RNA–Protein interactions for RNA: ENST00000441448.6

RPF2-203, Transcript of ribosome production factor 2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF2, Length 1,531 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-203ENST00000441448 USP17L22D6RA61 530 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 USP17L17D6RBQ6 530 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 USP17L19D6RCP7 530 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 USP17L20D6RJB6 530 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 PDHXO00330 501 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 KIF5BP33176 963 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 MCM2P49736 904 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 USP17L24Q0WX57 530 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 NOGQ13253 232 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 CATSPERGQ6ZRH7 1159 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 TMTC3Q6ZXV5 915 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 GTF3C6Q969F1 213 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 SNX21Q969T3 373 aa13.04□□□□□ -0.32
RPF2-203ENST00000441448 ZSCAN31Q96LW9 406 aaPredicted RBP13.04□□□□□ -0.32
RPF2-203ENST00000441448 TESPA1A2RU30 521 aaPredicted RBP13.03□□□□□ -0.32
RPF2-203ENST00000441448 K7ELQ4 463 aaPredicted RBP13.03□□□□□ -0.32
RPF2-203ENST00000441448 DHX16O60231 1041 aaKnown RBP13.03□□□□□ -0.32
RPF2-203ENST00000441448 PEX10O60683 326 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 CYP2C8P10632 490 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 STAT2P52630 851 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 RCAN1P53805 252 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 IRX3P78415 501 aaPredicted RBP13.03□□□□□ -0.32
RPF2-203ENST00000441448 GPATCH4Q5T3I0 446 aaKnown RBP13.03□□□□□ -0.32
RPF2-203ENST00000441448 SYDE2Q5VT97 1194 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 PHKBQ93100 1093 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 ATG4CQ96DT6 458 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 MAP3K14Q99558 947 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 ASCC2Q9H1I8 757 aaPredicted RBP13.03□□□□□ -0.32
RPF2-203ENST00000441448 SH2B1Q9NRF2 756 aaPredicted RBP13.03□□□□□ -0.32
RPF2-203ENST00000441448 RBM28Q9NW13 759 aaKnown RBP13.03□□□□□ -0.32
RPF2-203ENST00000441448 FEM1BQ9UK73 627 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 NID2Q14112 1375 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 MYH6P13533 1939 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 SMCHD1A6NHR9 2005 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 CPLX1O14810 134 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 CYTH3O43739 400 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 JAK2O60674 1132 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 CTDNEP1O95476 244 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 TAL1P17542 331 aaPredicted RBP13.03□□□□□ -0.32
RPF2-203ENST00000441448 ANKRD23Q86SG2 305 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 HOMER1Q86YM7 354 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 IFNL1Q8IU54 200 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 ADGRF4Q8IZF3 695 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 P2RX7Q99572 595 aaKnown RBP13.03□□□□□ -0.32
RPF2-203ENST00000441448 SLF1Q9BQI6 1058 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 PRR12Q9ULL5 1215 aa13.03□□□□□ -0.32
RPF2-203ENST00000441448 COL11A1P12107 1806 aaPredicted RBP13.03□□□□□ -0.32
RPF2-203ENST00000441448 CCDC196A0A1B0GTZ2 297 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 SPDYE16A6NNV3 312 aaPredicted RBP13.02□□□□□ -0.33
RPF2-203ENST00000441448 HOXA7P31268 230 aaPredicted RBP13.02□□□□□ -0.33
RPF2-203ENST00000441448 SLC4A3P48751 1232 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 GNAQP50148 359 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 FUT2Q10981 343 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 SREBF2Q12772 1141 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 NTRK3Q16288 839 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 POTEEQ6S8J3 1075 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 BTNL9Q6UXG8 535 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 FAM160B2Q86V87 743 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 CHURC1Q8WUH1 139 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 JMJD4Q9H9V9 463 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 PPP1R9AQ9ULJ8 1098 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 CNTNAP5Q8WYK1 1306 aa13.02□□□□□ -0.33
RPF2-203ENST00000441448 OSBPP22059 807 aa13.01□□□□□ -0.33
RPF2-203ENST00000441448 ANP32AP39687 249 aaKnown RBP13.01□□□□□ -0.33
RPF2-203ENST00000441448 PABPC4Q13310 644 aaKnown RBP eCLIP13.01□□□□□ -0.33
RPF2-203ENST00000441448 COG2Q14746 738 aa13.01□□□□□ -0.33
RPF2-203ENST00000441448 CCDC174Q6PII3 467 aa13.01□□□□□ -0.33
RPF2-203ENST00000441448 NSUN7Q8NE18 718 aaKnown RBP13.01□□□□□ -0.33
RPF2-203ENST00000441448 IL27Q8NEV9 243 aa13.01□□□□□ -0.33
RPF2-203ENST00000441448 DDX11Q96FC9 970 aa13.01□□□□□ -0.33
RPF2-203ENST00000441448 PIGSQ96S52 555 aa13.01□□□□□ -0.33
RPF2-203ENST00000441448 SLC26A6Q9BXS9 759 aa13.01□□□□□ -0.33
RPF2-203ENST00000441448 PTPDC1A2A3K4 754 aa13□□□□□ -0.33
RPF2-203ENST00000441448 TM4SF4P48230 202 aa13□□□□□ -0.33
RPF2-203ENST00000441448 INHBEP58166 350 aa13□□□□□ -0.33
RPF2-203ENST00000441448 HERVK_113P62684 666 aa13□□□□□ -0.33
RPF2-203ENST00000441448 TAF1CQ15572 869 aaPredicted RBP13□□□□□ -0.33
RPF2-203ENST00000441448 CDC37Q16543 378 aaPredicted RBP13□□□□□ -0.33
RPF2-203ENST00000441448 PRPF38AQ8NAV1 312 aaKnown RBP13□□□□□ -0.33
RPF2-203ENST00000441448 LZTS2Q9BRK4 669 aa13□□□□□ -0.33
RPF2-203ENST00000441448 PAGR1Q9BTK6 254 aa13□□□□□ -0.33
RPF2-203ENST00000441448 SPZ1Q9BXG8 430 aa13□□□□□ -0.33
RPF2-203ENST00000441448 RIOX1Q9H6W3 641 aa13□□□□□ -0.33
RPF2-203ENST00000441448 V9GY48 417 aaPredicted RBP13□□□□□ -0.33
RPF2-203ENST00000441448 CEP350Q5VT06 3117 aa13□□□□□ -0.33
RPF2-203ENST00000441448 PCNTO95613 3336 aa12.99□□□□□ -0.33
RPF2-203ENST00000441448 VWA5AO00534 786 aa12.99□□□□□ -0.33
RPF2-203ENST00000441448 PLA2G6O60733 806 aa12.99□□□□□ -0.33
RPF2-203ENST00000441448 IFNAR1P17181 557 aa12.99□□□□□ -0.33
RPF2-203ENST00000441448 FOSBP53539 338 aa12.99□□□□□ -0.33
RPF2-203ENST00000441448 SSRP1Q08945 709 aaKnown RBP12.99□□□□□ -0.33
RPF2-203ENST00000441448 CUL4AQ13619 759 aa12.99□□□□□ -0.33
RPF2-203ENST00000441448 PPP2R5BQ15173 497 aa12.99□□□□□ -0.33
RPF2-203ENST00000441448 QRICH1Q2TAL8 776 aa12.99□□□□□ -0.33
RPF2-203ENST00000441448 CPLX2Q6PUV4 134 aaKnown RBP12.99□□□□□ -0.33
RPF2-203ENST00000441448 CPXCR1Q8N123 301 aa12.99□□□□□ -0.33
RPF2-203ENST00000441448 SMCR8Q8TEV9 937 aaPredicted RBP12.99□□□□□ -0.33
RPF2-203ENST00000441448 RAVER2Q9HCJ3 691 aaKnown RBP12.99□□□□□ -0.33
RPF2-203ENST00000441448 HOXC10Q9NYD6 342 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms