RNA–Protein interactions for RNA: ENST00000445481.1

RPL39P40-201, Transcript of ribosomal protein L39 pseudogene 40, humanhuman

BASIC

Gene RPL39P40, Length 146 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P40-201ENST00000445481 THUMPD2Q9BTF0 503 aaKnown RBP3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 KRTAP17-1Q9BYP8 105 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 ACBD3Q9H3P7 528 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 L2HGDHQ9H9P8 463 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 HOMER3Q9NSC5 361 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 CHCHD3Q9NX63 227 aaKnown RBP3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 LCMT1Q9UIC8 334 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 MCM8Q9UJA3 840 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 ZNF215Q9UL58 517 aaPredicted RBP3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 AP4E1Q9UPM8 1137 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 SMC3Q9UQE7 1217 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 RPS6KL1Q9Y6S9 549 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 CFAP43Q8NDM7 1665 aa3.3□□□□□ -1.88
RPL39P40-201ENST00000445481 PLB1Q6P1J6 1458 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 RALGAPBQ86X10 1494 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 KDRP35968 1356 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 IL16Q14005 1332 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 CHUKO15111 745 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 POLR3GO15318 223 aaPredicted RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 PPFIA4O75335 1185 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 ERLIN2O94905 339 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 SNUPNO95149 360 aaKnown RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 POLR3DP05423 398 aaPredicted RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 TUBBP07437 444 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 CT47B1P0C2W7 299 aaPredicted RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 IMPDH2P12268 514 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 RLBP1P12271 317 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 MX1P20591 662 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 FUT4P22083 530 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 MPSTP25325 297 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 OAS2P29728 719 aaKnown RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 ABCD1P33897 745 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 ASPAP45381 313 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 KCNJ6P48051 423 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 LMAN1P49257 510 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 RPS6KA3P51812 740 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 SLC8A3P57103 927 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 TMED1Q13445 227 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 MTMR3Q13615 1198 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 MAP7Q14244 749 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 SMC1AQ14683 1233 aaKnown RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 SLC5A9Q2M3M2 681 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 SPRED3Q2MJR0 410 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 RGL3Q3MIN7 710 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 PREPLQ4J6C6 727 aaPredicted RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 CCDC158Q5M9N0 1113 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 C1QTNF12Q5T7M4 302 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 RCSD1Q6JBY9 416 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 OGFOD3Q6PK18 319 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 SDCCAG8Q86SQ7 713 aaPredicted RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 ATG4DQ86TL0 474 aaPredicted RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 MORC1Q86VD1 984 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 SPATS2Q86XZ4 545 aaKnown RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 KSR1Q8IVT5 923 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 RBM12BQ8IXT5 1001 aaKnown RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 RPUSD2Q8IZ73 545 aaKnown RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 TMTC2Q8N394 836 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 C17orf53Q8N3J3 647 aaPredicted RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 DRAXINQ8NBI3 349 aaPredicted RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 RTF1Q92541 710 aaKnown RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 GTF3C6Q969F1 213 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 CCDC97Q96F63 343 aaPredicted RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 INTS4Q96HW7 963 aaKnown RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 C16orf45Q96MC5 204 aaPredicted RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 KIF2CQ99661 725 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 TRIM56Q9BRZ2 755 aaKnown RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 MMTAG2Q9BU76 263 aaKnown RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 YIPF2Q9BWQ6 316 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 PRDM7Q9NQW5 492 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 BATF3Q9NR55 127 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 ST7Q9NRC1 585 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 ADAM21Q9UKJ8 722 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 POLIQ9UNA4 740 aa3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 ZNF608Q9ULD9 1512 aaPredicted RBP3.29□□□□□ -1.88
RPL39P40-201ENST00000445481 DENND4BO75064 1496 aaPredicted RBP3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 GRIN2AQ12879 1464 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 CASKIN1Q8WXD9 1431 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 SOS1Q07889 1333 aaPredicted RBP3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 A6NNZ2 444 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 EFCAB8A8MWE9 144 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 BIN1O00499 593 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 U2SURPO15042 1029 aaKnown RBP3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 EPB41L2O43491 1005 aaKnown RBP3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 PHACTR2O75167 634 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 CDC45O75419 566 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 CDKL5O76039 1030 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 BRD1O95696 1058 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 CCDC192P0DO97 292 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 MYBL2P10244 700 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 PECAM1P16284 738 aaPredicted RBP3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 CASTP20810 708 aaKnown RBP3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 SCP2P22307 547 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 GPTP24298 496 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 HNRNPH1P31943 449 aaKnown RBP3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 EIF1AXP47813 144 aaKnown RBP3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 GRIA4P48058 902 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 INHBEP58166 350 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 UBE2HP62256 183 aa3.28□□□□□ -1.88
RPL39P40-201ENST00000445481 ST5P78524 1137 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms