RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 DUOX1Q9NRD9 1551 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 RBM47A0AV96 593 aaKnown RBP8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 FAM177BA6PVY3 158 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 EREGO14944 169 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 IGSF3O75054 1194 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 BBOX1O75936 387 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 NPR1P16066 1061 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 MX1P20591 662 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 RPS8P62241 208 aaKnown RBP8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 GRAPQ13588 217 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 PUM3Q15397 648 aaKnown RBP8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 BMP2KLQ5H9B9 411 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 RNFT1Q5M7Z0 435 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 ALG1LQ6GMV1 187 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 FBXO33Q7Z6M2 555 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 GRAPLQ8TC17 118 aaPredicted RBP8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 TMX4Q9H1E5 349 aaPredicted RBP8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 STAP2Q9UGK3 403 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 RIPOR2Q9Y4F9 1068 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 CACNA1SQ13698 1873 aa8.66□□□□□ -1.02
R3HDM1-210ENST00000443537 GLRX3O76003 335 aaKnown RBP8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 PDE8BO95263 885 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 ZNF16P17020 682 aaPredicted RBP8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 ADH6P28332 368 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 TAGLNQ01995 201 aaKnown RBP8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 MLLT1Q03111 559 aaPredicted RBP8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 HYAL2Q12891 473 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 METTL24Q5JXM2 366 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 STYK1Q6J9G0 422 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 ATG9AQ7Z3C6 839 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 NCAPG2Q86XI2 1143 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 SYNE4Q8N205 404 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 JARID2Q92833 1246 aaPredicted RBP8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 MASTLQ96GX5 879 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 CNTNAP3BQ96NU0 1288 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 NSUN5Q96P11 429 aaKnown RBP8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 CNTNAP3Q9BZ76 1288 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 SIL1Q9H173 461 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 CHRDQ9H2X0 955 aa8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 PA2G4Q9UQ80 394 aaKnown RBP8.65□□□□□ -1.02
R3HDM1-210ENST00000443537 SALL3Q9BXA9 1300 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 LTBP1Q14766 1721 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 H0YIN7 160 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 SIN3BO75182 1162 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 PRPF40AO75400 957 aaKnown RBP8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 SASH1O94885 1247 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 IFIT1P09914 478 aaKnown RBP8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 SRGNP10124 158 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 ARAFP10398 606 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 SLC5A1P13866 664 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 PDE1AP54750 535 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 UBE4AQ14139 1066 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 TNNI3KQ59H18 835 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 TMED8Q6PL24 325 aaPredicted RBP8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 CASC1Q6TDU7 716 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 SMIM5Q71RC9 77 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 AACSQ86V21 672 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 LPIN2Q92539 896 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 CCDC74AQ96AQ1 378 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 ZNF512BQ96KM6 892 aaPredicted RBP8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 SPACA7Q96KW9 195 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 AVENQ9NQS1 362 aaPredicted RBP8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 ECHDC1Q9NTX5 307 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 DNAJB12Q9NXW2 375 aaKnown RBP8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 FPGT-TNNI3KV9GXZ4 949 aa8.64□□□□□ -1.03
R3HDM1-210ENST00000443537 RFX7Q2KHR2 1363 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 AKAP11Q9UKA4 1901 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 SOX18P35713 384 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 RGS3P49796 1198 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 TGFB2P61812 414 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 PCSK7Q16549 785 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 ATP2B3Q16720 1220 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 LRRFIP1Q32MZ4 808 aaKnown RBP8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 CCDC158Q5M9N0 1113 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 SOGA3Q5TF21 947 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 HFE2Q6ZVN8 426 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 VGLL2Q8N8G2 317 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 FBF1Q8TES7 1133 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 DUSP9Q99956 384 aaKnown RBP8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 GGA1Q9UJY5 639 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 ARFGEF1Q9Y6D6 1849 aa8.63□□□□□ -1.03
R3HDM1-210ENST00000443537 CCDC88AQ3V6T2 1871 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 XDHP47989 1333 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 A0A1B0GUL7 405 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 GADD45BO75293 160 aaPredicted RBP8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 WFS1O76024 890 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 UQCRFS1P1P0C7P4 283 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 EDN3P14138 238 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 NRLP54845 237 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 SRSF11Q05519 484 aaKnown RBP8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 CHRNDQ07001 517 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 TFCP2Q12800 502 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 LRRC24Q50LG9 513 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 TTC22Q5TAA0 569 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 CNTROBQ8N137 903 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 KLHDC4Q8TBB5 520 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 OXCT2Q9BYC2 517 aaPredicted RBP8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 IL1RAPL2Q9NP60 686 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 NPHS2Q9NP85 383 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms