□ -0.46
LINC01004-202ENST00000450686 PHF24Q9UPV7 400 aa12.16□□□□□ -0.46
LINC01004-202ENST00000450686 TTC28Q96AY4 2481 aa12.16□□□□□ -0.46
LINC01004-202ENST00000450686 SYNRGQ9UMZ2 1314 aa12.15□□□□□ -0.46
LINC01004-202ENST00000450686 GPAA1O43292 621 aa12.15□□□□□ -0.46
LINC01004-202ENST00000450686 ADAMTS4O75173 837 aa12.15□□□□□ -0.46
LINC01004-202ENST00000450686 SNAI1O95863 264 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms