RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 SPATC1LQ9H0A9 340 aa12.12□□□□□ -0.47
LINC02561-201ENST00000449457 KIAA1683Q9H0B3 1180 aa12.12□□□□□ -0.47
LINC02561-201ENST00000449457 CCDC8Q9H0W5 538 aaPredicted RBP12.12□□□□□ -0.47
LINC02561-201ENST00000449457 A0A1W2PQ45 241 aaPredicted RBP12.11□□□□□ -0.47
LINC02561-201ENST00000449457 A0A1W2PQY0 241 aa12.11□□□□□ -0.47
LINC02561-201ENST00000449457 MSCO60682 206 aa12.11□□□□□ -0.47
LINC02561-201ENST00000449457 UQCRFS1P1P0C7P4 283 aa12.11□□□□□ -0.47
LINC02561-201ENST00000449457 ACRP10323 421 aa12.11□□□□□ -0.47
LINC02561-201ENST00000449457 PTGS1P23219 599 aa12.11□□□□□ -0.47
LINC02561-201ENST00000449457 G3BP1Q13283 466 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC02561-201ENST00000449457 ADGRE1Q14246 886 aa12.11□□□□□ -0.47
LINC02561-201ENST00000449457 PPP4R3BQ5MIZ7 849 aa12.11□□□□□ -0.47
LINC02561-201ENST00000449457 TATDN1Q6P1N9 297 aa12.11□□□□□ -0.47
LINC02561-201ENST00000449457 LBX2Q6XYB7 198 aa12.11□□□□□ -0.47
LINC02561-201ENST00000449457 MICALL1Q8N3F8 863 aa12.11□□□□□ -0.47
LINC02561-201ENST00000449457 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC02561-201ENST00000449457 API5Q9BZZ5 524 aaKnown RBP12.11□□□□□ -0.47
LINC02561-201ENST00000449457 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
LINC02561-201ENST00000449457 ZNF576Q9H609 170 aa12.11□□□□□ -0.47
LINC02561-201ENST00000449457 DBNLQ9UJU6 430 aaKnown RBP12.11□□□□□ -0.47
LINC02561-201ENST00000449457 ZNFX1Q9P2E3 1918 aaKnown RBP12.11□□□□□ -0.47
LINC02561-201ENST00000449457 BCAR3O75815 825 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 MAP4K4O95819 1239 aaPredicted RBP12.1□□□□□ -0.47
LINC02561-201ENST00000449457 RAG1P15918 1043 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 FPGSQ05932 587 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 OS9Q13438 667 aaPredicted RBP12.1□□□□□ -0.47
LINC02561-201ENST00000449457 MTX1Q13505 466 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 OLFML2BQ68BL8 750 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 PADI6Q6TGC4 694 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 ARRDC4Q8NCT1 418 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 ADAMTS19Q8TE59 1207 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 TIFAQ96CG3 184 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 DYNLL2Q96FJ2 89 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 MAML3Q96JK9 1138 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 XPNPEP3Q9NQH7 507 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 FBXO28Q9NVF7 368 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 SERPINB13Q9UIV8 391 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 MYO9BQ13459 2157 aa12.1□□□□□ -0.47
LINC02561-201ENST00000449457 USP14P54578 494 aa12.09□□□□□ -0.47
LINC02561-201ENST00000449457 FAAP100Q0VG06 881 aa12.09□□□□□ -0.47
LINC02561-201ENST00000449457 AMHR2Q16671 573 aa12.09□□□□□ -0.47
LINC02561-201ENST00000449457 CCDC129Q6ZRS4 1044 aa12.09□□□□□ -0.47
LINC02561-201ENST00000449457 SDR42E1Q8WUS8 393 aa12.09□□□□□ -0.47
LINC02561-201ENST00000449457 PBX4Q9BYU1 374 aa12.09□□□□□ -0.47
LINC02561-201ENST00000449457 PPP1R12CQ9BZL4 782 aa12.09□□□□□ -0.47
LINC02561-201ENST00000449457 TMEM39AQ9NV64 488 aa12.09□□□□□ -0.47
LINC02561-201ENST00000449457 PHF24Q9UPV7 400 aa12.09□□□□□ -0.47
LINC02561-201ENST00000449457 MYH8P13535 1937 aa12.08□□□□□ -0.48
LINC02561-201ENST00000449457 CYP2D7A0A087X1C5 515 aa12.08□□□□□ -0.48
LINC02561-201ENST00000449457 ADCY6O43306 1168 aa12.08□□□□□ -0.48
LINC02561-201ENST00000449457 FLOT1O75955 427 aa12.08□□□□□ -0.48
LINC02561-201ENST00000449457 CHGBP05060 677 aa12.08□□□□□ -0.48
LINC02561-201ENST00000449457 IGFBP4P22692 258 aa12.08□□□□□ -0.48
LINC02561-201ENST00000449457 RARSP54136 660 aaKnown RBP12.08□□□□□ -0.48
LINC02561-201ENST00000449457 TMEM132BQ14DG7 1078 aa12.08□□□□□ -0.48
LINC02561-201ENST00000449457 C16orf59Q7L2K0 433 aa12.08□□□□□ -0.48
LINC02561-201ENST00000449457 SYMPKQ92797 1274 aaKnown RBP12.08□□□□□ -0.48
LINC02561-201ENST00000449457 FRAT1Q92837 279 aaPredicted RBP12.08□□□□□ -0.48
LINC02561-201ENST00000449457 BAZ2AQ9UIF9 1905 aaKnown RBP12.07□□□□□ -0.48
LINC02561-201ENST00000449457 MCM3APO60318 1980 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 APBB1O00213 710 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 KIAA0355O15063 1070 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 RAD21O60216 631 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 GNAI2P04899 355 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 POLR3DP05423 398 aaPredicted RBP12.07□□□□□ -0.48
LINC02561-201ENST00000449457 GNAI3P08754 354 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 RARBP10826 455 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 TRIM27P14373 513 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 AKR1B1P15121 316 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 TFF2Q03403 129 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 CCDC158Q5M9N0 1113 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 PARP9Q8IXQ6 854 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 IL27Q8NEV9 243 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 UHRF1Q96T88 793 aaPredicted RBP12.07□□□□□ -0.48
LINC02561-201ENST00000449457 NKX2-4Q9H2Z4 354 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 CABP5Q9NP86 173 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 THEGQ9P2T0 379 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 DDX49Q9Y6V7 483 aaKnown RBP12.07□□□□□ -0.48
LINC02561-201ENST00000449457 UMODL1Q5DID0 1318 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 SYNRGQ9UMZ2 1314 aa12.07□□□□□ -0.48
LINC02561-201ENST00000449457 ADAMTS4O75173 837 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 MYOGP15173 224 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 CSF2RAP15509 400 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 SLC4A3P48751 1232 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 RABGGTBP53611 331 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 COG2Q14746 738 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 ATF7IPQ6VMQ6 1270 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 SIAH1Q8IUQ4 282 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 TMEM57Q8N5G2 664 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 EAF2Q96CJ1 260 aaPredicted RBP12.06□□□□□ -0.48
LINC02561-201ENST00000449457 PHOX2BQ99453 314 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 MMP19Q99542 508 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 NUP88Q99567 741 aaPredicted RBP12.06□□□□□ -0.48
LINC02561-201ENST00000449457 RIOK1Q9BRS2 568 aaKnown RBP12.06□□□□□ -0.48
LINC02561-201ENST00000449457 EHD4Q9H223 541 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 GINM1Q9NU53 330 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 CXXC1Q9P0U4 656 aaPredicted RBP12.06□□□□□ -0.48
LINC02561-201ENST00000449457 YBX2Q9Y2T7 364 aaKnown RBP12.06□□□□□ -0.48
LINC02561-201ENST00000449457 GTF3C3Q9Y5Q9 886 aa12.06□□□□□ -0.48
LINC02561-201ENST00000449457 TACC3Q9Y6A5 838 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms