RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 IKQ13123 557 aaPredicted RBP9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 PAF1Q8N7H5 531 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 GALNT6Q8NCL4 622 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 BRSK1Q8TDC3 778 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 PSKH2Q96QS6 385 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 FNBP1Q96RU3 617 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 SRPK1Q96SB4 655 aaKnown RBP9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 FAM167BQ9BTA0 163 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 NSRP1Q9H0G5 558 aaKnown RBP9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 HOOK1Q9UJC3 728 aaKnown RBP9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 MTUS1Q9ULD2 1270 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 GAKO14976 1311 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 CFAP43Q8NDM7 1665 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 KIF15Q9NS87 1388 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 HECW1Q76N89 1606 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 CARNS1A5YM72 827 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 ATP5JP18859 108 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 S100A1P23297 94 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 WEE1P30291 646 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 BASP1P80723 227 aaKnown RBP9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 DR1Q01658 176 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 GPR162Q16538 588 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 WHAMMP3Q1A5X7 153 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 EXOC3L1Q86VI1 746 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 CHPFQ8IZ52 775 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 PPP1R14CQ8TAE6 165 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 RPGRIP1Q96KN7 1286 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 SPATA17Q96L03 361 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 ARFGAP3Q9NP61 516 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 ANO10Q9NW15 660 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 MAP3K4Q9Y6R4 1608 aa9.6□□□□□ -0.87
MCF2L2-203ENST00000447025 ARHGAP25P42331 645 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 NMIQ13287 307 aaPredicted RBP9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 SAFB2Q14151 953 aaKnown RBP eCLIP9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 WASHC4Q2M389 1173 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 ZNF746Q6NUN9 644 aaPredicted RBP9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 ARHGEF18Q6ZSZ5 1173 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 PROSER2Q86WR7 435 aaPredicted RBP9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 FAM20CQ8IXL6 584 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 CCDC155Q8N6L0 562 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 DPF3Q92784 378 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 EBF2Q9HAK2 575 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 NDFIP2Q9NV92 336 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 STIM2Q9P246 746 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 ZNF644Q9H582 1327 aaPredicted RBP9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 PPIP5K1Q6PFW1 1433 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 PTPRMP28827 1452 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 TSPOAP1O95153 1857 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 GPR75-ASB3A0A0A6YYF3 556 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 BIN1O00499 593 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 SEC31AO94979 1220 aaKnown RBP9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 NPTXRO95502 500 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 KRT14P02533 472 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 GZMAP12544 262 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 ALDH3A1P30838 453 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 CD97P48960 835 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 HSD17B7P56937 341 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 MKRN4PQ13434 485 aaPredicted RBP9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 ZNF362Q5T0B9 420 aaPredicted RBP9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 NLGN1Q8N2Q7 840 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 CNNM3Q8NE01 707 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 RASSF8Q8NHQ8 419 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 DYDC1Q8WWB3 177 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 SDCCAG3Q96C92 435 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 INIPQ9NRY2 104 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 RIMKLBQ9ULI2 386 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 ASB3Q9Y575 518 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 GPRASP1Q5JY77 1395 aa9.59□□□□□ -0.87
MCF2L2-203ENST00000447025 TLDC2A0PJX2 215 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 PLIN1O60240 522 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 NMT2O60551 498 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 CYP2E1P05181 493 aaPredicted RBP9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 HSPA4P34932 840 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 B2MP61769 119 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 TUBA4AP68366 448 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 IFFO1Q0D2I5 559 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 APOBRQ0VD83 1088 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 UBE4AQ14139 1066 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 FCHSD1Q86WN1 690 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 GOLM1Q8NBJ4 401 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 HNRNPABQ99729 332 aaKnown RBP9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 RTFDC1Q9BY42 306 aaPredicted RBP9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 SETD5Q9C0A6 1442 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 MRGBPQ9NV56 204 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 ZFATQ9P243 1243 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 IVNS1ABPQ9Y6Y0 642 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 CCDC162PA2VCL2 907 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 RASSF10A6NK89 507 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 BIRC5O15392 142 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 PRC1O43663 620 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 PFDN1O60925 122 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 FOSP01100 380 aaPredicted RBP9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 ALDH2P05091 517 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 CTCFP49711 727 aaPredicted RBP9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 SULT2A1Q06520 285 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 SP140Q13342 867 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 STIM1Q13586 685 aa9.58□□□□□ -0.88
MCF2L2-203ENST00000447025 CCDC40Q4G0X9 1142 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms