RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TBC1D10CQ8IV04 446 aa12.91□□□□□ -0.34
SF3A1-203ENST00000444440 ANKLE1Q8NAG6 615 aa12.91□□□□□ -0.34
SF3A1-203ENST00000444440 GMCL1P1Q8NEA9 526 aa12.91□□□□□ -0.34
SF3A1-203ENST00000444440 MAML3Q96JK9 1138 aa12.91□□□□□ -0.34
SF3A1-203ENST00000444440 MROH8Q9H579 483 aa12.91□□□□□ -0.34
SF3A1-203ENST00000444440 ZNF287Q9HBT7 754 aa12.91□□□□□ -0.34
SF3A1-203ENST00000444440 ZMYM6O95789 1325 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 TSPY2A6NKD2 308 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 ORC4O43929 436 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 RANBP6O60518 1105 aaKnown RBP12.9□□□□□ -0.34
SF3A1-203ENST00000444440 SLC25A27O95847 323 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 SLC3A2P08195 630 aaKnown RBP12.9□□□□□ -0.34
SF3A1-203ENST00000444440 COL6A1P12109 1028 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 TAL1P17542 331 aaPredicted RBP12.9□□□□□ -0.34
SF3A1-203ENST00000444440 MFSD14CQ5VZR4 134 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 ANO1Q5XXA6 986 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 OLFML2BQ68BL8 750 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 SNRNP48Q6IEG0 339 aaKnown RBP12.9□□□□□ -0.34
SF3A1-203ENST00000444440 CWC27Q6UX04 472 aaKnown RBP12.9□□□□□ -0.34
SF3A1-203ENST00000444440 NECAB2Q7Z6G3 386 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 ABRAQ8N0Z2 381 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 KIFC2Q96AC6 838 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 MMP19Q99542 508 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 HTATIP2Q9BUP3 242 aa12.9□□□□□ -0.34
SF3A1-203ENST00000444440 RAVER2Q9HCJ3 691 aaKnown RBP12.9□□□□□ -0.34
SF3A1-203ENST00000444440 NEDD4P46934 1319 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 FCER1AP12319 257 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 BMP3P12645 472 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 MCCP23508 829 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 SNAP25P60880 206 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 ZNF792Q3KQV3 632 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 RRP12Q5JTH9 1297 aaKnown RBP12.89□□□□□ -0.35
SF3A1-203ENST00000444440 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 KCTD1Q719H9 257 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 CPXCR1Q8N123 301 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 PRPF38AQ8NAV1 312 aaKnown RBP12.89□□□□□ -0.35
SF3A1-203ENST00000444440 FGD4Q96M96 766 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 PRO3102Q9H379 93 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 SLC38A10Q9HBR0 1119 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 DDX20Q9UHI6 824 aaKnown RBP12.89□□□□□ -0.35
SF3A1-203ENST00000444440 SYNPO2Q9UMS6 1093 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 STX8Q9UNK0 236 aa12.89□□□□□ -0.35
SF3A1-203ENST00000444440 ZNF536O15090 1300 aa12.88□□□□□ -0.35
SF3A1-203ENST00000444440 TMEM232C9JQI7 657 aa12.88□□□□□ -0.35
SF3A1-203ENST00000444440 CNGA1P29973 690 aa12.88□□□□□ -0.35
SF3A1-203ENST00000444440 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
SF3A1-203ENST00000444440 RCSD1Q6JBY9 416 aa12.88□□□□□ -0.35
SF3A1-203ENST00000444440 TICAM2Q86XR7 235 aa12.88□□□□□ -0.35
SF3A1-203ENST00000444440 TEX13BQ9BXU2 312 aa12.88□□□□□ -0.35
SF3A1-203ENST00000444440 C11orf49Q9H6J7 331 aa12.88□□□□□ -0.35
SF3A1-203ENST00000444440 FEM1BQ9UK73 627 aa12.88□□□□□ -0.35
SF3A1-203ENST00000444440 MTMR7Q9Y216 660 aa12.88□□□□□ -0.35
SF3A1-203ENST00000444440 DNAJC25-GNG10A0A024R161 153 aa12.87□□□□□ -0.35
SF3A1-203ENST00000444440 ATP2A1O14983 1001 aa12.87□□□□□ -0.35
SF3A1-203ENST00000444440 EVI5O60447 810 aa12.87□□□□□ -0.35
SF3A1-203ENST00000444440 CAPN2P17655 700 aa12.87□□□□□ -0.35
SF3A1-203ENST00000444440 LRRC26Q2I0M4 334 aa12.87□□□□□ -0.35
SF3A1-203ENST00000444440 TTC22Q5TAA0 569 aa12.87□□□□□ -0.35
SF3A1-203ENST00000444440 TTBK2Q6IQ55 1244 aa12.87□□□□□ -0.35
SF3A1-203ENST00000444440 C7orf61Q8IZ16 206 aa12.87□□□□□ -0.35
SF3A1-203ENST00000444440 GMCL1Q96IK5 515 aa12.87□□□□□ -0.35
SF3A1-203ENST00000444440 TOMM22Q9NS69 142 aa12.87□□□□□ -0.35
SF3A1-203ENST00000444440 RBM27Q9P2N5 1060 aaKnown RBP12.87□□□□□ -0.35
SF3A1-203ENST00000444440 KIAA1217Q5T5P2 1943 aa12.86□□□□□ -0.35
SF3A1-203ENST00000444440 BAZ2BQ9UIF8 2168 aaKnown RBP12.86□□□□□ -0.35
SF3A1-203ENST00000444440 SLC1A4P43007 532 aa12.86□□□□□ -0.35
SF3A1-203ENST00000444440 FXR1P51114 621 aaKnown RBP eCLIP12.86□□□□□ -0.35
SF3A1-203ENST00000444440 AKNAD1Q5T1N1 836 aa12.86□□□□□ -0.35
SF3A1-203ENST00000444440 GJC2Q5T442 439 aaPredicted RBP12.86□□□□□ -0.35
SF3A1-203ENST00000444440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.86□□□□□ -0.35
SF3A1-203ENST00000444440 STAG1Q8WVM7 1258 aa12.86□□□□□ -0.35
SF3A1-203ENST00000444440 LENG1Q96BZ8 264 aaPredicted RBP12.86□□□□□ -0.35
SF3A1-203ENST00000444440 AGBL1Q96MI9 1066 aa12.86□□□□□ -0.35
SF3A1-203ENST00000444440 TMEM47Q9BQJ4 181 aa12.86□□□□□ -0.35
SF3A1-203ENST00000444440 ZKSCAN3Q9BRR0 538 aa12.86□□□□□ -0.35
SF3A1-203ENST00000444440 DIAPH3Q9NSV4 1193 aa12.86□□□□□ -0.35
SF3A1-203ENST00000444440 ZMYND8Q9ULU4 1186 aaPredicted RBP12.86□□□□□ -0.35
SF3A1-203ENST00000444440 SEPT4O43236 478 aa12.85□□□□□ -0.35
SF3A1-203ENST00000444440 ZBED4O75132 1171 aa12.85□□□□□ -0.35
SF3A1-203ENST00000444440 ZNF865P0CJ78 1059 aaPredicted RBP12.85□□□□□ -0.35
SF3A1-203ENST00000444440 SYN1P17600 705 aa12.85□□□□□ -0.35
SF3A1-203ENST00000444440 SLC16A2P36021 539 aa12.85□□□□□ -0.35
SF3A1-203ENST00000444440 STAT2P52630 851 aa12.85□□□□□ -0.35
SF3A1-203ENST00000444440 KCTD2Q14681 263 aa12.85□□□□□ -0.35
SF3A1-203ENST00000444440 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
SF3A1-203ENST00000444440 TINF2Q9BSI4 451 aa12.85□□□□□ -0.35
SF3A1-203ENST00000444440 HOMER2Q9NSB8 354 aa12.85□□□□□ -0.35
SF3A1-203ENST00000444440 TCP11L1Q9NUJ3 509 aa12.85□□□□□ -0.35
SF3A1-203ENST00000444440 PRR12Q9ULL5 1215 aa12.85□□□□□ -0.35
SF3A1-203ENST00000444440 ISY1Q9ULR0 285 aaKnown RBP12.85□□□□□ -0.35
SF3A1-203ENST00000444440 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
SF3A1-203ENST00000444440 ASTN1O14525 1302 aa12.85□□□□□ -0.35
SF3A1-203ENST00000444440 FRMPD2Q68DX3 1309 aaPredicted RBP12.85□□□□□ -0.35
SF3A1-203ENST00000444440 ADCY6O43306 1168 aa12.84□□□□□ -0.35
SF3A1-203ENST00000444440 PLA2G6O60733 806 aa12.84□□□□□ -0.35
SF3A1-203ENST00000444440 SNAI1O95863 264 aaPredicted RBP12.84□□□□□ -0.35
SF3A1-203ENST00000444440 COPB2P35606 906 aa12.84□□□□□ -0.35
SF3A1-203ENST00000444440 MUM1L1Q5H9M0 696 aa12.84□□□□□ -0.35
SF3A1-203ENST00000444440 CCDC174Q6PII3 467 aa12.84□□□□□ -0.35
SF3A1-203ENST00000444440 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms