RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 SLC44A5Q8NCS7 719 aa8.78□□□□□ -1
HDAC9-216ENST00000446646 WDR18Q9BV38 432 aa8.78□□□□□ -1
HDAC9-216ENST00000446646 OSBPL5Q9H0X9 879 aaPredicted RBP8.78□□□□□ -1
HDAC9-216ENST00000446646 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.78□□□□□ -1
HDAC9-216ENST00000446646 TBX21Q9UL17 535 aa8.78□□□□□ -1
HDAC9-216ENST00000446646 LRRC37A2A6NM11 1700 aa8.77□□□□□ -1
HDAC9-216ENST00000446646 SEPT4O43236 478 aa8.77□□□□□ -1.01
HDAC9-216ENST00000446646 GDF11O95390 407 aa8.77□□□□□ -1.01
HDAC9-216ENST00000446646 TIMP1P01033 207 aa8.77□□□□□ -1.01
HDAC9-216ENST00000446646 TAL1P17542 331 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-216ENST00000446646 ADORA1P30542 326 aa8.77□□□□□ -1.01
HDAC9-216ENST00000446646 GGCXP38435 758 aa8.77□□□□□ -1.01
HDAC9-216ENST00000446646 SPRED2Q7Z698 418 aa8.77□□□□□ -1.01
HDAC9-216ENST00000446646 UIMC1Q96RL1 719 aa8.77□□□□□ -1.01
HDAC9-216ENST00000446646 CERS4Q9HA82 394 aa8.77□□□□□ -1.01
HDAC9-216ENST00000446646 CWC22Q9HCG8 908 aaKnown RBP8.77□□□□□ -1.01
HDAC9-216ENST00000446646 TMOD4Q9NZQ9 345 aa8.77□□□□□ -1.01
HDAC9-216ENST00000446646 MTCH2Q9Y6C9 303 aa8.77□□□□□ -1.01
HDAC9-216ENST00000446646 TPRP12270 2363 aaKnown RBP8.77□□□□□ -1.01
HDAC9-216ENST00000446646 KIF16BQ96L93 1317 aa8.77□□□□□ -1.01
HDAC9-216ENST00000446646 SMCHD1A6NHR9 2005 aa8.76□□□□□ -1.01
HDAC9-216ENST00000446646 CHD8Q9HCK8 2581 aa8.76□□□□□ -1.01
HDAC9-216ENST00000446646 PRR33A8MZF0 331 aa8.76□□□□□ -1.01
HDAC9-216ENST00000446646 IFIT1P09914 478 aaKnown RBP8.76□□□□□ -1.01
HDAC9-216ENST00000446646 ADORA2AP29274 412 aa8.76□□□□□ -1.01
HDAC9-216ENST00000446646 CALD1Q05682 793 aaKnown RBP8.76□□□□□ -1.01
HDAC9-216ENST00000446646 ZYXQ15942 572 aaKnown RBP8.76□□□□□ -1.01
HDAC9-216ENST00000446646 RABL6Q3YEC7 729 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-216ENST00000446646 VWCEQ96DN2 955 aa8.76□□□□□ -1.01
HDAC9-216ENST00000446646 REPIN1Q9BWE0 567 aaKnown RBP8.76□□□□□ -1.01
HDAC9-216ENST00000446646 C9orf78Q9NZ63 289 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-216ENST00000446646 RABGAP1Q9Y3P9 1069 aa8.76□□□□□ -1.01
HDAC9-216ENST00000446646 SALL1Q9NSC2 1324 aa8.76□□□□□ -1.01
HDAC9-216ENST00000446646 GVINP1Q7Z2Y8 2422 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 ATAD5Q96QE3 1844 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 MYADML2A6NDP7 307 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 NR1I2O75469 434 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 RFX5P48382 616 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-216ENST00000446646 OLFML2BQ68BL8 750 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 DIEXFQ68CQ4 756 aaKnown RBP8.75□□□□□ -1.01
HDAC9-216ENST00000446646 MFSD5Q6N075 450 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 ATG9AQ7Z3C6 839 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 ANKRD33Q7Z3H0 272 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 HERVK_113Q902F9 699 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 DDRGK1Q96HY6 314 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 PPP1R12CQ9BZL4 782 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 PRKD2Q9BZL6 878 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 SLC28A3Q9HAS3 691 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 MSRAQ9UJ68 235 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 MYH2Q9UKX2 1941 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 MROH7-TTC4A0A0A0MT08 1334 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 UMODL1Q5DID0 1318 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 SIPA1L1O43166 1804 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 DMXL1Q9Y485 3027 aa8.75□□□□□ -1.01
HDAC9-216ENST00000446646 GBF1Q92538 1859 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 GPR75-ASB3A0A0A6YYF3 556 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 USP17L10C9JJH3 530 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 VAMP4O75379 141 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 SLC5A1P13866 664 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 CYP2C18P33260 490 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 MECOMQ03112 1051 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 RASGRF1Q13972 1273 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 RAB30Q15771 203 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 AAK1Q2M2I8 961 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 PUS10Q3MIT2 529 aaKnown RBP8.74□□□□□ -1.01
HDAC9-216ENST00000446646 PPP2R2DQ66LE6 453 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 SLC4A10Q6U841 1118 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 DZIP1Q86YF9 867 aaKnown RBP8.74□□□□□ -1.01
HDAC9-216ENST00000446646 LPIN2Q92539 896 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 AS3MTQ9HBK9 375 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 XPNPEP3Q9NQH7 507 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 ZBTB21Q9ULJ3 1066 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 MYH13Q9UKX3 1938 aa8.74□□□□□ -1.01
HDAC9-216ENST00000446646 ADAMTS4O75173 837 aa8.73□□□□□ -1.01
HDAC9-216ENST00000446646 MS4A1P11836 297 aa8.73□□□□□ -1.01
HDAC9-216ENST00000446646 PPIGQ13427 754 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDAC9-216ENST00000446646 PI16Q6UXB8 463 aa8.73□□□□□ -1.01
HDAC9-216ENST00000446646 OTOP2Q7RTS6 562 aa8.73□□□□□ -1.01
HDAC9-216ENST00000446646 DPP9Q86TI2 863 aa8.73□□□□□ -1.01
HDAC9-216ENST00000446646 ACER1Q8TDN7 264 aa8.73□□□□□ -1.01
HDAC9-216ENST00000446646 SH3RF3Q8TEJ3 882 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-216ENST00000446646 MOV10L1Q9BXT6 1211 aaKnown RBP8.73□□□□□ -1.01
HDAC9-216ENST00000446646 TBC1D2Q9BYX2 928 aa8.73□□□□□ -1.01
HDAC9-216ENST00000446646 ABCF2Q9UG63 623 aa8.73□□□□□ -1.01
HDAC9-216ENST00000446646 CHD6Q8TD26 2715 aa8.73□□□□□ -1.01
HDAC9-216ENST00000446646 FAM186AA6NE01 2351 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 C19orf81C9J6K1 198 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 CCER2I3L3R5 266 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 EYA2O00167 538 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 GLRX3O76003 335 aaKnown RBP8.72□□□□□ -1.01
HDAC9-216ENST00000446646 VCAM1P19320 739 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 CLCN1P35523 988 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 ACLYP53396 1101 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 CCSAPQ6IQ19 270 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-216ENST00000446646 USP17L2Q6R6M4 530 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 CATSPERGQ6ZRH7 1159 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 TBC1D9Q6ZT07 1266 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 HLA-CQ95604 372 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 TOX2Q96NM4 488 aa8.72□□□□□ -1.01
HDAC9-216ENST00000446646 CHMP4AQ9BY43 222 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms