RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 ACBD5Q5T8D3 534 aaPredicted RBP10.16□□□□□ -0.78
SMC6-207ENST00000448223 SNAP23O00161 211 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 SERPINI2O75830 405 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 ZNF202O95125 648 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 SERPINB6P35237 376 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 ST3GAL1Q11201 340 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 GOLPH3LQ9H4A5 285 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 G3BP2Q9UN86 482 aaKnown RBP10.16□□□□□ -0.78
SMC6-207ENST00000448223 FAM169AQ9Y6X4 670 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 RIMS1Q86UR5 1692 aaKnown RBP10.16□□□□□ -0.78
SMC6-207ENST00000448223 ITSN1Q15811 1721 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 USP31Q70CQ4 1352 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 PNMA6AP0CW24 399 aaPredicted RBP10.16□□□□□ -0.78
SMC6-207ENST00000448223 ATP5JP18859 108 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 ERCC5P28715 1186 aaPredicted RBP10.16□□□□□ -0.78
SMC6-207ENST00000448223 PTPN12Q05209 780 aaKnown RBP10.16□□□□□ -0.78
SMC6-207ENST00000448223 PNOCQ13519 176 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 NSUN7Q8NE18 718 aaKnown RBP10.16□□□□□ -0.78
SMC6-207ENST00000448223 FGD4Q96M96 766 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 RILPQ96NA2 401 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 LRRC27Q9C0I9 530 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 BATF3Q9NR55 127 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 JAG2Q9Y219 1238 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 INPP1P49441 399 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 TMED10P49755 219 aaKnown RBP10.16□□□□□ -0.78
SMC6-207ENST00000448223 CLCN6P51797 869 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 ACTN3Q08043 901 aaPredicted RBP10.16□□□□□ -0.78
SMC6-207ENST00000448223 FAM133BQ5BKY9 247 aaKnown RBP10.16□□□□□ -0.78
SMC6-207ENST00000448223 SEL1L2Q5TEA6 688 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 KLHL7Q8IXQ5 586 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 KIAA2013Q8IYS2 634 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 SH2D4AQ9H788 454 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 SLC52A2Q9HAB3 445 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 ADAM21Q9UKJ8 722 aa10.16□□□□□ -0.78
SMC6-207ENST00000448223 TMEM110-MUSTN1A8MSY1 372 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 BMP15O95972 392 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 ATP1A3P13637 1013 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 MCM7P33993 719 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 GUCY2FP51841 1108 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 C16orf87Q6PH81 154 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 SYNE4Q8N205 404 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 FUCA2Q9BTY2 467 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 SPZ1Q9BXG8 430 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 HDAC9Q9UKV0 1011 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 KCNJ14Q9UNX9 436 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 DAAM1Q9Y4D1 1078 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 RANBP6O60518 1105 aaKnown RBP10.15□□□□□ -0.78
SMC6-207ENST00000448223 HOXB7P09629 217 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 SEPT2Q15019 361 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 RGS22Q8NE09 1264 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 NOX5Q96PH1 765 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 PFDN4Q9NQP4 134 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 TCHHQ07283 1943 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 KRT15P19012 456 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 EEF1DP29692 281 aaKnown RBP10.15□□□□□ -0.78
SMC6-207ENST00000448223 LMNB2Q03252 620 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 STOX1Q6ZVD7 989 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 FERMT2Q96AC1 680 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 DRC3Q9H069 523 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 KDRP35968 1356 aa10.15□□□□□ -0.78
SMC6-207ENST00000448223 KRT75O95678 551 aa10.15□□□□□ -0.79
SMC6-207ENST00000448223 PDIA3P30101 505 aaKnown RBP10.15□□□□□ -0.79
SMC6-207ENST00000448223 IL15P40933 162 aaPredicted RBP10.15□□□□□ -0.79
SMC6-207ENST00000448223 NEK2P51955 445 aa10.15□□□□□ -0.79
SMC6-207ENST00000448223 RESTQ13127 1097 aa10.15□□□□□ -0.79
SMC6-207ENST00000448223 XAGE2Q96GT9 111 aa10.15□□□□□ -0.79
SMC6-207ENST00000448223 DESI2Q9BSY9 194 aa10.15□□□□□ -0.79
SMC6-207ENST00000448223 EPC1Q9H2F5 836 aa10.15□□□□□ -0.79
SMC6-207ENST00000448223 UTP6Q9NYH9 597 aaKnown RBP10.15□□□□□ -0.79
SMC6-207ENST00000448223 MAPK8IP1Q9UQF2 711 aa10.15□□□□□ -0.79
SMC6-207ENST00000448223 CCDC151A5D8V7 595 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 ARHGEF9O43307 516 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 SYF2O95926 243 aaKnown RBP10.14□□□□□ -0.79
SMC6-207ENST00000448223 CCDC159P0C7I6 412 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 PHBP35232 272 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 NCBP1Q09161 790 aaKnown RBP10.14□□□□□ -0.79
SMC6-207ENST00000448223 LONRF3Q496Y0 759 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 CCDC93Q567U6 631 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 KCTD16Q68DU8 428 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 ST7Q9NRC1 585 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 TSKSQ9UJT2 592 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 NRKQ7Z2Y5 1582 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 GPAA1O43292 621 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 ZBTB43O43298 467 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 TTF1Q15361 905 aaPredicted RBP10.14□□□□□ -0.79
SMC6-207ENST00000448223 SCYL3Q8IZE3 742 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 ZNF280CQ8ND82 737 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 EEF2KMTQ96G04 330 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 EYA2O00167 538 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 FGAP02671 866 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 KRT10P13645 584 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 PDE6BP35913 854 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 ADKP55263 362 aaKnown RBP10.14□□□□□ -0.79
SMC6-207ENST00000448223 NBPF20Q3BBV1 942 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 FBXO38Q6PIJ6 1188 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 TDRD7Q8NHU6 1098 aaKnown RBP10.14□□□□□ -0.79
SMC6-207ENST00000448223 GFM2Q969S9 779 aaKnown RBP10.14□□□□□ -0.79
SMC6-207ENST00000448223 MRRFQ96E11 262 aaKnown RBP10.14□□□□□ -0.79
SMC6-207ENST00000448223 PRDM1O75626 825 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms