RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 ERCC5P28715 1186 aaPredicted RBP13.44□□□□□ -0.26
APLF-203ENST00000445692 KIF5BP33176 963 aa13.44□□□□□ -0.26
APLF-203ENST00000445692 SSR1P43307 286 aaKnown RBP13.44□□□□□ -0.26
APLF-203ENST00000445692 TNNI2P48788 182 aa13.44□□□□□ -0.26
APLF-203ENST00000445692 ACTN3Q08043 901 aaPredicted RBP13.44□□□□□ -0.26
APLF-203ENST00000445692 PPFIA1Q13136 1202 aa13.44□□□□□ -0.26
APLF-203ENST00000445692 MSL1Q68DK7 614 aa13.44□□□□□ -0.26
APLF-203ENST00000445692 TADA2BQ86TJ2 420 aa13.44□□□□□ -0.26
APLF-203ENST00000445692 TBC1D31Q96DN5 1066 aa13.44□□□□□ -0.26
APLF-203ENST00000445692 EHD2Q9NZN4 543 aa13.44□□□□□ -0.26
APLF-203ENST00000445692 SAP30BPQ9UHR5 308 aaKnown RBP13.44□□□□□ -0.26
APLF-203ENST00000445692 LRRIQ3A6PVS8 624 aaPredicted RBP13.43□□□□□ -0.26
APLF-203ENST00000445692 CCNT1O60563 726 aaKnown RBP13.43□□□□□ -0.26
APLF-203ENST00000445692 ABL1P00519 1130 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 KRT13P13646 458 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 ADD2P35612 726 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 LRRC41Q15345 812 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 TUBGCP2Q9BSJ2 902 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 EPB41L5Q9HCM4 733 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 TFCP2L1Q9NZI6 479 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 NUTM2BA6NNL0 878 aaPredicted RBP13.43□□□□□ -0.26
APLF-203ENST00000445692 NUTM2EB1AL46 878 aaPredicted RBP13.43□□□□□ -0.26
APLF-203ENST00000445692 EHHADHQ08426 723 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 ARHGEF25Q86VW2 580 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 PANX2Q96RD6 677 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 KRT12Q99456 494 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 CHD2O14647 1828 aaKnown RBP13.43□□□□□ -0.26
APLF-203ENST00000445692 BUB1BO60566 1050 aaPredicted RBP13.43□□□□□ -0.26
APLF-203ENST00000445692 FMNL1O95466 1100 aaPredicted RBP13.43□□□□□ -0.26
APLF-203ENST00000445692 TSPY3P0CV98 308 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 TSPY8P0CW00 308 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 DYNLL1P63167 89 aaKnown RBP13.43□□□□□ -0.26
APLF-203ENST00000445692 NBPF14Q5TI25 921 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 CTNNBL1Q8WYA6 563 aaPredicted RBP13.43□□□□□ -0.26
APLF-203ENST00000445692 DPH5Q9H2P9 285 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 CPVLQ9H3G5 476 aa13.43□□□□□ -0.26
APLF-203ENST00000445692 SOS2Q07890 1332 aaPredicted RBP13.43□□□□□ -0.26
APLF-203ENST00000445692 GOLGA6L10A0A0M3HER8 536 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 RPAINQ86UA6 219 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 KANSL2Q9H9L4 492 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 NIP7Q9Y221 180 aaKnown RBP eCLIP13.42□□□□□ -0.26
APLF-203ENST00000445692 VIMP08670 466 aaKnown RBP13.42□□□□□ -0.26
APLF-203ENST00000445692 AMPD3Q01432 767 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 DCAF17Q5H9S7 520 aaPredicted RBP13.42□□□□□ -0.26
APLF-203ENST00000445692 BEND6Q5SZJ8 279 aaPredicted RBP13.42□□□□□ -0.26
APLF-203ENST00000445692 TRIML1Q8N9V2 468 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 HPS3Q969F9 1004 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 ALDH8A1Q9H2A2 487 aaPredicted RBP13.42□□□□□ -0.26
APLF-203ENST00000445692 SEC31BQ9NQW1 1179 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 TUBE1Q9UJT0 475 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 SRPRBQ9Y5M8 271 aaKnown RBP13.42□□□□□ -0.26
APLF-203ENST00000445692 A0A087WUV0 522 aaPredicted RBP13.42□□□□□ -0.26
APLF-203ENST00000445692 EIF4E1BA6NMX2 242 aaKnown RBP13.42□□□□□ -0.26
APLF-203ENST00000445692 ZRANB2O95218 330 aaKnown RBP eCLIP13.42□□□□□ -0.26
APLF-203ENST00000445692 IFNAR1P17181 557 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 UBE4AQ14139 1066 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 EP400NLQ6ZTU2 488 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 TEX2Q8IWB9 1127 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 CRACR2BQ8N4Y2 399 aaPredicted RBP13.42□□□□□ -0.26
APLF-203ENST00000445692 NFU1Q9UMS0 254 aa13.42□□□□□ -0.26
APLF-203ENST00000445692 TECP42680 631 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 CLNS1AP54105 237 aaKnown RBP13.41□□□□□ -0.26
APLF-203ENST00000445692 TRIM14Q14142 442 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 B4GALNT4Q76KP1 1039 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 TEX13AQ9BXU3 409 aaPredicted RBP13.41□□□□□ -0.26
APLF-203ENST00000445692 PACSIN2Q9UNF0 486 aaPredicted RBP13.41□□□□□ -0.26
APLF-203ENST00000445692 PLEKHG1Q9ULL1 1385 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 EZRP15311 586 aaKnown RBP13.41□□□□□ -0.26
APLF-203ENST00000445692 BRD2P25440 801 aaKnown RBP13.41□□□□□ -0.26
APLF-203ENST00000445692 TUBB4BP68371 445 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 SARNPP82979 210 aaKnown RBP13.41□□□□□ -0.26
APLF-203ENST00000445692 TUBB2AQ13885 445 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 PUM3Q15397 648 aaKnown RBP13.41□□□□□ -0.26
APLF-203ENST00000445692 KRT71Q3SY84 523 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 NFRKBQ6P4R8 1299 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 EFCAB13Q8IY85 973 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 MGARPQ8TDB4 240 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 FERMT2Q96AC1 680 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 CCDC51Q96ER9 411 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 CNOT6LQ96LI5 555 aaKnown RBP13.41□□□□□ -0.26
APLF-203ENST00000445692 TUBB2BQ9BVA1 445 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 ANKIB1Q9P2G1 1089 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 DUSP10Q9Y6W6 482 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 COL15A1P39059 1388 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 NMT2O60551 498 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 CD44P16070 742 aaKnown RBP13.41□□□□□ -0.26
APLF-203ENST00000445692 TMEM266Q2M3C6 531 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 CCDC93Q567U6 631 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 MARCH10Q8NA82 808 aaPredicted RBP13.41□□□□□ -0.26
APLF-203ENST00000445692 GSDMAQ96QA5 445 aa13.41□□□□□ -0.26
APLF-203ENST00000445692 KCNK3O14649 394 aa13.4□□□□□ -0.26
APLF-203ENST00000445692 GYPCP04921 128 aa13.4□□□□□ -0.26
APLF-203ENST00000445692 PEX19P40855 299 aa13.4□□□□□ -0.26
APLF-203ENST00000445692 RFX5P48382 616 aaPredicted RBP13.4□□□□□ -0.26
APLF-203ENST00000445692 CACNB1Q02641 598 aaPredicted RBP13.4□□□□□ -0.26
APLF-203ENST00000445692 NHEJ1Q9H9Q4 299 aaPredicted RBP13.4□□□□□ -0.26
APLF-203ENST00000445692 LY9Q9HBG7 655 aa13.4□□□□□ -0.26
APLF-203ENST00000445692 GSTTP1A0A1W2PQM5 241 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms