RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
AP004290.1-201ENST00000440915 C12orf42Q96LP6 360 aa11.92□□□□□ -0.5
AP004290.1-201ENST00000440915 ALG1Q9BT22 464 aa11.92□□□□□ -0.5
AP004290.1-201ENST00000440915 VAT1LQ9HCJ6 419 aa11.92□□□□□ -0.5
AP004290.1-201ENST00000440915 IRF6O14896 467 aa11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 STX6O43752 255 aa11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 PLA2G6O60733 806 aa11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 TOMM70O94826 608 aa11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 FOSBP53539 338 aa11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 HMGCS2P54868 508 aa11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 NUCB2P80303 420 aa11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 IKQ13123 557 aaPredicted RBP11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 PFKFB3Q16875 520 aaPredicted RBP11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 SYDE2Q5VT97 1194 aa11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 RRP36Q96EU6 259 aaKnown RBP11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 PIGSQ96S52 555 aa11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 JMJD4Q9H9V9 463 aa11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 TMOD4Q9NZQ9 345 aa11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 RBM27Q9P2N5 1060 aaKnown RBP11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 FEM1BQ9UK73 627 aa11.91□□□□□ -0.5
AP004290.1-201ENST00000440915 CXCL11O14625 94 aa11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 PDIA4P13667 645 aaKnown RBP11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 VCAM1P19320 739 aa11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 GJA5P36382 358 aa11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 STAT2P52630 851 aa11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 FAM160B2Q86V87 743 aa11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 HOMER1Q86YM7 354 aa11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 CHURC1Q8WUH1 139 aa11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 MTMR8Q96EF0 704 aa11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 C8orf76Q96K31 380 aa11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 RPAP3Q9H6T3 665 aaPredicted RBP11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 KCNH4Q9UQ05 1017 aa11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 MTMR6Q9Y217 621 aa11.9□□□□□ -0.5
AP004290.1-201ENST00000440915 A0A0G2JLL6 359 aaPredicted RBP11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 VPS37CA5D8V6 355 aaPredicted RBP11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 H3BQV1 296 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 BRD1O95696 1058 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 SCG2P13521 617 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 HUNKP57058 714 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 GUCY1B3Q02153 619 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 IFFO2Q5TF58 517 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 OTUD7BQ6GQQ9 843 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 PRRT2Q7Z6L0 340 aaPredicted RBP11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 ZNF784Q8NCA9 323 aaPredicted RBP11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 RGS22Q8NE09 1264 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 FBXO18Q8NFZ0 1043 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 WNK4Q96J92 1243 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 GJB4Q9NTQ9 266 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 SEC63Q9UGP8 760 aaKnown RBP11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 PRR12Q9ULL5 1215 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 ZDHHC9Q9Y397 364 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 WDR33Q9C0J8 1336 aaKnown RBP11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 MYH6P13533 1939 aa11.89□□□□□ -0.51
AP004290.1-201ENST00000440915 PNMA6FA0A0J9YX94 578 aa11.88□□□□□ -0.51
AP004290.1-201ENST00000440915 ZBTB5O15062 677 aa11.88□□□□□ -0.51
AP004290.1-201ENST00000440915 ZSCAN22P10073 491 aaPredicted RBP11.88□□□□□ -0.51
AP004290.1-201ENST00000440915 TRIM29Q14134 588 aa11.88□□□□□ -0.51
AP004290.1-201ENST00000440915 FOXD4L5Q5VV16 416 aaPredicted RBP11.88□□□□□ -0.51
AP004290.1-201ENST00000440915 KRT40Q6A162 431 aa11.88□□□□□ -0.51
AP004290.1-201ENST00000440915 PROCA1Q8NCQ7 364 aaPredicted RBP11.88□□□□□ -0.51
AP004290.1-201ENST00000440915 FOXD4L4Q8WXT5 416 aaPredicted RBP11.88□□□□□ -0.51
AP004290.1-201ENST00000440915 KIFC2Q96AC6 838 aa11.88□□□□□ -0.51
AP004290.1-201ENST00000440915 SHISA4Q96DD7 197 aa11.88□□□□□ -0.51
AP004290.1-201ENST00000440915 TANGO6Q9C0B7 1094 aa11.88□□□□□ -0.51
AP004290.1-201ENST00000440915 FBXO28Q9NVF7 368 aa11.88□□□□□ -0.51
AP004290.1-201ENST00000440915 USP17L15C9J2P7 530 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 USP17L13C9JLJ4 530 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 USP17L11C9JVI0 530 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 USP17L18D6R9N7 530 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 USP17L22D6RA61 530 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 USP17L17D6RBQ6 530 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 USP17L19D6RCP7 530 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 USP17L20D6RJB6 530 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 STXBP3O00186 592 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 XBP1P17861 261 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 SNAP25P60880 206 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 USP17L24Q0WX57 530 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 FSTL1Q12841 308 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 CDC37Q16543 378 aaPredicted RBP11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 QRICH1Q2TAL8 776 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 WWC2Q6AWC2 1192 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 GADL1Q6ZQY3 521 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 CATSPERGQ6ZRH7 1159 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 HEATR3Q7Z4Q2 680 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 SAPCD2Q86UD0 394 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 PRPF38AQ8NAV1 312 aaKnown RBP11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 GPKOWQ92917 476 aaPredicted RBP eCLIP11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 SLF1Q9BQI6 1058 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 SH3GLB2Q9NR46 395 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 VPS54Q9P1Q0 977 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 LOC285556D6RIA3 1793 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 PTPRFP10586 1907 aa11.87□□□□□ -0.51
AP004290.1-201ENST00000440915 hCG_1984214I3L0E3 225 aa11.86□□□□□ -0.51
AP004290.1-201ENST00000440915 PPP1R11O60927 126 aaPredicted RBP11.86□□□□□ -0.51
AP004290.1-201ENST00000440915 FLOT1O75955 427 aa11.86□□□□□ -0.51
AP004290.1-201ENST00000440915 SNAPC2Q13487 334 aa11.86□□□□□ -0.51
AP004290.1-201ENST00000440915 MOGSQ13724 837 aa11.86□□□□□ -0.51
AP004290.1-201ENST00000440915 TREML2Q5T2D2 321 aa11.86□□□□□ -0.51
AP004290.1-201ENST00000440915 SPRYD7Q5W111 196 aa11.86□□□□□ -0.51
AP004290.1-201ENST00000440915 ZNF713Q8N859 430 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms