RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 DPCR1Q3MIW9 517 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 SPECC1Q5M775 1068 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 TMEM179Q6ZVK1 233 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 HOMER1Q86YM7 354 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 OGFOD1Q8N543 542 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 ERCC4Q92889 916 aaPredicted RBP17.86■□□□□ 0.45
SNX13-204ENST00000444712 MKL1Q969V6 931 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 PIM2Q9P1W9 311 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 DACH1Q9UI36 760 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 SMCO2A6NFE2 343 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 IKBKBO14920 756 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 MCM7P33993 719 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 LONP1P36776 959 aaKnown RBP17.85■□□□□ 0.45
SNX13-204ENST00000444712 TXLNAP40222 546 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 CACNB3P54284 484 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 PNOCQ13519 176 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 ZFPM1Q8IX07 1006 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 NIM1KQ8IY84 436 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 AOPEPQ8N6M6 819 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 DCAF4Q8WV16 495 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 PIGSQ96S52 555 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 TDRD3Q9H7E2 651 aaKnown RBP17.85■□□□□ 0.45
SNX13-204ENST00000444712 DNAJC18Q9H819 358 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 FER1L6Q2WGJ9 1857 aa17.85■□□□□ 0.45
SNX13-204ENST00000444712 ACTN4O43707 911 aaKnown RBP17.84■□□□□ 0.45
SNX13-204ENST00000444712 EIF6P56537 245 aaKnown RBP17.84■□□□□ 0.45
SNX13-204ENST00000444712 MDM2Q00987 491 aaPredicted RBP17.84■□□□□ 0.45
SNX13-204ENST00000444712 NONOQ15233 471 aaKnown RBP eCLIP17.84■□□□□ 0.45
SNX13-204ENST00000444712 NOM1Q5C9Z4 860 aaKnown RBP17.84■□□□□ 0.45
SNX13-204ENST00000444712 NT5DC1Q5TFE4 455 aa17.84■□□□□ 0.45
SNX13-204ENST00000444712 SERTAD1Q9UHV2 236 aa17.84■□□□□ 0.45
SNX13-204ENST00000444712 HERC5Q9UII4 1024 aaKnown RBP17.84■□□□□ 0.45
SNX13-204ENST00000444712 PCDHAC2Q9Y5I4 1007 aa17.84■□□□□ 0.45
SNX13-204ENST00000444712 FRMPD2Q68DX3 1309 aaPredicted RBP17.84■□□□□ 0.45
SNX13-204ENST00000444712 VWA3AA6NCI4 1184 aa17.84■□□□□ 0.45
SNX13-204ENST00000444712 MYO1BO43795 1136 aa17.84■□□□□ 0.45
SNX13-204ENST00000444712 ZNF500O60304 480 aaPredicted RBP17.84■□□□□ 0.45
SNX13-204ENST00000444712 SMC2O95347 1197 aa17.84■□□□□ 0.45
SNX13-204ENST00000444712 AGBL3Q8NEM8 1001 aa17.84■□□□□ 0.45
SNX13-204ENST00000444712 SYMPKQ92797 1274 aaKnown RBP17.84■□□□□ 0.45
SNX13-204ENST00000444712 SMARCE1Q969G3 411 aa17.84■□□□□ 0.45
SNX13-204ENST00000444712 MRFAP1L1Q96HT8 127 aa17.84■□□□□ 0.45
SNX13-204ENST00000444712 ZNRF3Q9ULT6 936 aa17.84■□□□□ 0.45
SNX13-204ENST00000444712 SYNPO2Q9UMS6 1093 aa17.84■□□□□ 0.45
SNX13-204ENST00000444712 PNMA6FA0A0J9YX94 578 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 SPDYE2BA6NHP3 402 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 BIN1O00499 593 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 SLFN14P0C7P3 912 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 SPDYE6P0CI01 402 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 PRPHP41219 470 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 MMP14P50281 582 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 DLGAP5Q15398 846 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 CCDC96Q2M329 555 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 SH3BP5LQ7L8J4 393 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 RASGRP2Q7LDG7 609 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 GMLQ99445 158 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 VAT1LQ9HCJ6 419 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 PCDHA5Q9Y5H7 936 aa17.83■□□□□ 0.45
SNX13-204ENST00000444712 PSMD14O00487 310 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 WNT7AO00755 349 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 ATP2B2Q01814 1243 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 REXO1Q8N1G1 1221 aaKnown RBP17.82■□□□□ 0.44
SNX13-204ENST00000444712 PRMT6Q96LA8 375 aaPredicted RBP17.82■□□□□ 0.44
SNX13-204ENST00000444712 UBA5Q9GZZ9 404 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 ZNF277Q9NRM2 450 aaPredicted RBP17.82■□□□□ 0.44
SNX13-204ENST00000444712 ADCY7P51828 1080 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 ABCB5Q2M3G0 1257 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 CT47A1Q5JQC4 288 aaPredicted RBP17.82■□□□□ 0.44
SNX13-204ENST00000444712 FKBP1CQ5VVH2 108 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 DRC7Q8IY82 874 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 IQUBQ8NA54 791 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 MTMR14Q8NCE2 650 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 RASGRP4Q8TDF6 673 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 MTFR1LQ9H019 292 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 GLT8D2Q9H1C3 349 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 CPVLQ9H3G5 476 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 GPCPD1Q9NPB8 672 aa17.82■□□□□ 0.44
SNX13-204ENST00000444712 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.82■□□□□ 0.44
SNX13-204ENST00000444712 ICA1Q05084 483 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 INF2Q27J81 1249 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 RBM26Q5T8P6 1007 aaKnown RBP17.81■□□□□ 0.44
SNX13-204ENST00000444712 DTHD1Q6ZMT9 781 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 PDILTQ8N807 584 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 C4orf32Q8N8J7 132 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 MLKLQ8NB16 471 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 DHX58Q96C10 678 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 EPSTI1Q96J88 318 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 CSRNP1Q96S65 589 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 RAD17O75943 681 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 EEF2P13639 858 aaKnown RBP17.81■□□□□ 0.44
SNX13-204ENST00000444712 SARSP49591 514 aaKnown RBP17.81■□□□□ 0.44
SNX13-204ENST00000444712 DALRD3Q5D0E6 543 aaKnown RBP17.81■□□□□ 0.44
SNX13-204ENST00000444712 NEK8Q86SG6 692 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 CLEC10AQ8IUN9 316 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 ADGRF4Q8IZF3 695 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 FAM151AQ8WW52 585 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 JMJD4Q9H9V9 463 aa17.81■□□□□ 0.44
SNX13-204ENST00000444712 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.81■□□□□ 0.44
SNX13-204ENST00000444712 COL4A5P29400 1685 aa17.8■□□□□ 0.44
SNX13-204ENST00000444712 A0A087WWV3 80 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms