RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 C7orf61Q8IZ16 206 aa7.61□□□□□ -1.19
VPS50-206ENST00000443443 BHLHE22Q8NFJ8 381 aaPredicted RBP7.61□□□□□ -1.19
VPS50-206ENST00000443443 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.61□□□□□ -1.19
VPS50-206ENST00000443443 ZNF281Q9Y2X9 895 aa7.61□□□□□ -1.19
VPS50-206ENST00000443443 TMEM82A0PJX8 343 aa7.6□□□□□ -1.19
VPS50-206ENST00000443443 GUCY2CP25092 1073 aa7.6□□□□□ -1.19
VPS50-206ENST00000443443 PMS1P54277 932 aaKnown RBP7.6□□□□□ -1.19
VPS50-206ENST00000443443 UNC5AQ6ZN44 842 aa7.6□□□□□ -1.19
VPS50-206ENST00000443443 ZNF605Q86T29 641 aa7.6□□□□□ -1.19
VPS50-206ENST00000443443 METTL16Q86W50 562 aaKnown RBP7.6□□□□□ -1.19
VPS50-206ENST00000443443 ANKLE2Q86XL3 938 aa7.6□□□□□ -1.19
VPS50-206ENST00000443443 MAP6Q96JE9 813 aa7.6□□□□□ -1.19
VPS50-206ENST00000443443 G6PC3Q9BUM1 346 aa7.6□□□□□ -1.19
VPS50-206ENST00000443443 CDADC1Q9BWV3 514 aa7.6□□□□□ -1.19
VPS50-206ENST00000443443 YBX2Q9Y2T7 364 aaKnown RBP7.6□□□□□ -1.19
VPS50-206ENST00000443443 C1QTNF9P0C862 333 aa7.59□□□□□ -1.19
VPS50-206ENST00000443443 KIR2DL1P43626 348 aaPredicted RBP7.59□□□□□ -1.19
VPS50-206ENST00000443443 KIR2DL2P43627 348 aaPredicted RBP7.59□□□□□ -1.19
VPS50-206ENST00000443443 HDLBPQ00341 1268 aaKnown RBP7.59□□□□□ -1.19
VPS50-206ENST00000443443 COL9A2Q14055 689 aaPredicted RBP7.59□□□□□ -1.19
VPS50-206ENST00000443443 ZYXQ15942 572 aaKnown RBP7.59□□□□□ -1.19
VPS50-206ENST00000443443 BBS9Q3SYG4 887 aa7.59□□□□□ -1.19
VPS50-206ENST00000443443 DCAF15Q66K64 600 aa7.59□□□□□ -1.19
VPS50-206ENST00000443443 GPRASP2Q96D09 838 aa7.59□□□□□ -1.19
VPS50-206ENST00000443443 INTS4Q96HW7 963 aaKnown RBP7.59□□□□□ -1.19
VPS50-206ENST00000443443 SPATA32Q96LK8 384 aa7.59□□□□□ -1.19
VPS50-206ENST00000443443 EIF6P56537 245 aaKnown RBP7.58□□□□□ -1.2
VPS50-206ENST00000443443 RTP1P59025 263 aa7.58□□□□□ -1.2
VPS50-206ENST00000443443 CWF19L1Q69YN2 538 aaKnown RBP7.58□□□□□ -1.2
VPS50-206ENST00000443443 CRTC3Q6UUV7 619 aa7.58□□□□□ -1.2
VPS50-206ENST00000443443 LSRQ86X29 649 aaPredicted RBP7.58□□□□□ -1.2
VPS50-206ENST00000443443 TAB3Q8N5C8 712 aaPredicted RBP7.58□□□□□ -1.2
VPS50-206ENST00000443443 RBBP8NLQ8NC74 664 aaPredicted RBP7.58□□□□□ -1.2
VPS50-206ENST00000443443 CPLX3Q8WVH0 158 aa7.58□□□□□ -1.2
VPS50-206ENST00000443443 BRF1Q92994 677 aa7.58□□□□□ -1.2
VPS50-206ENST00000443443 HHIPL1Q96JK4 782 aa7.58□□□□□ -1.2
VPS50-206ENST00000443443 SLC26A8Q96RN1 970 aa7.58□□□□□ -1.2
VPS50-206ENST00000443443 UNCXA6NJT0 531 aa7.57□□□□□ -1.2
VPS50-206ENST00000443443 ETV2O00321 342 aaPredicted RBP7.57□□□□□ -1.2
VPS50-206ENST00000443443 TSPAN15O95858 294 aa7.57□□□□□ -1.2
VPS50-206ENST00000443443 VAV1P15498 845 aa7.57□□□□□ -1.2
VPS50-206ENST00000443443 BMP8BP34820 402 aa7.57□□□□□ -1.2
VPS50-206ENST00000443443 CTSKP43235 329 aa7.57□□□□□ -1.2
VPS50-206ENST00000443443 AXDND1Q5T1B0 1012 aaPredicted RBP7.57□□□□□ -1.2
VPS50-206ENST00000443443 ADGRF1Q5T601 910 aa7.57□□□□□ -1.2
VPS50-206ENST00000443443 ATG14Q6ZNE5 492 aa7.57□□□□□ -1.2
VPS50-206ENST00000443443 IRF2BP1Q8IU81 584 aa7.57□□□□□ -1.2
VPS50-206ENST00000443443 SMARCC1Q92922 1105 aaPredicted RBP7.57□□□□□ -1.2
VPS50-206ENST00000443443 TOX2Q96NM4 488 aa7.57□□□□□ -1.2
VPS50-206ENST00000443443 KIAA1522Q9P206 1035 aaPredicted RBP7.57□□□□□ -1.2
VPS50-206ENST00000443443 TNFRSF10DQ9UBN6 386 aa7.57□□□□□ -1.2
VPS50-206ENST00000443443 NRDCO43847 1150 aa7.56□□□□□ -1.2
VPS50-206ENST00000443443 GSNP06396 782 aa7.56□□□□□ -1.2
VPS50-206ENST00000443443 ENDOUP21128 410 aaKnown RBP7.56□□□□□ -1.2
VPS50-206ENST00000443443 PPP2R5EQ16537 467 aa7.56□□□□□ -1.2
VPS50-206ENST00000443443 PPFIBP1Q86W92 1011 aa7.56□□□□□ -1.2
VPS50-206ENST00000443443 SHISA4Q96DD7 197 aa7.56□□□□□ -1.2
VPS50-206ENST00000443443 AP5S1Q9NUS5 200 aa7.56□□□□□ -1.2
VPS50-206ENST00000443443 TCAF2A6NFQ2 919 aa7.55□□□□□ -1.2
VPS50-206ENST00000443443 NOTOA8MTQ0 251 aa7.55□□□□□ -1.2
VPS50-206ENST00000443443 NPIPB6E9PJ23 425 aa7.55□□□□□ -1.2
VPS50-206ENST00000443443 GSTM1P09488 218 aa7.55□□□□□ -1.2
VPS50-206ENST00000443443 NASPP49321 788 aaPredicted RBP7.55□□□□□ -1.2
VPS50-206ENST00000443443 TCEAL1Q15170 157 aa7.55□□□□□ -1.2
VPS50-206ENST00000443443 GNPTABQ3T906 1256 aa7.55□□□□□ -1.2
VPS50-206ENST00000443443 ANKRD39Q53RE8 183 aa7.55□□□□□ -1.2
VPS50-206ENST00000443443 NLRX1Q86UT6 975 aa7.55□□□□□ -1.2
VPS50-206ENST00000443443 NAT16Q8N8M0 369 aa7.55□□□□□ -1.2
VPS50-206ENST00000443443 RGS22Q8NE09 1264 aa7.55□□□□□ -1.2
VPS50-206ENST00000443443 FCRL2Q96LA5 508 aaPredicted RBP7.55□□□□□ -1.2
VPS50-206ENST00000443443 SRRTQ9BXP5 876 aaKnown RBP7.55□□□□□ -1.2
VPS50-206ENST00000443443 GP6Q9HCN6 339 aa7.55□□□□□ -1.2
VPS50-206ENST00000443443 PRR13Q9NZ81 148 aa7.55□□□□□ -1.2
VPS50-206ENST00000443443 OR14I1A6ND48 311 aa7.54□□□□□ -1.2
VPS50-206ENST00000443443 WTIPA6NIX2 430 aaPredicted RBP7.54□□□□□ -1.2
VPS50-206ENST00000443443 SHOXO15266 292 aa7.54□□□□□ -1.2
VPS50-206ENST00000443443 ZNF205O95201 554 aa7.54□□□□□ -1.2
VPS50-206ENST00000443443 CD247P20963 164 aa7.54□□□□□ -1.2
VPS50-206ENST00000443443 NOP2P46087 812 aaKnown RBP7.54□□□□□ -1.2
VPS50-206ENST00000443443 SOX9P48436 509 aa7.54□□□□□ -1.2
VPS50-206ENST00000443443 ZNF445P59923 1031 aa7.54□□□□□ -1.2
VPS50-206ENST00000443443 LCE4AQ5TA78 99 aa7.54□□□□□ -1.2
VPS50-206ENST00000443443 GALNT18Q6P9A2 607 aa7.54□□□□□ -1.2
VPS50-206ENST00000443443 ZSCAN18Q8TBC5 510 aaPredicted RBP7.54□□□□□ -1.2
VPS50-206ENST00000443443 ZNF214Q9UL59 606 aaPredicted RBP7.54□□□□□ -1.2
VPS50-206ENST00000443443 INPP5FQ9Y2H2 1132 aa7.54□□□□□ -1.2
VPS50-206ENST00000443443 ZNF451Q9Y4E5 1061 aa7.54□□□□□ -1.2
VPS50-206ENST00000443443 TAF6LQ9Y6J9 622 aa7.54□□□□□ -1.2
VPS50-206ENST00000443443 LTBP3Q9NS15 1303 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 A0A1W2PQ27 194 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 A0A1W2PQ64 194 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 A0A1W2PQC6 194 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 A0A1W2PQD8 194 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 FADS2P1A8MWK0 482 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 KRT1P04264 644 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 ITGA4P13612 1032 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 SDHBP21912 280 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 CFPP27918 469 aa7.53□□□□□ -1.2
VPS50-206ENST00000443443 ADAT2Q7Z6V5 191 aaKnown RBP7.53□□□□□ -1.2
VPS50-206ENST00000443443 LRRC56Q8IYG6 542 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms