RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 JMJD4Q9H9V9 463 aa17.55■□□□□ 0.4
CCNE1-203ENST00000444983 FBXO28Q9NVF7 368 aa17.55■□□□□ 0.4
CCNE1-203ENST00000444983 STK36Q9NRP7 1315 aa17.54■□□□□ 0.4
CCNE1-203ENST00000444983 MYH6P13533 1939 aa17.54■□□□□ 0.4
CCNE1-203ENST00000444983 PPFIA3O75145 1194 aa17.54■□□□□ 0.4
CCNE1-203ENST00000444983 CETPP11597 493 aa17.54■□□□□ 0.4
CCNE1-203ENST00000444983 PKN1Q16512 942 aa17.54■□□□□ 0.4
CCNE1-203ENST00000444983 FAM160B2Q86V87 743 aa17.54■□□□□ 0.4
CCNE1-203ENST00000444983 CHURC1Q8WUH1 139 aa17.54■□□□□ 0.4
CCNE1-203ENST00000444983 PRR12Q9ULL5 1215 aa17.54■□□□□ 0.4
CCNE1-203ENST00000444983 ADAMTS5Q9UNA0 930 aa17.54■□□□□ 0.4
CCNE1-203ENST00000444983 AGTPBP1Q9UPW5 1226 aa17.54■□□□□ 0.4
CCNE1-203ENST00000444983 USP17L15C9J2P7 530 aa17.53■□□□□ 0.4
CCNE1-203ENST00000444983 USP17L13C9JLJ4 530 aa17.53■□□□□ 0.4
CCNE1-203ENST00000444983 USP17L11C9JVI0 530 aa17.53■□□□□ 0.4
CCNE1-203ENST00000444983 USP17L18D6R9N7 530 aa17.53■□□□□ 0.4
CCNE1-203ENST00000444983 USP17L22D6RA61 530 aa17.53■□□□□ 0.4
CCNE1-203ENST00000444983 USP17L17D6RBQ6 530 aa17.53■□□□□ 0.4
CCNE1-203ENST00000444983 USP17L19D6RCP7 530 aa17.53■□□□□ 0.4
CCNE1-203ENST00000444983 USP17L20D6RJB6 530 aa17.53■□□□□ 0.4
CCNE1-203ENST00000444983 HMGN5P82970 282 aaKnown RBP17.53■□□□□ 0.4
CCNE1-203ENST00000444983 USP17L24Q0WX57 530 aa17.53■□□□□ 0.4
CCNE1-203ENST00000444983 PRPF38AQ8NAV1 312 aaKnown RBP17.53■□□□□ 0.4
CCNE1-203ENST00000444983 BRI3BPQ8WY22 251 aa17.53■□□□□ 0.4
CCNE1-203ENST00000444983 V9GY48 417 aaPredicted RBP17.53■□□□□ 0.4
CCNE1-203ENST00000444983 SSRP1Q08945 709 aaKnown RBP17.52■□□□□ 0.4
CCNE1-203ENST00000444983 MKRN3Q13064 507 aaKnown RBP17.52■□□□□ 0.4
CCNE1-203ENST00000444983 SYDE2Q5VT97 1194 aa17.52■□□□□ 0.4
CCNE1-203ENST00000444983 PTPN18Q99952 460 aa17.52■□□□□ 0.4
CCNE1-203ENST00000444983 SLF1Q9BQI6 1058 aa17.52■□□□□ 0.4
CCNE1-203ENST00000444983 PPP1R9AQ9ULJ8 1098 aa17.52■□□□□ 0.4
CCNE1-203ENST00000444983 MYPNQ86TC9 1320 aa17.52■□□□□ 0.4
CCNE1-203ENST00000444983 CCL15-CCL14A0A0B4J2E2 113 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 GJB2P29033 226 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 DDIT3P35638 169 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 COG2Q14746 738 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 CCL15Q16663 113 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 GADL1Q6ZQY3 521 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 DDX11Q96FC9 970 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 PIGSQ96S52 555 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 SLC26A6Q9BXS9 759 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 TANGO6Q9C0B7 1094 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 FOXD4L1Q9NU39 408 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.39
CCNE1-203ENST00000444983 SMC3Q9UQE7 1217 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 SLC45A1Q9Y2W3 748 aa17.52■□□□□ 0.39
CCNE1-203ENST00000444983 FLOT1O75955 427 aa17.51■□□□□ 0.39
CCNE1-203ENST00000444983 DEXIO95424 95 aa17.51■□□□□ 0.39
CCNE1-203ENST00000444983 DSG3P32926 999 aa17.51■□□□□ 0.39
CCNE1-203ENST00000444983 POTEEQ6S8J3 1075 aa17.51■□□□□ 0.39
CCNE1-203ENST00000444983 TRIM22Q8IYM9 498 aa17.51■□□□□ 0.39
CCNE1-203ENST00000444983 SPRYD3Q8NCJ5 442 aa17.51■□□□□ 0.39
CCNE1-203ENST00000444983 RANBP17Q9H2T7 1088 aaKnown RBP17.51■□□□□ 0.39
CCNE1-203ENST00000444983 RBM27Q9P2N5 1060 aaKnown RBP17.51■□□□□ 0.39
CCNE1-203ENST00000444983 A0A0G2JMZ2 1700 aa17.5■□□□□ 0.39
CCNE1-203ENST00000444983 hCG_1642624A0A1W2PR95 340 aa17.5■□□□□ 0.39
CCNE1-203ENST00000444983 MANSC4A6NHS7 340 aaPredicted RBP17.5■□□□□ 0.39
CCNE1-203ENST00000444983 ZBTB5O15062 677 aa17.5■□□□□ 0.39
CCNE1-203ENST00000444983 HSP90AA1P07900 732 aaKnown RBP17.5■□□□□ 0.39
CCNE1-203ENST00000444983 PFKFB3Q16875 520 aaPredicted RBP17.5■□□□□ 0.39
CCNE1-203ENST00000444983 DEFB115Q30KQ5 88 aa17.5■□□□□ 0.39
CCNE1-203ENST00000444983 LBX2Q6XYB7 198 aa17.5■□□□□ 0.39
CCNE1-203ENST00000444983 ANKRD23Q86SG2 305 aa17.5■□□□□ 0.39
CCNE1-203ENST00000444983 CWC22Q9HCG8 908 aaKnown RBP17.5■□□□□ 0.39
CCNE1-203ENST00000444983 VAT1LQ9HCJ6 419 aa17.5■□□□□ 0.39
CCNE1-203ENST00000444983 PNMA6FA0A0J9YX94 578 aa17.49■□□□□ 0.39
CCNE1-203ENST00000444983 BTBD19C9JJ37 291 aa17.49■□□□□ 0.39
CCNE1-203ENST00000444983 PPP1R11O60927 126 aaPredicted RBP17.49■□□□□ 0.39
CCNE1-203ENST00000444983 CYP4F22Q6NT55 531 aa17.49■□□□□ 0.39
CCNE1-203ENST00000444983 FAM43AQ8N2R8 423 aa17.49■□□□□ 0.39
CCNE1-203ENST00000444983 REPS2Q8NFH8 660 aa17.49■□□□□ 0.39
CCNE1-203ENST00000444983 KIFC2Q96AC6 838 aa17.49■□□□□ 0.39
CCNE1-203ENST00000444983 SHISA4Q96DD7 197 aa17.49■□□□□ 0.39
CCNE1-203ENST00000444983 RRP36Q96EU6 259 aaKnown RBP17.49■□□□□ 0.39
CCNE1-203ENST00000444983 AIFM3Q96NN9 605 aa17.49■□□□□ 0.39
CCNE1-203ENST00000444983 ASCC2Q9H1I8 757 aaPredicted RBP17.49■□□□□ 0.39
CCNE1-203ENST00000444983 SLC38A10Q9HBR0 1119 aa17.49■□□□□ 0.39
CCNE1-203ENST00000444983 HOXC10Q9NYD6 342 aa17.49■□□□□ 0.39
CCNE1-203ENST00000444983 ISY1Q9ULR0 285 aaKnown RBP17.49■□□□□ 0.39
CCNE1-203ENST00000444983 COL11A1P12107 1806 aaPredicted RBP17.49■□□□□ 0.39
CCNE1-203ENST00000444983 SPDYE16A6NNV3 312 aaPredicted RBP17.48■□□□□ 0.39
CCNE1-203ENST00000444983 VWA5AO00534 786 aa17.48■□□□□ 0.39
CCNE1-203ENST00000444983 FDX1P10109 184 aa17.48■□□□□ 0.39
CCNE1-203ENST00000444983 SCG2P13521 617 aa17.48■□□□□ 0.39
CCNE1-203ENST00000444983 INHBEP58166 350 aa17.48■□□□□ 0.39
CCNE1-203ENST00000444983 IKQ13123 557 aaPredicted RBP17.48■□□□□ 0.39
CCNE1-203ENST00000444983 CDC37Q16543 378 aaPredicted RBP17.48■□□□□ 0.39
CCNE1-203ENST00000444983 QRICH1Q2TAL8 776 aa17.48■□□□□ 0.39
CCNE1-203ENST00000444983 ZIC5Q96T25 663 aa17.48■□□□□ 0.39
CCNE1-203ENST00000444983 P2RX7Q99572 595 aaKnown RBP17.48■□□□□ 0.39
CCNE1-203ENST00000444983 ZNF536O15090 1300 aa17.48■□□□□ 0.39
CCNE1-203ENST00000444983 TM4SF4P48230 202 aa17.48■□□□□ 0.39
CCNE1-203ENST00000444983 PABPC4Q13310 644 aaKnown RBP eCLIP17.48■□□□□ 0.394e-7■■■■□ 23.4
CCNE1-203ENST00000444983 RGS22Q8NE09 1264 aa17.48■□□□□ 0.39
CCNE1-203ENST00000444983 ATG4CQ96DT6 458 aa17.48■□□□□ 0.39
CCNE1-203ENST00000444983 SMCHD1A6NHR9 2005 aa17.47■□□□□ 0.39
CCNE1-203ENST00000444983 PDHXO00330 501 aa17.47■□□□□ 0.39
CCNE1-203ENST00000444983 IGF2BP3O00425 579 aaKnown RBP eCLIP17.47■□□□□ 0.39
CCNE1-203ENST00000444983 AKAP17AQ02040 695 aaKnown RBP17.47■□□□□ 0.39
CCNE1-203ENST00000444983 HOMER1Q86YM7 354 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms