RNA–Protein interactions for RNA: ENST00000444376.7

HNRNPU-205, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-205ENST00000444376 WDR62O43379 1518 aa17.99■□□□□ 0.47
HNRNPU-205ENST00000444376 DEPTORQ8TB45 409 aa17.99■□□□□ 0.47
HNRNPU-205ENST00000444376 SLFN12Q8IYM2 578 aa17.99■□□□□ 0.47
HNRNPU-205ENST00000444376 RIOK1Q9BRS2 568 aaKnown RBP17.99■□□□□ 0.47
HNRNPU-205ENST00000444376 H7C1D1 291 aa17.99■□□□□ 0.47
HNRNPU-205ENST00000444376 RBM6P78332 1123 aaKnown RBP17.99■□□□□ 0.47
HNRNPU-205ENST00000444376 SH2D4BQ5SQS7 431 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 MED23Q9ULK4 1368 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 ATP1A2P50993 1020 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 PPP2R5EQ16537 467 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 NLRX1Q86UT6 975 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 DPH5Q9H2P9 285 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 CLIC4Q9Y696 253 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 PZPP20742 1482 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 GTPBP6O43824 516 aaPredicted RBP17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 N4BP1O75113 896 aaKnown RBP17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 CUL4BQ13620 913 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 CCDC24Q8N4L8 307 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 SUPT20HQ8NEM7 779 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 NDUFA8P51970 172 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 POLR2FP61218 127 aaKnown RBP17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 USP40Q9NVE5 1235 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 FANCLQ9NW38 375 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 H0YIN7 160 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 PDE6CP51160 858 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 HOMER3Q9NSC5 361 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 PCDHA7Q9UN72 937 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 RGS12O14924 1447 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 PTPROQ16827 1216 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 TBC1D22AQ8WUA7 517 aa17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 TACO1Q9BSH4 297 aaKnown RBP17.98■□□□□ 0.47
HNRNPU-205ENST00000444376 OR52Z1P0C646 297 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 PRR16Q569H4 304 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 TSC1Q92574 1164 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 CLIC6Q96NY7 704 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 PSTPIP2Q9H939 334 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 SPATS2Q86XZ4 545 aaKnown RBP17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 DDX25Q9UHL0 483 aaKnown RBP17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 TRPC6Q9Y210 931 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 ZMYM3Q14202 1370 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 GOLGA5Q8TBA6 731 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 ARHGAP42A6NI28 874 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 K7ENM7 598 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 HADHQ16836 314 aaKnown RBP17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 SPATA1Q5VX52 437 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 DNAJC10Q8IXB1 793 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 FANCBQ8NB91 859 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 MRFAP1L1Q96HT8 127 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 PALD1Q9ULE6 856 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 M0QZ92 97 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 HSPD1P10809 573 aaKnown RBP17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 ARHGEF16Q5VV41 709 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 TYW1Q9NV66 732 aaKnown RBP17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 WDR70Q9NW82 654 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 INSRP06213 1382 aa17.97■□□□□ 0.47
HNRNPU-205ENST00000444376 USP17L12C9JPN9 530 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 USP17L21D6R901 530 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 CDC25BP30305 580 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 ZNF827Q17R98 1081 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 IRX4P78413 519 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 LARGE2Q8N3Y3 721 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 GBP5Q96PP8 586 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 MAP3K21Q5TCX8 1036 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 MCTP2Q6DN12 878 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 TEKT1Q969V4 418 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 MED10Q9BTT4 135 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 ST7Q9NRC1 585 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 PCDHA12Q9UN75 941 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 THAP12O43422 761 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 TCP1P17987 556 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 SCYL2Q6P3W7 929 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 NEK8Q86SG6 692 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 GSDMBQ8TAX9 411 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 LIG4P49917 911 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 FAM71BQ8TC56 605 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 SSH3Q8TE77 659 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 SYMPKQ92797 1274 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 HAUS4Q9H6D7 363 aa17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 ARMCX3Q9UH62 379 aaPredicted RBP17.96■□□□□ 0.47
HNRNPU-205ENST00000444376 IFNB1P01574 187 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 NXNQ6DKJ4 435 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 RIPOR2Q9Y4F9 1068 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 DDAH1O94760 285 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 YARSP54577 528 aaKnown RBP17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 TCIRG1Q13488 830 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 USH1CQ9Y6N9 552 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 SCG2P13521 617 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 TRIM50Q86XT4 487 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 SLC39A2Q9NP94 309 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 GALNT17Q6IS24 598 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 GPKOWQ92917 476 aaPredicted RBP eCLIP17.95■□□□□ 0.461e-6■□□□□ 9.1
HNRNPU-205ENST00000444376 PPP1R13BQ96KQ4 1090 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 ATF2P15336 505 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 ADAT2Q7Z6V5 191 aaKnown RBP17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 CHURC1Q8WUH1 139 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 ZNF215Q9UL58 517 aaPredicted RBP17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 SDR42E1Q8WUS8 393 aa17.95■□□□□ 0.46
HNRNPU-205ENST00000444376 RFC1P35251 1148 aaPredicted RBP17.94■□□□□ 0.46
HNRNPU-205ENST00000444376 DDX27Q96GQ7 796 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms