RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CCDC129Q6ZRS4 1044 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 ELOA2Q8IYF1 753 aaPredicted RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 ZNF513Q8N8E2 541 aaPredicted RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 TRIM58Q8NG06 486 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 ANKRD24Q8TF21 1146 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 HDAC7Q8WUI4 952 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 CAVIN3Q969G5 261 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 YIPF3Q9GZM5 350 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 REXO2Q9Y3B8 237 aaKnown RBP9.62□□□□□ -0.87
LSM5-208ENST00000450169 LAMA4Q16363 1823 aa9.62□□□□□ -0.87
LSM5-208ENST00000450169 SETD1BQ9UPS6 1966 aaKnown RBP9.61□□□□□ -0.87
LSM5-208ENST00000450169 ADAMTS13Q76LX8 1427 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 ZNF185O15231 689 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 DNAJC8O75937 253 aaPredicted RBP9.61□□□□□ -0.87
LSM5-208ENST00000450169 NDUFA10O95299 355 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 LTKP29376 864 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 ELF3P78545 371 aaPredicted RBP9.61□□□□□ -0.87
LSM5-208ENST00000450169 LACTB2Q53H82 288 aaPredicted RBP9.61□□□□□ -0.87
LSM5-208ENST00000450169 HDGFL1Q5TGJ6 251 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 ARMC3Q5W041 872 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 SLC30A9Q6PML9 568 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 MMGT1Q8N4V1 131 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 TRIML1Q8N9V2 468 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 EDC3Q96F86 508 aaKnown RBP9.61□□□□□ -0.87
LSM5-208ENST00000450169 OSBPL9Q96SU4 736 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 GJB4Q9NTQ9 266 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 DMGDHQ9UI17 866 aaKnown RBP9.61□□□□□ -0.87
LSM5-208ENST00000450169 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.61□□□□□ -0.87
LSM5-208ENST00000450169 ZNF609O15014 1411 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 COQ9O75208 318 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 SASH1O94885 1247 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 ANP32DO95626 131 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 NEFHP12036 1026 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 TEFQ10587 303 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 PTPAQ15257 358 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 EZH2Q15910 746 aaKnown RBP9.61□□□□□ -0.87
LSM5-208ENST00000450169 CCDC122Q5T0U0 273 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 TXNDC2Q86VQ3 553 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 MTMR14Q8NCE2 650 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 P3H4Q92791 437 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 NUP88Q99567 741 aaPredicted RBP9.61□□□□□ -0.87
LSM5-208ENST00000450169 LRRC1Q9BTT6 524 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 PPANQ9NQ55 473 aaKnown RBP9.61□□□□□ -0.87
LSM5-208ENST00000450169 LIMD1Q9UGP4 676 aa9.61□□□□□ -0.87
LSM5-208ENST00000450169 EPN1Q9Y6I3 576 aaPredicted RBP9.61□□□□□ -0.87
LSM5-208ENST00000450169 CPS1P31327 1500 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 ZNF233A6NK53 670 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 LIN7AO14910 233 aaPredicted RBP9.6□□□□□ -0.87
LSM5-208ENST00000450169 CSB-PGBD3P0DP91 1061 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 SARSP49591 514 aaKnown RBP9.6□□□□□ -0.87
LSM5-208ENST00000450169 GLE1Q53GS7 698 aaKnown RBP9.6□□□□□ -0.87
LSM5-208ENST00000450169 TTC39AQ5SRH9 613 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 CFAP58Q5T655 872 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 SPATA1Q5VX52 437 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 PPP4R3AQ6IN85 833 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 TRIM74Q86UV6 250 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 TRIM73Q86UV7 250 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 CCHCR1Q8TD31 782 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 NUP133Q8WUM0 1156 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 JADE2Q9NQC1 790 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 MYH8P13535 1937 aa9.6□□□□□ -0.87
LSM5-208ENST00000450169 ANO9A1A5B4 782 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 GMNCA6NCL1 334 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 ATP2C2O75185 946 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 CDC25CP30307 473 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 MCMDC2Q4G0Z9 681 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 CWF19L1Q69YN2 538 aaKnown RBP9.59□□□□□ -0.87
LSM5-208ENST00000450169 HIBCHQ6NVY1 386 aaPredicted RBP9.59□□□□□ -0.87
LSM5-208ENST00000450169 CHST3Q7LGC8 479 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 MFN1Q8IWA4 741 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 ATP6V1G3Q96LB4 118 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 ZNF570Q96NI8 536 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 PCDHGC5Q9Y5F6 944 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 SYNRGQ9UMZ2 1314 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 RGPD1P0DJD0 1748 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 TECPR2O15040 1411 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 PI4KAP2A4QPH2 592 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 HMGB1P1B2RPK0 211 aaPredicted RBP9.59□□□□□ -0.87
LSM5-208ENST00000450169 PYGLP06737 847 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 IDEP14735 1019 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 KRT9P35527 623 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 PAPOLAP51003 745 aaKnown RBP9.59□□□□□ -0.87
LSM5-208ENST00000450169 SLC7A5Q01650 507 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 G3BP1Q13283 466 aaKnown RBP eCLIP9.59□□□□□ -0.87
LSM5-208ENST00000450169 ITGB3BPQ13352 177 aaPredicted RBP9.59□□□□□ -0.87
LSM5-208ENST00000450169 LAMB3Q13751 1172 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 TRIM14Q14142 442 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 CDKAL1Q5VV42 579 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 CHRDL2Q6WN34 429 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 CACNA2D3Q8IZS8 1091 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 IQCKQ8N0W5 287 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 PI4KAP1Q8N8J0 262 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 HVCN1Q96D96 273 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 CCDC43Q96MW1 224 aaKnown RBP9.59□□□□□ -0.87
LSM5-208ENST00000450169 CHP1Q99653 195 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 STIM2Q9P246 746 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 LEMD3Q9Y2U8 911 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 MAP3K15Q6ZN16 1313 aa9.59□□□□□ -0.87
LSM5-208ENST00000450169 RNF225M0QZC1 329 aaPredicted RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 KRT86O43790 486 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms