RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 TEX13BQ9BXU2 312 aa12.15□□□□□ -0.46
HLA-DQB1-206ENST00000443574 PORCNQ9H237 461 aa12.15□□□□□ -0.46
HLA-DQB1-206ENST00000443574 KAT14Q9H8E8 782 aa12.15□□□□□ -0.46
HLA-DQB1-206ENST00000443574 FBXO28Q9NVF7 368 aa12.15□□□□□ -0.46
HLA-DQB1-206ENST00000443574 SLC5A4Q9NY91 659 aa12.15□□□□□ -0.46
HLA-DQB1-206ENST00000443574 BTBD7Q9P203 1132 aa12.15□□□□□ -0.46
HLA-DQB1-206ENST00000443574 FRMPD3Q5JV73 1810 aa12.15□□□□□ -0.46
HLA-DQB1-206ENST00000443574 CENPFP49454 3210 aa12.15□□□□□ -0.46
HLA-DQB1-206ENST00000443574 SLC15A5A6NIM6 579 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 VWA5AO00534 786 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 STRNO43815 780 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 HMGCRP04035 888 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 OAZ1P54368 228 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 NCAPG2Q86XI2 1143 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ZNF333Q96JL9 665 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 TMEM47Q9BQJ4 181 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ZKSCAN3Q9BRR0 538 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 MOV10L1Q9BXT6 1211 aaKnown RBP12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 GABRQQ9UN88 632 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 MTMR7Q9Y216 660 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 TACC3Q9Y6A5 838 aa12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 KIAA0100Q14667 2235 aaKnown RBP12.14□□□□□ -0.47
HLA-DQB1-206ENST00000443574 E7EWF7 191 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 PLA2G6O60733 806 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 REC8O95072 547 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 XRCC5P13010 732 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ZKSCAN1P17029 563 aaPredicted RBP12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ERCC3P19447 782 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 MCCP23508 829 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 Q3C1V9 767 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 GPATCH4Q5T3I0 446 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 IFIT1BQ5T764 474 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 SNRNP48Q6IEG0 339 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 KCTD1Q719H9 257 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 RIOX2Q8IUF8 465 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 PNMA1Q8ND90 353 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 SH3TC2Q8TF17 1288 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 LSG1Q9H089 658 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 FBXO40Q9UH90 709 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ADAMTS5Q9UNA0 930 aa12.13□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ATP2A1O14983 1001 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 PEX10O60683 326 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 EIF5BO60841 1220 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 FCER1AP12319 257 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 CYP2B6P20813 491 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 PTPREP23469 700 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 STAT3P40763 770 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 SOX10P56693 466 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 MAP2K5Q13163 448 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 GRB14Q14449 540 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 KCTD2Q14681 263 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 TMEM132BQ14DG7 1078 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ABRAQ8N0Z2 381 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ENAHQ8N8S7 591 aaPredicted RBP12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 SLC38A10Q9HBR0 1119 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ZSWIM5Q9P217 1185 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 PNMA2Q9UL42 364 aa12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ZNF214Q9UL59 606 aaPredicted RBP12.12□□□□□ -0.47
HLA-DQB1-206ENST00000443574 IFIT3O14879 490 aaKnown RBP12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 INHAP05111 366 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 PDHBP11177 359 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ELNP15502 786 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 MCM5P33992 734 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 KRT32Q14532 448 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ASPRV1Q53RT3 343 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 MORN1Q5T089 497 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 CREB3L3Q68CJ9 461 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 DPP9Q86TI2 863 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 CPXCR1Q8N123 301 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 NKX2-3Q8TAU0 364 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ANKS1AQ92625 1134 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 MTA3Q9BTC8 594 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 GJD2Q9UKL4 321 aa12.11□□□□□ -0.47
HLA-DQB1-206ENST00000443574 SLC27A2O14975 620 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 PARP1P09874 1014 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 SNHG28P0DPA3 235 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 CAPN2P17655 700 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ADORA2AP29274 412 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ZNF543Q08ER8 600 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 WTAPQ15007 396 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 SYDE2Q5VT97 1194 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 POTEEQ6S8J3 1075 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 CHST13Q8NET6 341 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 REPS2Q8NFH8 660 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 CHMP4CQ96CF2 233 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 MMP19Q99542 508 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 PRR12Q9ULL5 1215 aa12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 FRMPD2Q68DX3 1309 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQB1-206ENST00000443574 MCM3APO60318 1980 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 EPB41L2O43491 1005 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 DHX16O60231 1041 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 MYCP01106 439 aaPredicted RBP12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 HOXC6P09630 235 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 CCL5P13501 91 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 SLC4A3P48751 1232 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 NECTIN1Q15223 517 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 TKFCQ3LXA3 575 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 TMEM67Q5HYA8 995 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms