RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 ANAPC4Q9UJX5 808 aa12.96□□□□□ -0.33
NPIPB3-202ENST00000448012 CNPY2Q9Y2B0 182 aa12.96□□□□□ -0.33
NPIPB3-202ENST00000448012 DIS3Q9Y2L1 958 aaKnown RBP12.96□□□□□ -0.33
NPIPB3-202ENST00000448012 MYH8P13535 1937 aa12.96□□□□□ -0.34
NPIPB3-202ENST00000448012 A0A0D9SFI3 127 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 TMEM232C9JQI7 657 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 SEPT4O43236 478 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 PCP11498 1178 aaKnown RBP12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 CYBAP13498 195 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 OAZ1P54368 228 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 CCDC96Q2M329 555 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 LHX8Q68G74 356 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 MFSD6Q6ZSS7 791 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 ANKRD35Q8N283 1001 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 CHST13Q8NET6 341 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 MAML3Q96JK9 1138 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 PRKAG2Q9UGJ0 569 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 ZNF214Q9UL59 606 aaPredicted RBP12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 MTMR7Q9Y216 660 aa12.95□□□□□ -0.34
NPIPB3-202ENST00000448012 DNM1LO00429 736 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 ATP2A1O14983 1001 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 ORC4O43929 436 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 IGHDP01880 384 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 FGAP02671 866 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 PGK2P07205 417 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 HSPD1P10809 573 aaKnown RBP12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 RARBP10826 455 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 SDSP20132 328 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 MCCP23508 829 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 VPS53Q5VIR6 699 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 PLEKHM2Q8IWE5 1019 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 MSL3Q8N5Y2 521 aaKnown RBP12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 STAG1Q8WVM7 1258 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 GMCL1Q96IK5 515 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 TINF2Q9BSI4 451 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 SENP6Q9GZR1 1112 aaPredicted RBP12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 OSBPL3Q9H4L5 887 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 SLC38A10Q9HBR0 1119 aa12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 RAVER2Q9HCJ3 691 aaKnown RBP12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 TNRC18O15417 2968 aaPredicted RBP12.94□□□□□ -0.34
NPIPB3-202ENST00000448012 ZMYM6O95789 1325 aa12.93□□□□□ -0.34
NPIPB3-202ENST00000448012 ZNF213O14771 459 aa12.93□□□□□ -0.34
NPIPB3-202ENST00000448012 TOP1P11387 765 aaKnown RBP12.93□□□□□ -0.34
NPIPB3-202ENST00000448012 NT5C2P49902 561 aa12.93□□□□□ -0.34
NPIPB3-202ENST00000448012 RCSD1Q6JBY9 416 aa12.93□□□□□ -0.34
NPIPB3-202ENST00000448012 CWC27Q6UX04 472 aaKnown RBP12.93□□□□□ -0.34
NPIPB3-202ENST00000448012 REPS2Q8NFH8 660 aa12.93□□□□□ -0.34
NPIPB3-202ENST00000448012 ESR2Q92731 530 aa12.93□□□□□ -0.34
NPIPB3-202ENST00000448012 CTNNA3Q9UI47 895 aa12.93□□□□□ -0.34
NPIPB3-202ENST00000448012 DOCK3Q8IZD9 2030 aa12.93□□□□□ -0.34
NPIPB3-202ENST00000448012 A0A1W2PPC1 479 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 HAND2P61296 217 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 ZNF792Q3KQV3 632 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 TKFCQ3LXA3 575 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 CCDC178Q5BJE1 867 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 PRAMEF19Q5SWL8 479 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 AKNAD1Q5T1N1 836 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 RNF180Q86T96 592 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 DCAF4Q8WV16 495 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 CHMP4CQ96CF2 233 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 LBHD1Q9BQE6 289 aaPredicted RBP12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 ACAD9Q9H845 621 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 HOMER2Q9NSB8 354 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 RBM27Q9P2N5 1060 aaKnown RBP12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 ZMYND8Q9ULU4 1186 aaPredicted RBP12.92□□□□□ -0.34
NPIPB3-202ENST00000448012 PLXNB2O15031 1838 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 PLA2G6O60733 806 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 COL6A1P12109 1028 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 AKR1A1P14550 325 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 ATN1P54259 1190 aaPredicted RBP12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 IMMTQ16891 758 aaKnown RBP12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 GJC2Q5T442 439 aaPredicted RBP12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 ANO1Q5XXA6 986 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 KCTD1Q719H9 257 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 ZNF589Q86UQ0 364 aaPredicted RBP12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 IQCA1Q86XH1 822 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 TRPV1Q8NER1 839 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 XPNPEP3Q9NQH7 507 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 PCDH10Q9P2E7 1040 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 FAM184BQ9ULE4 1060 aa12.91□□□□□ -0.34
NPIPB3-202ENST00000448012 PFASO15067 1338 aa12.9□□□□□ -0.34
NPIPB3-202ENST00000448012 ZNF236Q9UL36 1845 aa12.9□□□□□ -0.34
NPIPB3-202ENST00000448012 FOXP2O15409 715 aa12.9□□□□□ -0.34
NPIPB3-202ENST00000448012 NMT2O60551 498 aa12.9□□□□□ -0.34
NPIPB3-202ENST00000448012 FGRP09769 529 aa12.9□□□□□ -0.34
NPIPB3-202ENST00000448012 ALAS1P13196 640 aa12.9□□□□□ -0.34
NPIPB3-202ENST00000448012 SYN1P17600 705 aa12.9□□□□□ -0.34
NPIPB3-202ENST00000448012 CCDC174Q6PII3 467 aa12.9□□□□□ -0.34
NPIPB3-202ENST00000448012 ZNF467Q7Z7K2 595 aaPredicted RBP12.9□□□□□ -0.34
NPIPB3-202ENST00000448012 TTC14Q96N46 770 aa12.9□□□□□ -0.34
NPIPB3-202ENST00000448012 INCENPQ9NQS7 918 aa12.9□□□□□ -0.34
NPIPB3-202ENST00000448012 IL17RBQ9NRM6 502 aa12.9□□□□□ -0.34
NPIPB3-202ENST00000448012 RNF146Q9NTX7 359 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms