RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 TM6SF1Q9BZW5 370 aa4.84□□□□□ -1.63
PTPN12-208ENST00000447995 LSG1Q9H089 658 aaKnown RBP4.84□□□□□ -1.63
PTPN12-208ENST00000447995 GRPEL1Q9HAV7 217 aa4.84□□□□□ -1.63
PTPN12-208ENST00000447995 COPRSQ9NQ92 184 aa4.84□□□□□ -1.63
PTPN12-208ENST00000447995 PRDM11Q9NQV5 511 aa4.84□□□□□ -1.63
PTPN12-208ENST00000447995 SEC31BQ9NQW1 1179 aa4.84□□□□□ -1.63
PTPN12-208ENST00000447995 TMEM63CQ9P1W3 806 aa4.84□□□□□ -1.63
PTPN12-208ENST00000447995 KANSL3Q9P2N6 904 aa4.84□□□□□ -1.63
PTPN12-208ENST00000447995 LIMCH1Q9UPQ0 1083 aa4.84□□□□□ -1.63
PTPN12-208ENST00000447995 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.84□□□□□ -1.63
PTPN12-208ENST00000447995 ATP6V1DQ9Y5K8 247 aa4.84□□□□□ -1.63
PTPN12-208ENST00000447995 ZBTB39O15060 712 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 CYP27B1O15528 508 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 BRD1O95696 1058 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 IGKV5-2P06315 115 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 XRCC6P12956 609 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTPN12-208ENST00000447995 MYL6BP14649 208 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 YBX3P16989 372 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTPN12-208ENST00000447995 PSMA5P28066 241 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 KCNJ4P48050 445 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 PIP4K2BP78356 416 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 SLC39A6Q13433 755 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 CHRNA2Q15822 529 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 RABL6Q3YEC7 729 aaPredicted RBP4.83□□□□□ -1.64
PTPN12-208ENST00000447995 ANKRD34AQ69YU3 496 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 CWC27Q6UX04 472 aaKnown RBP4.83□□□□□ -1.64
PTPN12-208ENST00000447995 TOM1L2Q6ZVM7 507 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 BRINP3Q76B58 766 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 CLEC10AQ8IUN9 316 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 ZGPATQ8N5A5 531 aaKnown RBP4.83□□□□□ -1.64
PTPN12-208ENST00000447995 ZCRB1Q8TBF4 217 aaKnown RBP4.83□□□□□ -1.64
PTPN12-208ENST00000447995 KCNB2Q92953 911 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 WNT8BQ93098 351 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 POP1Q99575 1024 aaKnown RBP4.83□□□□□ -1.64
PTPN12-208ENST00000447995 TEX13AQ9BXU3 409 aaPredicted RBP4.83□□□□□ -1.64
PTPN12-208ENST00000447995 BICC1Q9H694 974 aaKnown RBP4.83□□□□□ -1.64
PTPN12-208ENST00000447995 HMG20BQ9P0W2 317 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 SLAIN2Q9P270 581 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 PALD1Q9ULE6 856 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 FNDC3AQ9Y2H6 1198 aaKnown RBP4.83□□□□□ -1.64
PTPN12-208ENST00000447995 HIF3AQ9Y2N7 669 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 RNF114Q9Y508 228 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 SNX14Q9Y5W7 946 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 CYP46A1Q9Y6A2 500 aa4.83□□□□□ -1.64
PTPN12-208ENST00000447995 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.83□□□□□ -1.64
PTPN12-208ENST00000447995 CCDC171Q6TFL3 1326 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 PRAMEF22A3QJZ6 481 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 SASH1O94885 1247 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 MAP4K4O95819 1239 aaPredicted RBP4.82□□□□□ -1.64
PTPN12-208ENST00000447995 BMP3P12645 472 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 IL2RBP14784 551 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 ATP5JP18859 108 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 HOXA10P31260 410 aaPredicted RBP4.82□□□□□ -1.64
PTPN12-208ENST00000447995 ZNF445P59923 1031 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 CCDC173Q0VFZ6 552 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 KRT32Q14532 448 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 NAA30Q147X3 362 aaPredicted RBP4.82□□□□□ -1.64
PTPN12-208ENST00000447995 ANKRD1Q15327 319 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 LRRFIP1Q32MZ4 808 aaKnown RBP4.82□□□□□ -1.64
PTPN12-208ENST00000447995 VPS53Q5VIR6 699 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 BEND4Q6ZU67 534 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 NCAPG2Q86XI2 1143 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 TRIM44Q96DX7 344 aaPredicted RBP4.82□□□□□ -1.64
PTPN12-208ENST00000447995 KAZALD1Q96I82 304 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 FSD1Q9BTV5 496 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 UPF3BQ9BZI7 483 aaKnown RBP4.82□□□□□ -1.64
PTPN12-208ENST00000447995 RNF208Q9H0X6 261 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 OSGEPQ9NPF4 335 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 LMBRD1Q9NUN5 540 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 CWC25Q9NXE8 425 aaPredicted RBP4.82□□□□□ -1.64
PTPN12-208ENST00000447995 STIM2Q9P246 746 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 ADGRE2Q9UHX3 823 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 SERPINA10Q9UK55 444 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 PA2G4Q9UQ80 394 aaKnown RBP4.82□□□□□ -1.64
PTPN12-208ENST00000447995 SMC3Q9UQE7 1217 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 LAMB4A4D0S4 1761 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 RGPD5Q99666 1765 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 C5P01031 1676 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 AK9Q5TCS8 1911 aa4.82□□□□□ -1.64
PTPN12-208ENST00000447995 COL5A2P05997 1499 aaPredicted RBP4.81□□□□□ -1.64
PTPN12-208ENST00000447995 STRCP1A6NGW2 1772 aa4.81□□□□□ -1.64
PTPN12-208ENST00000447995 A0A087WZG4 1122 aa4.81□□□□□ -1.64
PTPN12-208ENST00000447995 CARNS1A5YM72 827 aa4.81□□□□□ -1.64
PTPN12-208ENST00000447995 NFKBIEO00221 500 aa4.81□□□□□ -1.64
PTPN12-208ENST00000447995 PRPF40AO75400 957 aaKnown RBP4.81□□□□□ -1.64
PTPN12-208ENST00000447995 LETM1O95202 739 aaPredicted RBP4.81□□□□□ -1.64
PTPN12-208ENST00000447995 CASTP20810 708 aaKnown RBP4.81□□□□□ -1.64
PTPN12-208ENST00000447995 PDCP20941 246 aa4.81□□□□□ -1.64
PTPN12-208ENST00000447995 NASPP49321 788 aaPredicted RBP4.81□□□□□ -1.64
PTPN12-208ENST00000447995 EVA1CP58658 441 aa4.81□□□□□ -1.64
PTPN12-208ENST00000447995 NLRP12P59046 1061 aa4.81□□□□□ -1.64
PTPN12-208ENST00000447995 ZSCAN23Q3MJ62 389 aa4.81□□□□□ -1.64
PTPN12-208ENST00000447995 TNNI3KQ59H18 835 aa4.81□□□□□ -1.64
PTPN12-208ENST00000447995 TMEM164Q5U3C3 297 aa4.81□□□□□ -1.64
PTPN12-208ENST00000447995 PDE12Q6L8Q7 609 aaKnown RBP4.81□□□□□ -1.64
PTPN12-208ENST00000447995 PRPF40BQ6NWY9 871 aaKnown RBP4.81□□□□□ -1.64
PTPN12-208ENST00000447995 CAVIN1Q6NZI2 390 aaKnown RBP4.81□□□□□ -1.64
PTPN12-208ENST00000447995 NOL8Q76FK4 1167 aaKnown RBP4.81□□□□□ -1.64
PTPN12-208ENST00000447995 UBE3BQ7Z3V4 1068 aa4.81□□□□□ -1.64
PTPN12-208ENST00000447995 LRP10Q7Z4F1 713 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms