RNA–Protein interactions for RNA: ENST00000442419.1

SNHG11-210, Transcript of small nucleolar RNA host gene 11, human

TSL 3

Gene SNHG11, Length 741 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG11-210	ENST00000442419	FBXL16	Q8N461	479 aa		13.72	□□□□□ -0.21
SNHG11-210	ENST00000442419	C12orf42	Q96LP6	360 aa		13.72	□□□□□ -0.21
SNHG11-210	ENST00000442419	RNPC3	Q96LT9	517 aa	Known RBP	13.72	□□□□□ -0.21
SNHG11-210	ENST00000442419	JAKMIP1	Q96N16	626 aa	Known RBP	13.72	□□□□□ -0.21
SNHG11-210	ENST00000442419	TTC14	Q96N46	770 aa		13.72	□□□□□ -0.21
SNHG11-210	ENST00000442419	NEK1	Q96PY6	1258 aa		13.72	□□□□□ -0.21
SNHG11-210	ENST00000442419	EMILIN3	Q9NT22	766 aa		13.72	□□□□□ -0.21
SNHG11-210	ENST00000442419	ZBTB21	Q9ULJ3	1066 aa		13.72	□□□□□ -0.21
SNHG11-210	ENST00000442419	TRIM43B	A6NCK2	446 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	ST18	O60284	1047 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	CNMD	O75829	334 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	CYP2C19	P33261	490 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	USP5	P45974	858 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	NEK4	P51957	841 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	JAG1	P78504	1218 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	PPARA	Q07869	468 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	GRIN2C	Q14957	1233 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	OLFML2B	Q68BL8	750 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	LBX2	Q6XYB7	198 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	TRPV1	Q8NER1	839 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	TGFBRAP1	Q8WUH2	860 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	STAG1	Q8WVM7	1258 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	IPO9	Q96P70	1041 aa	Known RBP	13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	DNAJC18	Q9H819	358 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	RAPGEFL1	Q9UHV5	662 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	CYP46A1	Q9Y6A2	500 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	IVNS1ABP	Q9Y6Y0	642 aa		13.71	□□□□□ -0.21
SNHG11-210	ENST00000442419	LAMA4	Q16363	1823 aa		13.71	□□□□□ -0.22
SNHG11-210	ENST00000442419	RLF	Q13129	1914 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	FLT1	P17948	1338 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	WDR19	Q8NEZ3	1342 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	USP17L15	C9J2P7	530 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	USP17L13	C9JLJ4	530 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	USP17L12	C9JPN9	530 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	USP17L11	C9JVI0	530 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	USP17L21	D6R901	530 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	USP17L18	D6R9N7	530 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	USP17L22	D6RA61	530 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	USP17L17	D6RBQ6	530 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	USP17L19	D6RCP7	530 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	USP17L20	D6RJB6	530 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	CAST	P20810	708 aa	Known RBP	13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	RPS6KB1	P23443	525 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	DNAJB2	P25686	324 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	EXOSC10	Q01780	885 aa	Known RBP	13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	USP17L24	Q0WX57	530 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	BECN1	Q14457	450 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	AKNAD1	Q5T1N1	836 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	C12orf60	Q5U649	245 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	BLOC1S2	Q6QNY1	142 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	DHX32	Q7L7V1	743 aa	Known RBP	13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	TBC1D10C	Q8IV04	446 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	MTA3	Q9BTC8	594 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	RNF41	Q9H4P4	317 aa	Predicted RBP	13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	TACC3	Q9Y6A5	838 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	ROBO3	Q96MS0	1386 aa		13.7	□□□□□ -0.22
SNHG11-210	ENST00000442419	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	SEPT4	O43236	478 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	HAND2	P61296	217 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	WDR78	Q5VTH9	848 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	SH3RF1	Q7Z6J0	888 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	NCOA7	Q8NI08	942 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	NPLOC4	Q8TAT6	608 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	ASB2	Q96Q27	587 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	TRIM34	Q9BYJ4	488 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	AGXT2	Q9BYV1	514 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	CNNM2	Q9H8M5	875 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	MCM9	Q9NXL9	1143 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	THEG	Q9P2T0	379 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	PIEZO1	Q92508	2521 aa		13.69	□□□□□ -0.22
SNHG11-210	ENST00000442419	KIAA0355	O15063	1070 aa		13.68	□□□□□ -0.22
SNHG11-210	ENST00000442419	ORC4	O43929	436 aa		13.68	□□□□□ -0.22
SNHG11-210	ENST00000442419	GDF11	O95390	407 aa		13.68	□□□□□ -0.22
SNHG11-210	ENST00000442419	TLE2	Q04725	743 aa		13.68	□□□□□ -0.22
SNHG11-210	ENST00000442419	CATSPERG	Q6ZRH7	1159 aa		13.68	□□□□□ -0.22
SNHG11-210	ENST00000442419	MFSD6	Q6ZSS7	791 aa		13.68	□□□□□ -0.22
SNHG11-210	ENST00000442419	AMOTL1	Q8IY63	956 aa		13.68	□□□□□ -0.22
SNHG11-210	ENST00000442419	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.68	□□□□□ -0.22
SNHG11-210	ENST00000442419	UPF3B	Q9BZI7	483 aa	Known RBP	13.68	□□□□□ -0.22
SNHG11-210	ENST00000442419	KRT23	Q9C075	422 aa		13.68	□□□□□ -0.22
SNHG11-210	ENST00000442419	ZNF576	Q9H609	170 aa		13.68	□□□□□ -0.22
SNHG11-210	ENST00000442419	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
SNHG11-210	ENST00000442419	FOCAD	Q5VW36	1801 aa		13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	MINDY4B	A8MYZ0	360 aa		13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	STRN	O43815	780 aa		13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	CD2BP2	O95400	341 aa	Known RBP	13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	SLC3A2	P08195	630 aa	Known RBP	13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	CLTB	P09497	229 aa		13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	ADCYAP1R1	P41586	468 aa		13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	USP14	P54578	494 aa		13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	EPHB4	P54760	987 aa		13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	TRDN	Q13061	729 aa		13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	ANKRD1	Q15327	319 aa		13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	LRRC41	Q15345	812 aa		13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.67	□□□□□ -0.22
SNHG11-210	ENST00000442419	MAPKAPK5	Q8IW41	473 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms