RNA–Protein interactions for RNA: ENST00000441549.7

PDPK1-204, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-204ENST00000441549 ATP2C1P98194 919 aaPredicted RBP27.47■■□□□ 1.99
PDPK1-204ENST00000441549 ATP2B2Q01814 1243 aa27.47■■□□□ 1.99
PDPK1-204ENST00000441549 ZNF174Q15697 407 aa27.47■■□□□ 1.99
PDPK1-204ENST00000441549 CCDC194A0A1B0GVG4 234 aa27.47■■□□□ 1.99
PDPK1-204ENST00000441549 ADAMTS3O15072 1205 aa27.47■■□□□ 1.99
PDPK1-204ENST00000441549 DCAF4Q8WV16 495 aa27.47■■□□□ 1.99
PDPK1-204ENST00000441549 ZBED3Q96IU2 234 aaPredicted RBP27.47■■□□□ 1.99
PDPK1-204ENST00000441549 CBX8Q9HC52 389 aa27.47■■□□□ 1.99
PDPK1-204ENST00000441549 GPCPD1Q9NPB8 672 aa27.47■■□□□ 1.99
PDPK1-204ENST00000441549 CLRN2A0PK11 232 aa27.46■■□□□ 1.99
PDPK1-204ENST00000441549 ZNF165P49910 485 aa27.46■■□□□ 1.99
PDPK1-204ENST00000441549 GRIN1Q05586 938 aa27.46■■□□□ 1.99
PDPK1-204ENST00000441549 RBM26Q5T8P6 1007 aaKnown RBP27.46■■□□□ 1.99
PDPK1-204ENST00000441549 DNAJC25Q9H1X3 360 aa27.46■■□□□ 1.99
PDPK1-204ENST00000441549 SMCO2A6NFE2 343 aa27.45■■□□□ 1.99
PDPK1-204ENST00000441549 WNT7AO00755 349 aa27.45■■□□□ 1.99
PDPK1-204ENST00000441549 MYO1BO43795 1136 aa27.45■■□□□ 1.99
PDPK1-204ENST00000441549 ICA1Q05084 483 aa27.45■■□□□ 1.99
PDPK1-204ENST00000441549 SEPT2Q15019 361 aa27.45■■□□□ 1.99
PDPK1-204ENST00000441549 FAM83AQ86UY5 434 aa27.45■■□□□ 1.99
PDPK1-204ENST00000441549 CSRNP2Q9H175 543 aa27.45■■□□□ 1.99
PDPK1-204ENST00000441549 SYNPO2Q9UMS6 1093 aa27.45■■□□□ 1.99
PDPK1-204ENST00000441549 PTGDRQ13258 359 aa27.44■■□□□ 1.98
PDPK1-204ENST00000441549 KRBA2Q6ZNG9 492 aa27.44■■□□□ 1.98
PDPK1-204ENST00000441549 KRT25Q7Z3Z0 450 aa27.44■■□□□ 1.98
PDPK1-204ENST00000441549 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.44■■□□□ 1.983e-7■■■■□ 20.8
PDPK1-204ENST00000441549 USP25Q9UHP3 1055 aa27.44■■□□□ 1.98
PDPK1-204ENST00000441549 BCS1LQ9Y276 419 aa27.44■■□□□ 1.98
PDPK1-204ENST00000441549 CNTNAP1P78357 1384 aa27.44■■□□□ 1.98
PDPK1-204ENST00000441549 PNMA6FA0A0J9YX94 578 aa27.44■■□□□ 1.98
PDPK1-204ENST00000441549 RPS12P25398 132 aaKnown RBP27.44■■□□□ 1.98
PDPK1-204ENST00000441549 CCDC96Q2M329 555 aa27.44■■□□□ 1.98
PDPK1-204ENST00000441549 HS1BP3Q53T59 392 aa27.44■■□□□ 1.98
PDPK1-204ENST00000441549 PPP1R18Q6NYC8 613 aa27.44■■□□□ 1.98
PDPK1-204ENST00000441549 ADGRF4Q8IZF3 695 aa27.44■■□□□ 1.98
PDPK1-204ENST00000441549 JMJD4Q9H9V9 463 aa27.44■■□□□ 1.98
PDPK1-204ENST00000441549 PTGER2P43116 358 aa27.43■■□□□ 1.98
PDPK1-204ENST00000441549 ZRSR1Q15695 479 aaKnown RBP27.43■■□□□ 1.98
PDPK1-204ENST00000441549 SPECC1Q5M775 1068 aa27.43■■□□□ 1.98
PDPK1-204ENST00000441549 ARL6IP4Q66PJ3 421 aaKnown RBP27.43■■□□□ 1.98
PDPK1-204ENST00000441549 SIAH1Q8IUQ4 282 aa27.43■■□□□ 1.98
PDPK1-204ENST00000441549 CNNM3Q8NE01 707 aa27.43■■□□□ 1.98
PDPK1-204ENST00000441549 GMCL1P1Q8NEA9 526 aa27.43■■□□□ 1.98
PDPK1-204ENST00000441549 HOOK1Q9UJC3 728 aaKnown RBP27.43■■□□□ 1.98
PDPK1-204ENST00000441549 GDF11O95390 407 aa27.42■■□□□ 1.98
PDPK1-204ENST00000441549 LONRF3Q496Y0 759 aa27.42■■□□□ 1.98
PDPK1-204ENST00000441549 SLFN13Q68D06 897 aa27.42■■□□□ 1.98
PDPK1-204ENST00000441549 LUZP1Q86V48 1076 aa27.42■■□□□ 1.98
PDPK1-204ENST00000441549 RASGRP4Q8TDF6 673 aa27.42■■□□□ 1.98
PDPK1-204ENST00000441549 UPF1Q92900 1129 aaKnown RBP eCLIP27.42■■□□□ 1.98
PDPK1-204ENST00000441549 MTMR8Q96EF0 704 aa27.42■■□□□ 1.98
PDPK1-204ENST00000441549 TBC1D12O60347 775 aa27.41■■□□□ 1.98
PDPK1-204ENST00000441549 SHROOM1Q2M3G4 852 aaPredicted RBP27.41■■□□□ 1.98
PDPK1-204ENST00000441549 NAT10Q9H0A0 1025 aaKnown RBP27.41■■□□□ 1.98
PDPK1-204ENST00000441549 TUBE1Q9UJT0 475 aa27.41■■□□□ 1.98
PDPK1-204ENST00000441549 MCM7P33993 719 aa27.41■■□□□ 1.98
PDPK1-204ENST00000441549 SLC1A4P43007 532 aa27.41■■□□□ 1.98
PDPK1-204ENST00000441549 TTBK2Q6IQ55 1244 aa27.41■■□□□ 1.98
PDPK1-204ENST00000441549 VEZTQ9HBM0 779 aa27.41■■□□□ 1.98
PDPK1-204ENST00000441549 MYOZ2Q9NPC6 264 aa27.41■■□□□ 1.98
PDPK1-204ENST00000441549 GH2P01242 217 aa27.4■■□□□ 1.98
PDPK1-204ENST00000441549 ZNF280AP59817 542 aaPredicted RBP27.4■■□□□ 1.98
PDPK1-204ENST00000441549 KANK3Q6NY19 840 aa27.4■■□□□ 1.98
PDPK1-204ENST00000441549 C11orf57Q6ZUT1 292 aaPredicted RBP27.4■■□□□ 1.98
PDPK1-204ENST00000441549 CEP57L1Q8IYX8 460 aa27.4■■□□□ 1.98
PDPK1-204ENST00000441549 ERCC4Q92889 916 aaPredicted RBP27.4■■□□□ 1.98
PDPK1-204ENST00000441549 GMCL1Q96IK5 515 aa27.4■■□□□ 1.98
PDPK1-204ENST00000441549 WNT10BO00744 389 aa27.39■■□□□ 1.98
PDPK1-204ENST00000441549 ZBTB5O15062 677 aa27.39■■□□□ 1.98
PDPK1-204ENST00000441549 ADCY5O95622 1261 aa27.39■■□□□ 1.98
PDPK1-204ENST00000441549 IQCB1Q15051 598 aa27.39■■□□□ 1.98
PDPK1-204ENST00000441549 NONOQ15233 471 aaKnown RBP eCLIP27.39■■□□□ 1.982e-7■■■■■ 30.6
PDPK1-204ENST00000441549 KCTD1Q719H9 257 aa27.39■■□□□ 1.98
PDPK1-204ENST00000441549 C4orf32Q8N8J7 132 aa27.39■■□□□ 1.98
PDPK1-204ENST00000441549 POLR2DO15514 142 aaKnown RBP27.38■■□□□ 1.97
PDPK1-204ENST00000441549 NLRP12P59046 1061 aa27.38■■□□□ 1.97
PDPK1-204ENST00000441549 RRP1BQ14684 758 aaKnown RBP27.38■■□□□ 1.97
PDPK1-204ENST00000441549 F5H6K3 240 aa27.38■■□□□ 1.97
PDPK1-204ENST00000441549 LAD1O00515 517 aa27.38■■□□□ 1.97
PDPK1-204ENST00000441549 KLRC3Q07444 240 aa27.38■■□□□ 1.97
PDPK1-204ENST00000441549 INF2Q27J81 1249 aa27.38■■□□□ 1.97
PDPK1-204ENST00000441549 REXO1Q8N1G1 1221 aaKnown RBP27.38■■□□□ 1.97
PDPK1-204ENST00000441549 CCDC34Q96HJ3 373 aa27.38■■□□□ 1.97
PDPK1-204ENST00000441549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.37■■□□□ 1.97
PDPK1-204ENST00000441549 TNNI2P48788 182 aa27.37■■□□□ 1.97
PDPK1-204ENST00000441549 ADCY7P51828 1080 aa27.37■■□□□ 1.97
PDPK1-204ENST00000441549 JAG1P78504 1218 aa27.37■■□□□ 1.97
PDPK1-204ENST00000441549 MDM2Q00987 491 aaPredicted RBP27.37■■□□□ 1.97
PDPK1-204ENST00000441549 ORC2Q13416 577 aaPredicted RBP27.37■■□□□ 1.97
PDPK1-204ENST00000441549 BPIFA3Q9BQP9 254 aa27.37■■□□□ 1.97
PDPK1-204ENST00000441549 VWA3AA6NCI4 1184 aa27.36■■□□□ 1.97
PDPK1-204ENST00000441549 SLC16A2P36021 539 aa27.36■■□□□ 1.97
PDPK1-204ENST00000441549 USP49Q70CQ1 688 aa27.36■■□□□ 1.97
PDPK1-204ENST00000441549 SYMPKQ92797 1274 aaKnown RBP27.36■■□□□ 1.97
PDPK1-204ENST00000441549 COA7Q96BR5 231 aa27.36■■□□□ 1.97
PDPK1-204ENST00000441549 PYM1Q9BRP8 204 aaKnown RBP27.36■■□□□ 1.97
PDPK1-204ENST00000441549 PSDA5PKW4 1024 aaPredicted RBP27.36■■□□□ 1.97
PDPK1-204ENST00000441549 USP17L10C9JJH3 530 aa27.36■■□□□ 1.97
PDPK1-204ENST00000441549 LONP1P36776 959 aaKnown RBP27.36■■□□□ 1.97
PDPK1-204ENST00000441549 MAP3K10Q02779 954 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms