RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 BRMS1Q9HCU9 246 aa9.28□□□□□ -0.92
CCDC39-201ENST00000442201 ADARB2Q9NS39 739 aaKnown RBP9.28□□□□□ -0.92
CCDC39-201ENST00000442201 GGA3Q9NZ52 723 aa9.28□□□□□ -0.92
CCDC39-201ENST00000442201 SYNPO2Q9UMS6 1093 aa9.28□□□□□ -0.92
CCDC39-201ENST00000442201 ASNSP08243 561 aa9.27□□□□□ -0.92
CCDC39-201ENST00000442201 SLFN13Q68D06 897 aa9.27□□□□□ -0.92
CCDC39-201ENST00000442201 NOSTRINQ8IVI9 506 aa9.27□□□□□ -0.92
CCDC39-201ENST00000442201 PHF20Q9BVI0 1012 aa9.27□□□□□ -0.92
CCDC39-201ENST00000442201 UBA5Q9GZZ9 404 aa9.27□□□□□ -0.92
CCDC39-201ENST00000442201 TSPYL1Q9H0U9 437 aa9.27□□□□□ -0.92
CCDC39-201ENST00000442201 CPVLQ9H3G5 476 aa9.27□□□□□ -0.92
CCDC39-201ENST00000442201 GPCPD1Q9NPB8 672 aa9.27□□□□□ -0.92
CCDC39-201ENST00000442201 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.27□□□□□ -0.92
CCDC39-201ENST00000442201 SEC63Q9UGP8 760 aaKnown RBP9.27□□□□□ -0.92
CCDC39-201ENST00000442201 SRCAPQ6ZRS2 3230 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 F5H6K3 240 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 GADD45BO75293 160 aaPredicted RBP9.27□□□□□ -0.93
CCDC39-201ENST00000442201 SLC1A4P43007 532 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 HIRAP54198 1017 aaPredicted RBP9.27□□□□□ -0.93
CCDC39-201ENST00000442201 CEBPZQ03701 1054 aaKnown RBP9.27□□□□□ -0.93
CCDC39-201ENST00000442201 KLRC3Q07444 240 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 DCAF15Q66K64 600 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 HOMER1Q86YM7 354 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 ZNF710Q8N1W2 664 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 DCAF4Q8WV16 495 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 RIOX1Q9H6W3 641 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 VAT1LQ9HCJ6 419 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 SH3GLB2Q9NR46 395 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 GOLGA6L4A6NEF3 574 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 CALML3P27482 149 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 KRT2P35908 639 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 NLRP5P59047 1200 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 NBPF12Q5TAG4 269 aaPredicted RBP9.27□□□□□ -0.93
CCDC39-201ENST00000442201 GMCL1P1Q8NEA9 526 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 GPT2Q8TD30 523 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 RCOR1Q9UKL0 485 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 PPP2R3BQ9Y5P8 575 aa9.27□□□□□ -0.93
CCDC39-201ENST00000442201 VEGFAP15692 232 aaPredicted RBP9.26□□□□□ -0.93
CCDC39-201ENST00000442201 HEATR3Q7Z4Q2 680 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 FAM177A1Q8N128 213 aaPredicted RBP9.26□□□□□ -0.93
CCDC39-201ENST00000442201 CCDC148Q8NFR7 591 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 MYRIPQ8NFW9 859 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 SHISA4Q96DD7 197 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 GZF1Q9H116 711 aaPredicted RBP9.26□□□□□ -0.93
CCDC39-201ENST00000442201 SH2D4AQ9H788 454 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 RTEL1Q9NZ71 1219 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 NDUFB10O96000 172 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 NR5A1Q13285 461 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 KCTD1Q719H9 257 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 CEP120Q8N960 986 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 CCDC12Q8WUD4 166 aaPredicted RBP9.26□□□□□ -0.93
CCDC39-201ENST00000442201 GPKOWQ92917 476 aaPredicted RBP eCLIP9.26□□□□□ -0.93
CCDC39-201ENST00000442201 GMCL1Q96IK5 515 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 PIGSQ96S52 555 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 FTOQ9C0B1 505 aaKnown RBP eCLIP9.26□□□□□ -0.93
CCDC39-201ENST00000442201 GINM1Q9NU53 330 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 POLR3EQ9NVU0 708 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 BARHL2Q9NY43 387 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 TMX2Q9Y320 296 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 PITPNM2Q9BZ72 1349 aa9.26□□□□□ -0.93
CCDC39-201ENST00000442201 ZC3H4Q9UPT8 1303 aaKnown RBP9.26□□□□□ -0.93
CCDC39-201ENST00000442201 MYH8P13535 1937 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 GREB1LQ9C091 1923 aaPredicted RBP9.25□□□□□ -0.93
CCDC39-201ENST00000442201 A0A1W2PRG0 241 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 PHF20L1A8MW92 1017 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 YEATS4O95619 227 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 WWC2Q6AWC2 1192 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 GAS2L3Q86XJ1 694 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 OXER1Q8TDS5 423 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 EFCC1Q9HA90 598 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 DICER1Q9UPY3 1922 aaKnown RBP9.25□□□□□ -0.93
CCDC39-201ENST00000442201 CTNND1O60716 968 aaKnown RBP9.25□□□□□ -0.93
CCDC39-201ENST00000442201 CBX1P83916 185 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 GABPB1Q06547 395 aaPredicted RBP9.25□□□□□ -0.93
CCDC39-201ENST00000442201 STK38Q15208 465 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 TPRNQ4KMQ1 711 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 RILPL1Q5EBL4 403 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 ANO1Q5XXA6 986 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 TTBK2Q6IQ55 1244 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 CAVIN1Q6NZI2 390 aaKnown RBP9.25□□□□□ -0.93
CCDC39-201ENST00000442201 ACER1Q8TDN7 264 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 L3MBTL3Q96JM7 780 aaPredicted RBP9.25□□□□□ -0.93
CCDC39-201ENST00000442201 ZNF341Q9BYN7 854 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 GOPCQ9HD26 462 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 hCG_1984214I3L0E3 225 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 ECE1P42892 770 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 NASPP49321 788 aaPredicted RBP9.25□□□□□ -0.93
CCDC39-201ENST00000442201 SF3A1Q15459 793 aaKnown RBP9.25□□□□□ -0.93
CCDC39-201ENST00000442201 SUPT20HL1Q3ZLR7 823 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 GALNT17Q6IS24 598 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 ADGRF4Q8IZF3 695 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 ZNF713Q8N859 430 aaPredicted RBP9.25□□□□□ -0.93
CCDC39-201ENST00000442201 KCNG4Q8TDN1 519 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 DCPSQ96C86 337 aaKnown RBP9.25□□□□□ -0.93
CCDC39-201ENST00000442201 JMJD4Q9H9V9 463 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 CLIC4Q9Y696 253 aa9.25□□□□□ -0.93
CCDC39-201ENST00000442201 SBF1O95248 1867 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 STXBP3O00186 592 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 BMP3P12645 472 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 CAPN2P17655 700 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms