RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 FEM1BQ9UK73 627 aa22.28■■□□□ 1.16
RPS28-202ENST00000449223 TMEM232C9JQI7 657 aa22.27■■□□□ 1.16
RPS28-202ENST00000449223 CHURC1Q8WUH1 139 aa22.27■■□□□ 1.16
RPS28-202ENST00000449223 AIFM3Q96NN9 605 aa22.27■■□□□ 1.16
RPS28-202ENST00000449223 ZNF408Q9H9D4 720 aa22.27■■□□□ 1.16
RPS28-202ENST00000449223 RLFQ13129 1914 aa22.27■■□□□ 1.16
RPS28-202ENST00000449223 XBP1P17861 261 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 SYDE2Q5VT97 1194 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 A0A0G2JLL6 359 aaPredicted RBP22.26■■□□□ 1.15
RPS28-202ENST00000449223 PNMA6FA0A0J9YX94 578 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 H3BQV1 296 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 ZBTB5O15062 677 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 SLC16A2P36021 539 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 HMGCS2P54868 508 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 IFFO2Q5TF58 517 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 PRRT2Q7Z6L0 340 aaPredicted RBP22.26■■□□□ 1.15
RPS28-202ENST00000449223 SMC1BQ8NDV3 1235 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 CNKSR2Q8WXI2 1034 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 OPTNQ96CV9 577 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 PIGSQ96S52 555 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 BARHL2Q9NY43 387 aa22.26■■□□□ 1.15
RPS28-202ENST00000449223 SEC63Q9UGP8 760 aaKnown RBP22.26■■□□□ 1.15
RPS28-202ENST00000449223 hCG_1642624A0A1W2PR95 340 aa22.25■■□□□ 1.15
RPS28-202ENST00000449223 VPS37CA5D8V6 355 aaPredicted RBP22.25■■□□□ 1.15
RPS28-202ENST00000449223 IRF6O14896 467 aa22.25■■□□□ 1.15
RPS28-202ENST00000449223 F13A1P00488 732 aa22.25■■□□□ 1.15
RPS28-202ENST00000449223 TRIM29Q14134 588 aa22.25■■□□□ 1.15
RPS28-202ENST00000449223 KRT40Q6A162 431 aa22.25■■□□□ 1.15
RPS28-202ENST00000449223 PROCA1Q8NCQ7 364 aaPredicted RBP22.25■■□□□ 1.15
RPS28-202ENST00000449223 SHISA4Q96DD7 197 aa22.25■■□□□ 1.15
RPS28-202ENST00000449223 OTUD5Q96G74 571 aa22.25■■□□□ 1.15
RPS28-202ENST00000449223 PRR12Q9ULL5 1215 aa22.25■■□□□ 1.15
RPS28-202ENST00000449223 MMP1P03956 469 aa22.24■■□□□ 1.15
RPS28-202ENST00000449223 CLEC17AQ6ZS10 378 aa22.24■■□□□ 1.15
RPS28-202ENST00000449223 SLC10A4Q96EP9 437 aa22.24■■□□□ 1.15
RPS28-202ENST00000449223 PHF20Q9BVI0 1012 aa22.24■■□□□ 1.15
RPS28-202ENST00000449223 GJB4Q9NTQ9 266 aa22.24■■□□□ 1.15
RPS28-202ENST00000449223 TMOD4Q9NZQ9 345 aa22.24■■□□□ 1.15
RPS28-202ENST00000449223 TOMM70O94826 608 aa22.23■■□□□ 1.15
RPS28-202ENST00000449223 WWC2Q6AWC2 1192 aa22.23■■□□□ 1.15
RPS28-202ENST00000449223 RANBP17Q9H2T7 1088 aaKnown RBP22.23■■□□□ 1.15
RPS28-202ENST00000449223 ZSCAN16Q9H4T2 348 aaPredicted RBP22.23■■□□□ 1.15
RPS28-202ENST00000449223 RPAP3Q9H6T3 665 aaPredicted RBP22.23■■□□□ 1.15
RPS28-202ENST00000449223 ESYT2A0FGR8 921 aa22.22■■□□□ 1.15
RPS28-202ENST00000449223 STXBP3O00186 592 aa22.22■■□□□ 1.15
RPS28-202ENST00000449223 DGKZQ13574 1117 aa22.22■■□□□ 1.15
RPS28-202ENST00000449223 CDC37Q16543 378 aaPredicted RBP22.22■■□□□ 1.15
RPS28-202ENST00000449223 PPP1R18Q6NYC8 613 aa22.22■■□□□ 1.15
RPS28-202ENST00000449223 HOMER1Q86YM7 354 aa22.22■■□□□ 1.15
RPS28-202ENST00000449223 PRPF38AQ8NAV1 312 aaKnown RBP22.22■■□□□ 1.15
RPS28-202ENST00000449223 TNPO1Q92973 898 aaKnown RBP22.22■■□□□ 1.15
RPS28-202ENST00000449223 VAT1LQ9HCJ6 419 aa22.22■■□□□ 1.15
RPS28-202ENST00000449223 VPS54Q9P1Q0 977 aa22.22■■□□□ 1.15
RPS28-202ENST00000449223 ISY1Q9ULR0 285 aaKnown RBP22.22■■□□□ 1.15
RPS28-202ENST00000449223 MYH15Q9Y2K3 1946 aa22.22■■□□□ 1.15
RPS28-202ENST00000449223 MYPNQ86TC9 1320 aa22.22■■□□□ 1.15
RPS28-202ENST00000449223 FDX1P10109 184 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 GJA5P36382 358 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 IKQ13123 557 aaPredicted RBP22.21■■□□□ 1.15
RPS28-202ENST00000449223 NPY5RQ15761 445 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 QRICH1Q2TAL8 776 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 OTUD7BQ6GQQ9 843 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 GALNT17Q6IS24 598 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 CCDC148Q8NFR7 591 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 CCDC12Q8WUD4 166 aaPredicted RBP22.21■■□□□ 1.15
RPS28-202ENST00000449223 SLF1Q9BQI6 1058 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 PPP1R9AQ9ULJ8 1098 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 PPP1R11O60927 126 aaPredicted RBP22.21■■□□□ 1.15
RPS28-202ENST00000449223 ZBTB48P10074 688 aaPredicted RBP22.21■■□□□ 1.15
RPS28-202ENST00000449223 U2AF2P26368 475 aaKnown RBP eCLIP22.21■■□□□ 1.15
RPS28-202ENST00000449223 KIF23Q02241 960 aaPredicted RBP22.21■■□□□ 1.15
RPS28-202ENST00000449223 RESTQ13127 1097 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 TYW1BQ6NUM6 668 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 CATSPERGQ6ZRH7 1159 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 GPKOWQ92917 476 aaPredicted RBP eCLIP22.21■■□□□ 1.15
RPS28-202ENST00000449223 FBXO28Q9NVF7 368 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 ATP6V1DQ9Y5K8 247 aa22.21■■□□□ 1.15
RPS28-202ENST00000449223 CALML3P27482 149 aa22.2■■□□□ 1.14
RPS28-202ENST00000449223 HOXA7P31268 230 aaPredicted RBP22.2■■□□□ 1.14
RPS28-202ENST00000449223 GUCY1B3Q02153 619 aa22.2■■□□□ 1.14
RPS28-202ENST00000449223 MOGSQ13724 837 aa22.2■■□□□ 1.14
RPS28-202ENST00000449223 HEATR3Q7Z4Q2 680 aa22.2■■□□□ 1.14
RPS28-202ENST00000449223 DAGLBQ8NCG7 672 aa22.2■■□□□ 1.14
RPS28-202ENST00000449223 PIBF1Q8WXW3 757 aa22.2■■□□□ 1.14
RPS28-202ENST00000449223 WNK4Q96J92 1243 aa22.2■■□□□ 1.14
RPS28-202ENST00000449223 TANGO6Q9C0B7 1094 aa22.2■■□□□ 1.14
RPS28-202ENST00000449223 ZMYND12Q9H0C1 365 aa22.2■■□□□ 1.14
RPS28-202ENST00000449223 FOXP1Q9H334 677 aaPredicted RBP22.2■■□□□ 1.14
RPS28-202ENST00000449223 ADAMTS5Q9UNA0 930 aa22.2■■□□□ 1.14
RPS28-202ENST00000449223 A0A0G2JMZ2 1700 aa22.2■■□□□ 1.14
RPS28-202ENST00000449223 USP17L15C9J2P7 530 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 USP17L13C9JLJ4 530 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 USP17L11C9JVI0 530 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 USP17L18D6R9N7 530 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 USP17L22D6RA61 530 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 USP17L17D6RBQ6 530 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 USP17L19D6RCP7 530 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 USP17L20D6RJB6 530 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 USP17L24Q0WX57 530 aa22.19■■□□□ 1.14
RPS28-202ENST00000449223 FSTL1Q12841 308 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms