RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 ZNF576Q9H609 170 aa21.64■■□□□ 1.05
CHCHD3-203ENST00000448878 MOXD2PA6NHM9 499 aa21.63■■□□□ 1.05
CHCHD3-203ENST00000448878 HMMRO75330 724 aa21.63■■□□□ 1.05
CHCHD3-203ENST00000448878 TIMP1P01033 207 aa21.63■■□□□ 1.05
CHCHD3-203ENST00000448878 CHGBP05060 677 aa21.63■■□□□ 1.05
CHCHD3-203ENST00000448878 C6orf222P0C671 652 aaPredicted RBP21.63■■□□□ 1.05
CHCHD3-203ENST00000448878 CTR9Q6PD62 1173 aa21.63■■□□□ 1.05
CHCHD3-203ENST00000448878 ANKRD33Q7Z3H0 272 aa21.63■■□□□ 1.05
CHCHD3-203ENST00000448878 TIFAQ96CG3 184 aa21.63■■□□□ 1.05
CHCHD3-203ENST00000448878 GLT1D1Q96MS3 346 aa21.63■■□□□ 1.05
CHCHD3-203ENST00000448878 SLF1Q9BQI6 1058 aa21.63■■□□□ 1.05
CHCHD3-203ENST00000448878 PARP14Q460N5 1801 aa21.63■■□□□ 1.05
CHCHD3-203ENST00000448878 REPS2Q8NFH8 660 aa21.62■■□□□ 1.05
CHCHD3-203ENST00000448878 GAS2L1Q99501 681 aaPredicted RBP21.62■■□□□ 1.05
CHCHD3-203ENST00000448878 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.62■■□□□ 1.057e-16■□□□□ 10.3
CHCHD3-203ENST00000448878 TEX13BQ9BXU2 312 aa21.62■■□□□ 1.05
CHCHD3-203ENST00000448878 MKNK2Q9HBH9 465 aa21.62■■□□□ 1.05
CHCHD3-203ENST00000448878 SPC25Q9HBM1 224 aa21.62■■□□□ 1.05
CHCHD3-203ENST00000448878 SNAI1O95863 264 aaPredicted RBP21.61■■□□□ 1.05
CHCHD3-203ENST00000448878 PPIGQ13427 754 aaKnown RBP eCLIP21.61■■□□□ 1.052e-6■□□□□ 10.7
CHCHD3-203ENST00000448878 TJAP1Q5JTD0 557 aa21.61■■□□□ 1.05
CHCHD3-203ENST00000448878 CCDC174Q6PII3 467 aa21.61■■□□□ 1.05
CHCHD3-203ENST00000448878 RPAP2Q8IXW5 612 aaPredicted RBP21.61■■□□□ 1.05
CHCHD3-203ENST00000448878 USP38Q8NB14 1042 aa21.61■■□□□ 1.05
CHCHD3-203ENST00000448878 RIPK3Q9Y572 518 aa21.61■■□□□ 1.05
CHCHD3-203ENST00000448878 PRUNE2Q8WUY3 3088 aa21.61■■□□□ 1.05
CHCHD3-203ENST00000448878 MROH7Q68CQ1 1323 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 SYNGAP1Q96PV0 1343 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 MYADML2A6NDP7 307 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 ZBED4O75132 1171 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 RAB11FIP3O75154 756 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 DUSP11O75319 330 aaKnown RBP21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 ATP5JP18859 108 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 IRX5P78411 483 aaPredicted RBP21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 UBE3CQ15386 1083 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 MFSD5Q6N075 450 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 ZSCAN25Q6NSZ9 544 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 ANKRD35Q8N283 1001 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 MSL3Q8N5Y2 521 aaKnown RBP21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 PRPF38AQ8NAV1 312 aaKnown RBP21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 PCSK9Q8NBP7 692 aaKnown RBP21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 KLHDC9Q8NEP7 349 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 PPP1R12CQ9BZL4 782 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 ROBO3Q96MS0 1386 aa21.6■■□□□ 1.05
CHCHD3-203ENST00000448878 GRXCR1A8MXD5 290 aa21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 MINDY4BA8MYZ0 360 aa21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 F5H6K3 240 aa21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 ASGR1P07306 291 aa21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 VCANP13611 3396 aa21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 KLRC3Q07444 240 aa21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 ACVR2BQ13705 512 aa21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 GNASQ5JWF2 1037 aa21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 TMEM199Q8N511 208 aa21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 KIFC2Q96AC6 838 aa21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 HAUS7Q99871 368 aa21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 PUS7LQ9H0K6 701 aaKnown RBP21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 RAVER2Q9HCJ3 691 aaKnown RBP21.59■■□□□ 1.05
CHCHD3-203ENST00000448878 ACRP10323 421 aa21.58■■□□□ 1.05
CHCHD3-203ENST00000448878 CSF2RAP15509 400 aa21.58■■□□□ 1.05
CHCHD3-203ENST00000448878 PBX2P40425 430 aa21.58■■□□□ 1.05
CHCHD3-203ENST00000448878 NOL8Q76FK4 1167 aaKnown RBP21.58■■□□□ 1.05
CHCHD3-203ENST00000448878 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.58■■□□□ 1.05
CHCHD3-203ENST00000448878 ARPP21Q9UBL0 812 aaPredicted RBP21.58■■□□□ 1.05
CHCHD3-203ENST00000448878 CLIP2Q9UDT6 1046 aa21.58■■□□□ 1.05
CHCHD3-203ENST00000448878 ISY1Q9ULR0 285 aaKnown RBP21.58■■□□□ 1.05
CHCHD3-203ENST00000448878 ELP1O95163 1332 aa21.57■■□□□ 1.04
CHCHD3-203ENST00000448878 TNFRSF10AO00220 468 aa21.57■■□□□ 1.04
CHCHD3-203ENST00000448878 TLR3O15455 904 aaKnown RBP21.57■■□□□ 1.04
CHCHD3-203ENST00000448878 MS4A1P11836 297 aa21.57■■□□□ 1.04
CHCHD3-203ENST00000448878 CCDC144BQ3MJ40 725 aa21.57■■□□□ 1.04
CHCHD3-203ENST00000448878 TMEM240Q5SV17 173 aa21.57■■□□□ 1.04
CHCHD3-203ENST00000448878 MAMDC4Q6UXC1 1216 aa21.57■■□□□ 1.04
CHCHD3-203ENST00000448878 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.57■■□□□ 1.04
CHCHD3-203ENST00000448878 ABHD16BQ9H3Z7 469 aa21.57■■□□□ 1.04
CHCHD3-203ENST00000448878 PRDM12Q9H4Q4 367 aa21.57■■□□□ 1.04
CHCHD3-203ENST00000448878 TBX21Q9UL17 535 aa21.57■■□□□ 1.04
CHCHD3-203ENST00000448878 ZBED9Q6R2W3 1325 aa21.56■■□□□ 1.04
CHCHD3-203ENST00000448878 A0A0U1RQG5 324 aaPredicted RBP21.56■■□□□ 1.04
CHCHD3-203ENST00000448878 ARVCFO00192 962 aa21.56■■□□□ 1.04
CHCHD3-203ENST00000448878 NDUFB10O96000 172 aa21.56■■□□□ 1.04
CHCHD3-203ENST00000448878 CCDC85BQ15834 202 aaPredicted RBP21.56■■□□□ 1.04
CHCHD3-203ENST00000448878 CCSAPQ6IQ19 270 aaPredicted RBP21.56■■□□□ 1.04
CHCHD3-203ENST00000448878 ZNF365Q70YC5 407 aa21.56■■□□□ 1.04
CHCHD3-203ENST00000448878 PBX4Q9BYU1 374 aa21.56■■□□□ 1.04
CHCHD3-203ENST00000448878 NYAP2Q9P242 653 aa21.56■■□□□ 1.04
CHCHD3-203ENST00000448878 COG6Q9Y2V7 657 aa21.56■■□□□ 1.04
CHCHD3-203ENST00000448878 DNAJC25-GNG10A0A024R161 153 aa21.55■■□□□ 1.04
CHCHD3-203ENST00000448878 RASA1P20936 1047 aa21.55■■□□□ 1.04
CHCHD3-203ENST00000448878 IGFBP4P22692 258 aa21.55■■□□□ 1.04
CHCHD3-203ENST00000448878 CDK7P50613 346 aa21.55■■□□□ 1.04
CHCHD3-203ENST00000448878 C16orf59Q7L2K0 433 aa21.55■■□□□ 1.04
CHCHD3-203ENST00000448878 SIRT2Q8IXJ6 389 aa21.55■■□□□ 1.04
CHCHD3-203ENST00000448878 ZNF444Q8N0Y2 327 aaPredicted RBP21.55■■□□□ 1.04
CHCHD3-203ENST00000448878 HOMER2Q9NSB8 354 aa21.55■■□□□ 1.04
CHCHD3-203ENST00000448878 CDH23Q9H251 3354 aa21.54■■□□□ 1.04
CHCHD3-203ENST00000448878 ADCY6O43306 1168 aa21.54■■□□□ 1.04
CHCHD3-203ENST00000448878 CST5P28325 142 aaPredicted RBP21.54■■□□□ 1.04
CHCHD3-203ENST00000448878 ARMCX2Q7L311 632 aa21.54■■□□□ 1.04
CHCHD3-203ENST00000448878 ZNF467Q7Z7K2 595 aaPredicted RBP21.54■■□□□ 1.04
CHCHD3-203ENST00000448878 FBXO40Q9UH90 709 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms