RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 SNAI1O95863 264 aaPredicted RBP16.55■□□□□ 0.24
CPSF7-207ENST00000449811 PDE6AP16499 860 aa16.55■□□□□ 0.24
CPSF7-207ENST00000449811 CST5P28325 142 aaPredicted RBP16.55■□□□□ 0.24
CPSF7-207ENST00000449811 CDK7P50613 346 aa16.55■□□□□ 0.24
CPSF7-207ENST00000449811 TTF1Q15361 905 aaPredicted RBP16.55■□□□□ 0.24
CPSF7-207ENST00000449811 VTI1AQ96AJ9 217 aa16.55■□□□□ 0.24
CPSF7-207ENST00000449811 ZNF214Q9UL59 606 aaPredicted RBP16.55■□□□□ 0.24
CPSF7-207ENST00000449811 PPP1R9AQ9ULJ8 1098 aa16.55■□□□□ 0.24
CPSF7-207ENST00000449811 ARVCFO00192 962 aa16.54■□□□□ 0.24
CPSF7-207ENST00000449811 ASGR1P07306 291 aa16.54■□□□□ 0.24
CPSF7-207ENST00000449811 C6orf222P0C671 652 aaPredicted RBP16.54■□□□□ 0.24
CPSF7-207ENST00000449811 EEF2P13639 858 aaKnown RBP16.54■□□□□ 0.24
CPSF7-207ENST00000449811 AACSQ86V21 672 aa16.54■□□□□ 0.24
CPSF7-207ENST00000449811 LCORLQ8N3X6 602 aa16.54■□□□□ 0.24
CPSF7-207ENST00000449811 PCSK9Q8NBP7 692 aaKnown RBP16.54■□□□□ 0.24
CPSF7-207ENST00000449811 REPS2Q8NFH8 660 aa16.54■□□□□ 0.24
CPSF7-207ENST00000449811 CCDC17Q96LX7 622 aa16.54■□□□□ 0.24
CPSF7-207ENST00000449811 C1QTNF1Q9BXJ1 281 aa16.54■□□□□ 0.24
CPSF7-207ENST00000449811 TSPYL2Q9H2G4 693 aaPredicted RBP16.54■□□□□ 0.24
CPSF7-207ENST00000449811 MTIF3Q9H2K0 278 aaKnown RBP16.54■□□□□ 0.24
CPSF7-207ENST00000449811 NKX2-4Q9H2Z4 354 aa16.54■□□□□ 0.24
CPSF7-207ENST00000449811 SLC28A3Q9HAS3 691 aa16.54■□□□□ 0.24
CPSF7-207ENST00000449811 CHD7Q9P2D1 2997 aa16.53■□□□□ 0.24
CPSF7-207ENST00000449811 ZNF532Q9HCE3 1301 aa16.53■□□□□ 0.24
CPSF7-207ENST00000449811 A0A0U1RQG5 324 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-207ENST00000449811 TLR3O15455 904 aaKnown RBP16.53■□□□□ 0.24
CPSF7-207ENST00000449811 IRX5P78411 483 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-207ENST00000449811 MAMDC4Q6UXC1 1216 aa16.53■□□□□ 0.24
CPSF7-207ENST00000449811 FAM126BQ8IXS8 530 aa16.53■□□□□ 0.24
CPSF7-207ENST00000449811 HERVK_113Q902F9 699 aa16.53■□□□□ 0.24
CPSF7-207ENST00000449811 NECAB3Q96P71 396 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-207ENST00000449811 SPC25Q9HBM1 224 aa16.53■□□□□ 0.24
CPSF7-207ENST00000449811 GOPCQ9HD26 462 aa16.53■□□□□ 0.24
CPSF7-207ENST00000449811 IL23AQ9NPF7 189 aa16.53■□□□□ 0.24
CPSF7-207ENST00000449811 CXXC1Q9P0U4 656 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-207ENST00000449811 RAD21O60216 631 aa16.52■□□□□ 0.24
CPSF7-207ENST00000449811 CYP2C18P33260 490 aa16.52■□□□□ 0.24
CPSF7-207ENST00000449811 FAM83BQ5T0W9 1011 aa16.52■□□□□ 0.24
CPSF7-207ENST00000449811 DDX11Q96FC9 970 aa16.52■□□□□ 0.24
CPSF7-207ENST00000449811 TEX13BQ9BXU2 312 aa16.52■□□□□ 0.24
CPSF7-207ENST00000449811 KANSL2Q9H9L4 492 aa16.52■□□□□ 0.24
CPSF7-207ENST00000449811 YBX2Q9Y2T7 364 aaKnown RBP16.52■□□□□ 0.24
CPSF7-207ENST00000449811 MYO9BQ13459 2157 aa16.51■□□□□ 0.23
CPSF7-207ENST00000449811 MYH8P13535 1937 aa16.51■□□□□ 0.23
CPSF7-207ENST00000449811 TCRBV5S4A2TA0A5A2 114 aa16.51■□□□□ 0.23
CPSF7-207ENST00000449811 ADCY6O43306 1168 aa16.51■□□□□ 0.23
CPSF7-207ENST00000449811 BMP1P13497 986 aa16.51■□□□□ 0.23
CPSF7-207ENST00000449811 HOXD11P31277 338 aaPredicted RBP16.51■□□□□ 0.23
CPSF7-207ENST00000449811 CDK8P49336 464 aa16.51■□□□□ 0.23
CPSF7-207ENST00000449811 ACVR2BQ13705 512 aa16.51■□□□□ 0.23
CPSF7-207ENST00000449811 GNASQ5JWF2 1037 aa16.51■□□□□ 0.23
CPSF7-207ENST00000449811 SNRNP48Q6IEG0 339 aaKnown RBP16.51■□□□□ 0.23
CPSF7-207ENST00000449811 ZNF467Q7Z7K2 595 aaPredicted RBP16.51■□□□□ 0.23
CPSF7-207ENST00000449811 MICALL1Q8N3F8 863 aa16.51■□□□□ 0.23
CPSF7-207ENST00000449811 UPF3AQ9H1J1 476 aaKnown RBP16.51■□□□□ 0.23
CPSF7-207ENST00000449811 ARMT1Q9H993 441 aa16.51■□□□□ 0.23
CPSF7-207ENST00000449811 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.51■□□□□ 0.23
CPSF7-207ENST00000449811 REV3LO60673 3130 aa16.51■□□□□ 0.23
CPSF7-207ENST00000449811 DNAJC25-GNG10A0A024R161 153 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 SMIM22K7EJ46 135 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 PRKAB2O43741 272 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 CD4P01730 458 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 FGBP02675 491 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 GJA9P57773 515 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 AAK1Q2M2I8 961 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 CCDC144BQ3MJ40 725 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 ZKSCAN2Q63HK3 967 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 ERC1Q8IUD2 1116 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 ABHD16BQ9H3Z7 469 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 ATP8A2Q9NTI2 1148 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 RIPK3Q9Y572 518 aa16.5■□□□□ 0.23
CPSF7-207ENST00000449811 CYP2D7A0A087X1C5 515 aa16.49■□□□□ 0.23
CPSF7-207ENST00000449811 GOLIM4O00461 696 aa16.49■□□□□ 0.23
CPSF7-207ENST00000449811 TFF2Q03403 129 aa16.49■□□□□ 0.23
CPSF7-207ENST00000449811 C12orf60Q5U649 245 aa16.49■□□□□ 0.23
CPSF7-207ENST00000449811 PPP2R2DQ66LE6 453 aa16.49■□□□□ 0.23
CPSF7-207ENST00000449811 C16orf86Q6ZW13 317 aa16.49■□□□□ 0.23
CPSF7-207ENST00000449811 AMOTL1Q8IY63 956 aa16.49■□□□□ 0.23
CPSF7-207ENST00000449811 DNAJC2Q99543 621 aaKnown RBP16.49■□□□□ 0.23
CPSF7-207ENST00000449811 SLF1Q9BQI6 1058 aa16.49■□□□□ 0.23
CPSF7-207ENST00000449811 HIPK3Q9H422 1215 aa16.49■□□□□ 0.23
CPSF7-207ENST00000449811 EXOC6BQ9Y2D4 811 aa16.49■□□□□ 0.23
CPSF7-207ENST00000449811 NCOR1O75376 2440 aa16.48■□□□□ 0.23
CPSF7-207ENST00000449811 MBD4O95243 580 aa16.48■□□□□ 0.23
CPSF7-207ENST00000449811 SLC4A3P48751 1232 aa16.48■□□□□ 0.23
CPSF7-207ENST00000449811 RABGGTBP53611 331 aa16.48■□□□□ 0.23
CPSF7-207ENST00000449811 OTOP2Q7RTS6 562 aa16.48■□□□□ 0.23
CPSF7-207ENST00000449811 NUP88Q99567 741 aaPredicted RBP16.48■□□□□ 0.23
CPSF7-207ENST00000449811 USP17L12C9JPN9 530 aa16.47■□□□□ 0.23
CPSF7-207ENST00000449811 USP17L21D6R901 530 aa16.47■□□□□ 0.23
CPSF7-207ENST00000449811 KCNQ1P51787 676 aa16.47■□□□□ 0.23
CPSF7-207ENST00000449811 SKIV2LQ15477 1246 aaKnown RBP16.47■□□□□ 0.23
CPSF7-207ENST00000449811 ARMCX2Q7L311 632 aa16.47■□□□□ 0.23
CPSF7-207ENST00000449811 IL1RAPL2Q9NP60 686 aa16.47■□□□□ 0.23
CPSF7-207ENST00000449811 HCN4Q9Y3Q4 1203 aa16.47■□□□□ 0.23
CPSF7-207ENST00000449811 BDP1A6H8Y1 2624 aa16.47■□□□□ 0.23
CPSF7-207ENST00000449811 UMODL1Q5DID0 1318 aa16.46■□□□□ 0.23
CPSF7-207ENST00000449811 TCF20Q9UGU0 1960 aaKnown RBP16.46■□□□□ 0.23
CPSF7-207ENST00000449811 ATP2A1O14983 1001 aa16.46■□□□□ 0.23
CPSF7-207ENST00000449811 CTAGE5O15320 804 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms