RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 MYH4Q9Y623 1939 aa23.75■■□□□ 1.39
LRCH3-208ENST00000443727 NMT2O60551 498 aa23.75■■□□□ 1.39
LRCH3-208ENST00000443727 SLC1A4P43007 532 aa23.75■■□□□ 1.39
LRCH3-208ENST00000443727 HAND2P61296 217 aa23.75■■□□□ 1.39
LRCH3-208ENST00000443727 C11orf49Q9H6J7 331 aa23.75■■□□□ 1.39
LRCH3-208ENST00000443727 ZMYM6O95789 1325 aa23.75■■□□□ 1.39
LRCH3-208ENST00000443727 CEP290O15078 2479 aa23.75■■□□□ 1.39
LRCH3-208ENST00000443727 PARP14Q460N5 1801 aa23.75■■□□□ 1.39
LRCH3-208ENST00000443727 TMEM232C9JQI7 657 aa23.74■■□□□ 1.39
LRCH3-208ENST00000443727 MSCO60682 206 aa23.74■■□□□ 1.39
LRCH3-208ENST00000443727 PGK2P07205 417 aa23.74■■□□□ 1.39
LRCH3-208ENST00000443727 LHX8Q68G74 356 aa23.74■■□□□ 1.39
LRCH3-208ENST00000443727 IL17RBQ9NRM6 502 aa23.74■■□□□ 1.39
LRCH3-208ENST00000443727 ZNF236Q9UL36 1845 aa23.73■■□□□ 1.39
LRCH3-208ENST00000443727 MCCP23508 829 aa23.73■■□□□ 1.39
LRCH3-208ENST00000443727 MFSD6Q6ZSS7 791 aa23.73■■□□□ 1.39
LRCH3-208ENST00000443727 CHURC1Q8WUH1 139 aa23.73■■□□□ 1.39
LRCH3-208ENST00000443727 GMCL1Q96IK5 515 aa23.73■■□□□ 1.39
LRCH3-208ENST00000443727 MAML3Q96JK9 1138 aa23.73■■□□□ 1.39
LRCH3-208ENST00000443727 DDX20Q9UHI6 824 aaKnown RBP23.73■■□□□ 1.39
LRCH3-208ENST00000443727 MTMR7Q9Y216 660 aa23.73■■□□□ 1.39
LRCH3-208ENST00000443727 TACC3Q9Y6A5 838 aa23.73■■□□□ 1.39
LRCH3-208ENST00000443727 FGRP09769 529 aa23.72■■□□□ 1.39
LRCH3-208ENST00000443727 STAT2P52630 851 aa23.72■■□□□ 1.39
LRCH3-208ENST00000443727 SLC38A10Q9HBR0 1119 aa23.72■■□□□ 1.39
LRCH3-208ENST00000443727 RAVER2Q9HCJ3 691 aaKnown RBP23.72■■□□□ 1.39
LRCH3-208ENST00000443727 COL11A1P12107 1806 aaPredicted RBP23.72■■□□□ 1.39
LRCH3-208ENST00000443727 CYBAP13498 195 aa23.71■■□□□ 1.39
LRCH3-208ENST00000443727 AKNAD1Q5T1N1 836 aa23.71■■□□□ 1.39
LRCH3-208ENST00000443727 FAM160B2Q86V87 743 aa23.71■■□□□ 1.39
LRCH3-208ENST00000443727 TRPV1Q8NER1 839 aa23.71■■□□□ 1.39
LRCH3-208ENST00000443727 DDX11Q96FC9 970 aa23.71■■□□□ 1.39
LRCH3-208ENST00000443727 RNF41Q9H4P4 317 aaPredicted RBP23.71■■□□□ 1.39
LRCH3-208ENST00000443727 ZNF213O14771 459 aa23.7■■□□□ 1.38
LRCH3-208ENST00000443727 ATP2A1O14983 1001 aa23.7■■□□□ 1.38
LRCH3-208ENST00000443727 FDX1P10109 184 aa23.7■■□□□ 1.38
LRCH3-208ENST00000443727 PCP11498 1178 aaKnown RBP23.7■■□□□ 1.38
LRCH3-208ENST00000443727 PDE4AP27815 886 aa23.7■■□□□ 1.38
LRCH3-208ENST00000443727 MNX1P50219 401 aaPredicted RBP23.7■■□□□ 1.38
LRCH3-208ENST00000443727 CCDC96Q2M329 555 aa23.7■■□□□ 1.38
LRCH3-208ENST00000443727 HABP4Q5JVS0 413 aaKnown RBP23.7■■□□□ 1.38
LRCH3-208ENST00000443727 KCTD1Q719H9 257 aa23.7■■□□□ 1.38
LRCH3-208ENST00000443727 STAG1Q8WVM7 1258 aa23.7■■□□□ 1.38
LRCH3-208ENST00000443727 COLQQ9Y215 455 aaPredicted RBP23.7■■□□□ 1.38
LRCH3-208ENST00000443727 RIPK3Q9Y572 518 aa23.7■■□□□ 1.38
LRCH3-208ENST00000443727 IGHA2P01877 340 aa23.69■■□□□ 1.38
LRCH3-208ENST00000443727 OAZ1P54368 228 aa23.69■■□□□ 1.38
LRCH3-208ENST00000443727 PRAMEF19Q5SWL8 479 aa23.69■■□□□ 1.38
LRCH3-208ENST00000443727 TTC22Q5TAA0 569 aa23.69■■□□□ 1.38
LRCH3-208ENST00000443727 RCSD1Q6JBY9 416 aa23.69■■□□□ 1.38
LRCH3-208ENST00000443727 DIS3Q9Y2L1 958 aaKnown RBP23.69■■□□□ 1.38
LRCH3-208ENST00000443727 TOP1P11387 765 aaKnown RBP23.68■■□□□ 1.38
LRCH3-208ENST00000443727 ZNF792Q3KQV3 632 aa23.68■■□□□ 1.38
LRCH3-208ENST00000443727 CHRDL2Q6WN34 429 aa23.68■■□□□ 1.38
LRCH3-208ENST00000443727 TBC1D10CQ8IV04 446 aa23.68■■□□□ 1.38
LRCH3-208ENST00000443727 C7orf61Q8IZ16 206 aa23.68■■□□□ 1.38
LRCH3-208ENST00000443727 ANKRD35Q8N283 1001 aa23.68■■□□□ 1.38
LRCH3-208ENST00000443727 HOMER2Q9NSB8 354 aa23.68■■□□□ 1.38
LRCH3-208ENST00000443727 FBXO40Q9UH90 709 aa23.68■■□□□ 1.38
LRCH3-208ENST00000443727 SEPT4O43236 478 aa23.67■■□□□ 1.38
LRCH3-208ENST00000443727 MYCNP04198 464 aaPredicted RBP23.67■■□□□ 1.38
LRCH3-208ENST00000443727 CHST13Q8NET6 341 aa23.67■■□□□ 1.38
LRCH3-208ENST00000443727 DCAF4Q8WV16 495 aa23.67■■□□□ 1.38
LRCH3-208ENST00000443727 ESR2Q92731 530 aa23.67■■□□□ 1.38
LRCH3-208ENST00000443727 TINF2Q9BSI4 451 aa23.67■■□□□ 1.38
LRCH3-208ENST00000443727 TCP11L1Q9NUJ3 509 aa23.67■■□□□ 1.38
LRCH3-208ENST00000443727 ANO1Q5XXA6 986 aa23.66■■□□□ 1.38
LRCH3-208ENST00000443727 ARRDC4Q8NCT1 418 aa23.66■■□□□ 1.38
LRCH3-208ENST00000443727 TMEM47Q9BQJ4 181 aa23.66■■□□□ 1.38
LRCH3-208ENST00000443727 DSCC1Q9BVC3 393 aa23.66■■□□□ 1.38
LRCH3-208ENST00000443727 CTNNA3Q9UI47 895 aa23.66■■□□□ 1.38
LRCH3-208ENST00000443727 CNPY2Q9Y2B0 182 aa23.66■■□□□ 1.38
LRCH3-208ENST00000443727 PLA2G6O60733 806 aa23.65■■□□□ 1.38
LRCH3-208ENST00000443727 GSPT1P15170 499 aaKnown RBP23.65■■□□□ 1.38
LRCH3-208ENST00000443727 NOVP48745 357 aa23.65■■□□□ 1.38
LRCH3-208ENST00000443727 IMMTQ16891 758 aaKnown RBP23.65■■□□□ 1.38
LRCH3-208ENST00000443727 NRBP1Q9UHY1 535 aa23.65■■□□□ 1.38
LRCH3-208ENST00000443727 PFASO15067 1338 aa23.64■■□□□ 1.38
LRCH3-208ENST00000443727 SLC34A2O95436 690 aa23.64■■□□□ 1.37
LRCH3-208ENST00000443727 COL6A1P12109 1028 aa23.64■■□□□ 1.37
LRCH3-208ENST00000443727 CCDC174Q6PII3 467 aa23.64■■□□□ 1.37
LRCH3-208ENST00000443727 RASGRP2Q7LDG7 609 aa23.64■■□□□ 1.37
LRCH3-208ENST00000443727 SENP6Q9GZR1 1112 aaPredicted RBP23.64■■□□□ 1.37
LRCH3-208ENST00000443727 PRR12Q9ULL5 1215 aa23.64■■□□□ 1.37
LRCH3-208ENST00000443727 NEDD4P46934 1319 aa23.63■■□□□ 1.37
LRCH3-208ENST00000443727 DNM1LO00429 736 aa23.63■■□□□ 1.37
LRCH3-208ENST00000443727 SNAP25P60880 206 aa23.63■■□□□ 1.37
LRCH3-208ENST00000443727 GJC2Q5T442 439 aaPredicted RBP23.63■■□□□ 1.37
LRCH3-208ENST00000443727 AGBL1Q96MI9 1066 aa23.63■■□□□ 1.37
LRCH3-208ENST00000443727 TTC14Q96N46 770 aa23.63■■□□□ 1.37
LRCH3-208ENST00000443727 ACAD9Q9H845 621 aa23.63■■□□□ 1.37
LRCH3-208ENST00000443727 GPCPD1Q9NPB8 672 aa23.63■■□□□ 1.37
LRCH3-208ENST00000443727 ZNFX1Q9P2E3 1918 aaKnown RBP23.63■■□□□ 1.37
LRCH3-208ENST00000443727 KBTBD13C9JR72 458 aa23.62■■□□□ 1.37
LRCH3-208ENST00000443727 ALAS1P13196 640 aa23.62■■□□□ 1.37
LRCH3-208ENST00000443727 IQCA1Q86XH1 822 aa23.62■■□□□ 1.37
LRCH3-208ENST00000443727 MSL3Q8N5Y2 521 aaKnown RBP23.62■■□□□ 1.37
LRCH3-208ENST00000443727 RUFY2Q8WXA3 655 aa23.62■■□□□ 1.37
LRCH3-208ENST00000443727 ZKSCAN3Q9BRR0 538 aa23.62■■□□□ 1.37
LRCH3-208ENST00000443727 RNF146Q9NTX7 359 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms