RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 BRD3Q15059 726 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 ZNF658Q5TYW1 1059 aaPredicted RBP12.74□□□□□ -0.37
SYVN1-204ENST00000449943 KAT14Q9H8E8 782 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
SYVN1-204ENST00000449943 FAM205AQ6ZU69 1335 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 COL4A1P02462 1669 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 LDHCP07864 332 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 GPS2Q13227 327 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 UBE4AQ14139 1066 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 SLF2Q8IX21 1173 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 ABCB6Q9NP58 842 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 RMND1Q9NWS8 449 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 VPS18Q9P253 973 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 ARAP2Q8WZ64 1704 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 PFKFB3Q16875 520 aaPredicted RBP12.74□□□□□ -0.37
SYVN1-204ENST00000449943 TPTE2Q6XPS3 522 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 TRIM47Q96LD4 638 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 TCEAL9Q9UHQ7 104 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 MYH2Q9UKX2 1941 aa12.74□□□□□ -0.37
SYVN1-204ENST00000449943 CCDC194A0A1B0GVG4 234 aa12.73□□□□□ -0.37
SYVN1-204ENST00000449943 PARP1P09874 1014 aaKnown RBP12.73□□□□□ -0.37
SYVN1-204ENST00000449943 BLIDQ8IZY5 108 aa12.73□□□□□ -0.37
SYVN1-204ENST00000449943 NSUN4Q96CB9 384 aaKnown RBP12.73□□□□□ -0.37
SYVN1-204ENST00000449943 PCMTD1Q96MG8 357 aaPredicted RBP12.73□□□□□ -0.37
SYVN1-204ENST00000449943 RTCBQ9Y3I0 505 aaKnown RBP12.73□□□□□ -0.37
SYVN1-204ENST00000449943 DUOX1Q9NRD9 1551 aa12.73□□□□□ -0.37
SYVN1-204ENST00000449943 USP17L8P0C7I0 530 aa12.73□□□□□ -0.37
SYVN1-204ENST00000449943 SPTY2D1Q68D10 685 aaPredicted RBP12.73□□□□□ -0.37
SYVN1-204ENST00000449943 STAG2Q8N3U4 1231 aa12.73□□□□□ -0.37
SYVN1-204ENST00000449943 ITIH6Q6UXX5 1313 aa12.73□□□□□ -0.37
SYVN1-204ENST00000449943 MYH6P13533 1939 aa12.73□□□□□ -0.37
SYVN1-204ENST00000449943 BAZ2AQ9UIF9 1905 aaKnown RBP12.73□□□□□ -0.37
SYVN1-204ENST00000449943 ERLIN1O75477 346 aa12.73□□□□□ -0.37
SYVN1-204ENST00000449943 RBM5P52756 815 aaKnown RBP eCLIP12.73□□□□□ -0.379e-8■■■□□ 15.5
SYVN1-204ENST00000449943 HEATR3Q7Z4Q2 680 aa12.73□□□□□ -0.37
SYVN1-204ENST00000449943 ABCA3Q99758 1704 aa12.73□□□□□ -0.37
SYVN1-204ENST00000449943 A0A0U1RQG5 324 aaPredicted RBP12.72□□□□□ -0.37
SYVN1-204ENST00000449943 PMS1P54277 932 aaKnown RBP12.72□□□□□ -0.37
SYVN1-204ENST00000449943 VSNL1P62760 191 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 FAM193AP78312 1265 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 TFAP4Q01664 338 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 NOA1Q8NC60 698 aaKnown RBP12.72□□□□□ -0.37
SYVN1-204ENST00000449943 DYNLL2Q96FJ2 89 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 HDAC6Q9UBN7 1215 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 DISP2A7MBM2 1401 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 BCORQ6W2J9 1755 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 TTC26A0AVF1 554 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 PHACTR2O75167 634 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 KIF5BP33176 963 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 ARHGAP25P42331 645 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 ATP2B2Q01814 1243 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 INF2Q27J81 1249 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 TXLNBQ8N3L3 684 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 ZFP91Q96JP5 570 aaPredicted RBP12.72□□□□□ -0.37
SYVN1-204ENST00000449943 UBXN6Q9BZV1 441 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 MKNK2Q9HBH9 465 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 MAGEC2Q9UBF1 373 aaPredicted RBP12.72□□□□□ -0.37
SYVN1-204ENST00000449943 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
SYVN1-204ENST00000449943 N4BP1O75113 896 aaKnown RBP12.72□□□□□ -0.37
SYVN1-204ENST00000449943 UBA7P41226 1012 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 SOGA3Q5TF21 947 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 DTHD1Q6ZMT9 781 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 HDXQ7Z353 690 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 CCDC102AQ96A19 550 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 CAPZA3Q96KX2 299 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 BSDC1Q9NW68 430 aaPredicted RBP12.72□□□□□ -0.37
SYVN1-204ENST00000449943 EPN1Q9Y6I3 576 aaPredicted RBP12.72□□□□□ -0.37
SYVN1-204ENST00000449943 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
SYVN1-204ENST00000449943 GPIHBP1Q8IV16 184 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 MYO6Q9UM54 1294 aa12.72□□□□□ -0.37
SYVN1-204ENST00000449943 C6orf229H3BNL8 230 aa12.71□□□□□ -0.37
SYVN1-204ENST00000449943 NDUFA10O95299 355 aa12.71□□□□□ -0.37
SYVN1-204ENST00000449943 TRAPPC10P48553 1259 aa12.71□□□□□ -0.37
SYVN1-204ENST00000449943 BEND6Q5SZJ8 279 aaPredicted RBP12.71□□□□□ -0.37
SYVN1-204ENST00000449943 PYM1Q9BRP8 204 aaKnown RBP12.71□□□□□ -0.37
SYVN1-204ENST00000449943 TMEM60Q9H2L4 133 aa12.71□□□□□ -0.37
SYVN1-204ENST00000449943 DISC1Q9NRI5 854 aa12.71□□□□□ -0.37
SYVN1-204ENST00000449943 LUC7L2Q9Y383 392 aaKnown RBP12.71□□□□□ -0.37
SYVN1-204ENST00000449943 POTEB2H3BUK9 544 aa12.71□□□□□ -0.37
SYVN1-204ENST00000449943 CALML3P27482 149 aa12.71□□□□□ -0.37
SYVN1-204ENST00000449943 LONP1P36776 959 aaKnown RBP12.71□□□□□ -0.37
SYVN1-204ENST00000449943 ADAM21Q9UKJ8 722 aa12.71□□□□□ -0.37
SYVN1-204ENST00000449943 PLCH1Q4KWH8 1693 aa12.71□□□□□ -0.37
SYVN1-204ENST00000449943 B4DLN1 442 aa12.71□□□□□ -0.38
SYVN1-204ENST00000449943 SRGAP2O75044 1071 aa12.71□□□□□ -0.38
SYVN1-204ENST00000449943 HIBADHP31937 336 aaKnown RBP12.71□□□□□ -0.38
SYVN1-204ENST00000449943 TRIM14Q14142 442 aa12.71□□□□□ -0.38
SYVN1-204ENST00000449943 TYW1BQ6NUM6 668 aa12.71□□□□□ -0.38
SYVN1-204ENST00000449943 KIAA1328Q86T90 577 aa12.71□□□□□ -0.38
SYVN1-204ENST00000449943 PNMA1Q8ND90 353 aa12.71□□□□□ -0.38
SYVN1-204ENST00000449943 CPVLQ9H3G5 476 aa12.71□□□□□ -0.38
SYVN1-204ENST00000449943 BCL9LQ86UU0 1499 aa12.71□□□□□ -0.38
SYVN1-204ENST00000449943 USP17L3A6NCW0 530 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 USP17L4A6NCW7 530 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 KCNQ2O43526 872 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 ORC4O43929 436 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 BAG3O95817 575 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 GOLGA8HP0CJ92 632 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 CCDC122Q5T0U0 273 aa12.7□□□□□ -0.38
SYVN1-204ENST00000449943 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms