RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 PRAMEF1O95521 474 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 SRFP11831 508 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 PPP2R2AP63151 447 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 GRB10Q13322 594 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 CLEC16AQ2KHT3 1053 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 PLEKHG4Q58EX7 1191 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 SYNPOQ8N3V7 929 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 DAGLBQ8NCG7 672 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 TRIT1Q9H3H1 467 aaKnown RBP6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 NOL6Q9H6R4 1146 aaKnown RBP6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 GPATCH2Q9NW75 528 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 TRAV20A0A0B4J274 112 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 CCDC163A0A0D9SF12 145 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 RBAK-RBAKDNI3L0D1 243 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 CAPNS1P04632 268 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 GSNP06396 782 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 ITIH2P19823 946 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 CLCN7P51798 805 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 PPP2R5DQ14738 602 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 NKPD1Q17RQ9 610 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 C16orf86Q6ZW13 317 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 ZDHHC13Q8IUH4 622 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 FAM181AQ8N9Y4 354 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 LGR4Q9BXB1 951 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 HDAC8Q9BY41 377 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 DUSP15Q9H1R2 295 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 LRRC4CQ9HCJ2 640 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 ST14Q9Y5Y6 855 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 SHISA3A0PJX4 238 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 CYP26A1O43174 497 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 DYRK3O43781 588 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 KCNH1O95259 989 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 CEACAM5P06731 702 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 FGFR1P11362 822 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 CWF19L1Q69YN2 538 aaKnown RBP6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 SCUBE1Q8IWY4 988 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 SPACA3Q8IXA5 215 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 ZNF655Q8N720 491 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 ZDHHC15Q96MV8 337 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 IPO9Q96P70 1041 aaKnown RBP6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 CDC6Q99741 560 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 PIM2Q9P1W9 311 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 SNX11Q9Y5W9 270 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 U3KQE9 123 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 SBNO2Q9Y2G9 1366 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 H0Y8X5 98 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 TBX1O43435 398 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 IGHA1P01876 353 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 AMPD2Q01433 879 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 IFI16Q16666 785 aaKnown RBP6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 CDKAL1Q5VV42 579 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 FOXB2Q5VYV0 432 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 GTF2IRD2BQ6EKJ0 949 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 THAP5Q7Z6K1 395 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 KIAA0907Q7Z7F0 614 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 GTF2IRD2Q86UP8 949 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 TSPYL5Q86VY4 417 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 NETO1Q8TDF5 533 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 KISS1RQ969F8 398 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 CCDC140Q96MF4 163 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 DHRS4Q9BTZ2 278 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 SLKQ9H2G2 1235 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 NKX2-4Q9H2Z4 354 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 MINPP1Q9UNW1 487 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 PLAGL2Q9UPG8 496 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 MYO15BQ96JP2 1530 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 TMEM265A0A087WTH1 108 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 TRBV23-1A0A0A0MS06 115 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 MEIS1O00470 390 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 ASMTLO95671 621 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 PABPC1P11940 636 aaKnown RBP6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 FOSL1P15407 271 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 HOXC12P31275 282 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 CTSKP43235 329 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 POU4F1Q01851 419 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 TCEA2Q15560 299 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 TAF7LQ5H9L4 462 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 FAM209AQ5JX71 171 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 ZNF662Q6ZS27 426 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 BTN2A2Q8WVV5 523 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 TCTN2Q96GX1 697 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 EXOC2Q96KP1 924 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 HSPA12BQ96MM6 686 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 FEZ1Q99689 392 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 CYP26B1Q9NR63 512 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 DNAJC25-GNG10A0A024R161 153 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 ANKRD62A6NC57 917 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 PRR19A6NJB7 356 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 PRODHO43272 600 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 TPP2P29144 1249 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 L1CAMP32004 1257 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 BMP8BP34820 402 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 GRIA2P42262 883 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 NOP2P46087 812 aaKnown RBP6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 YOD1Q5VVQ6 348 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 CRTC3Q6UUV7 619 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 NSMFQ6X4W1 530 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 PLD6Q8N2A8 252 aaKnown RBP6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 OSBP2Q969R2 916 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms