RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 NMT2O60551 498 aa15.87■□□□□ 0.13
MCF2L-218ENST00000442625 NDUFA10O95299 355 aa15.87■□□□□ 0.13
MCF2L-218ENST00000442625 XBP1P17861 261 aa15.87■□□□□ 0.13
MCF2L-218ENST00000442625 PMS1P54277 932 aaKnown RBP15.87■□□□□ 0.13
MCF2L-218ENST00000442625 FUT2Q10981 343 aa15.87■□□□□ 0.13
MCF2L-218ENST00000442625 IL17AQ16552 155 aa15.87■□□□□ 0.13
MCF2L-218ENST00000442625 TCP11X2Q5H9J9 407 aa15.87■□□□□ 0.13
MCF2L-218ENST00000442625 TTC19Q6DKK2 380 aaPredicted RBP15.87■□□□□ 0.13
MCF2L-218ENST00000442625 MAGEB6P1A0A0J9YX57 407 aa15.86■□□□□ 0.13
MCF2L-218ENST00000442625 IVLP07476 585 aa15.86■□□□□ 0.13
MCF2L-218ENST00000442625 MCM7P33993 719 aa15.86■□□□□ 0.13
MCF2L-218ENST00000442625 KLK7P49862 253 aa15.86■□□□□ 0.13
MCF2L-218ENST00000442625 CHRNDQ07001 517 aa15.86■□□□□ 0.13
MCF2L-218ENST00000442625 CCDC148Q8NFR7 591 aa15.86■□□□□ 0.13
MCF2L-218ENST00000442625 GSDMAQ96QA5 445 aa15.86■□□□□ 0.13
MCF2L-218ENST00000442625 GGCXP38435 758 aa15.86■□□□□ 0.13
MCF2L-218ENST00000442625 HERVK_113P62684 666 aa15.86■□□□□ 0.13
MCF2L-218ENST00000442625 SLC4A8Q2Y0W8 1093 aa15.86■□□□□ 0.13
MCF2L-218ENST00000442625 TTC38Q5R3I4 469 aa15.86■□□□□ 0.13
MCF2L-218ENST00000442625 GNL3LQ9NVN8 582 aaKnown RBP15.86■□□□□ 0.13
MCF2L-218ENST00000442625 PDE2AO00408 941 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-218ENST00000442625 PRCPP42785 496 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 NPY5RQ15761 445 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 CCDC122Q5T0U0 273 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 PIK3AP1Q6ZUJ8 805 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 CATIPQ7Z7H3 387 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 LACRTQ9GZZ8 138 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 POLD4Q9HCU8 107 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 BTG4Q9NY30 223 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 HPCAL4Q9UM19 191 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 CHD4Q14839 1912 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 IGHMBP2P38935 993 aaKnown RBP15.85■□□□□ 0.13
MCF2L-218ENST00000442625 USP14P54578 494 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 CYP27A1Q02318 531 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 PAK1Q13153 545 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 TRAPPC11Q7Z392 1133 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 LIMA1Q9UHB6 759 aaKnown RBP15.85■□□□□ 0.13
MCF2L-218ENST00000442625 TIAM2Q8IVF5 1701 aa15.85■□□□□ 0.13
MCF2L-218ENST00000442625 RTL9Q8NET4 1388 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 C2orf54Q08AI8 447 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 EZH2Q15910 746 aaKnown RBP15.84■□□□□ 0.13
MCF2L-218ENST00000442625 IRF2BP1Q8IU81 584 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 RNF217Q8TC41 542 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 AFAP1L1Q8TED9 768 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 SMCR8Q8TEV9 937 aaPredicted RBP15.84■□□□□ 0.13
MCF2L-218ENST00000442625 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.84■□□□□ 0.13
MCF2L-218ENST00000442625 MYH3P11055 1940 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 MACROD2A1Z1Q3 448 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 ERVV-1B6SEH8 477 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 NKRFO15226 690 aaKnown RBP eCLIP15.84■□□□□ 0.13
MCF2L-218ENST00000442625 PRPF3O43395 683 aaKnown RBP15.84■□□□□ 0.13
MCF2L-218ENST00000442625 PRPF6O94906 941 aaKnown RBP15.84■□□□□ 0.13
MCF2L-218ENST00000442625 WDR59Q6PJI9 974 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 FERMT2Q96AC1 680 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 DRC1Q96MC2 740 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 PSMB7Q99436 277 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 AGPAT5Q9NUQ2 364 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 SMARCAL1Q9NZC9 954 aa15.84■□□□□ 0.13
MCF2L-218ENST00000442625 ZC3H4Q9UPT8 1303 aaKnown RBP15.83■□□□□ 0.13
MCF2L-218ENST00000442625 PP2D1A8MPX8 630 aa15.83■□□□□ 0.13
MCF2L-218ENST00000442625 FECHP22830 423 aa15.83■□□□□ 0.13
MCF2L-218ENST00000442625 TROAPQ12815 778 aa15.83■□□□□ 0.13
MCF2L-218ENST00000442625 DNAJC21Q5F1R6 531 aaKnown RBP15.83■□□□□ 0.13
MCF2L-218ENST00000442625 FAM47AQ5JRC9 791 aa15.83■□□□□ 0.13
MCF2L-218ENST00000442625 HDAC7Q8WUI4 952 aa15.83■□□□□ 0.13
MCF2L-218ENST00000442625 CCDC51Q96ER9 411 aa15.83■□□□□ 0.13
MCF2L-218ENST00000442625 GBP3Q9H0R5 595 aa15.83■□□□□ 0.13
MCF2L-218ENST00000442625 PARP1P09874 1014 aaKnown RBP15.83■□□□□ 0.12
MCF2L-218ENST00000442625 IL6STP40189 918 aaPredicted RBP15.83■□□□□ 0.12
MCF2L-218ENST00000442625 E2F4Q16254 413 aa15.83■□□□□ 0.12
MCF2L-218ENST00000442625 TTC31Q49AM3 519 aaPredicted RBP15.83■□□□□ 0.12
MCF2L-218ENST00000442625 WDR93Q6P2C0 686 aa15.83■□□□□ 0.12
MCF2L-218ENST00000442625 SRBD1Q8N5C6 995 aaKnown RBP15.83■□□□□ 0.12
MCF2L-218ENST00000442625 TNFRSF25Q93038 417 aa15.83■□□□□ 0.12
MCF2L-218ENST00000442625 SLAIN2Q9P270 581 aa15.83■□□□□ 0.12
MCF2L-218ENST00000442625 CEP83Q9Y592 693 aa15.83■□□□□ 0.12
MCF2L-218ENST00000442625 SAR1BQ9Y6B6 198 aa15.83■□□□□ 0.12
MCF2L-218ENST00000442625 ITIH6Q6UXX5 1313 aa15.83■□□□□ 0.12
MCF2L-218ENST00000442625 MAGEA9P43362 315 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 STIM1Q13586 685 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 GOLGA6L1Q8N7Z2 621 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 CAGE1Q8TC20 777 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 RIOK1Q9BRS2 568 aaKnown RBP15.82■□□□□ 0.12
MCF2L-218ENST00000442625 BRMS1Q9HCU9 246 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 BCL9O00512 1426 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 AGPSO00116 658 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 MATR3P43243 847 aaKnown RBP eCLIP15.82■□□□□ 0.124e-7■■■■□ 23.6
MCF2L-218ENST00000442625 RCAN1P53805 252 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 ATP2C1P98194 919 aaPredicted RBP15.82■□□□□ 0.12
MCF2L-218ENST00000442625 PPARDQ03181 441 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 CCDC152Q4G0S7 254 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 CTR9Q6PD62 1173 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 OTUD6BQ8N6M0 293 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 JAKMIP2Q96AA8 810 aa15.82■□□□□ 0.12
MCF2L-218ENST00000442625 RRP36Q96EU6 259 aaKnown RBP15.82■□□□□ 0.12
MCF2L-218ENST00000442625 NLRP5P59047 1200 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 KIAA1328Q86T90 577 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 IQCA1Q86XH1 822 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 RASGRP4Q8TDF6 673 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms