RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 RETREG2Q8NC44 543 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 IQCDQ96DY2 449 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 DBNDD2Q9BQY9 259 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 FOXP1Q9H334 677 aaPredicted RBP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 AATFQ9NY61 560 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 HEG1Q9ULI3 1381 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 ERICH2A1L162 156 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 BTBD11A6QL63 1104 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 ATP6V1G2O95670 118 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 NEFHP12036 1026 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 CD44P16070 742 aaKnown RBP15.28■□□□□ 0.04
LINC02048-201ENST00000440556 PECAM1P16284 738 aaPredicted RBP15.28■□□□□ 0.04
LINC02048-201ENST00000440556 RFX5P48382 616 aaPredicted RBP15.28■□□□□ 0.04
LINC02048-201ENST00000440556 MSL1Q68DK7 614 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 NBPF5PQ86XG9 351 aaPredicted RBP15.28■□□□□ 0.04
LINC02048-201ENST00000440556 LMBR1Q8WVP7 490 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 SPDL1Q96EA4 605 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 ANKRD27Q96NW4 1050 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 SPAG5Q96R06 1193 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 GDF3Q9NR23 364 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 HAUS2Q9NVX0 235 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 TRIM10Q9UDY6 481 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 DMGDHQ9UI17 866 aaKnown RBP15.28■□□□□ 0.04
LINC02048-201ENST00000440556 TSKSQ9UJT2 592 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 CORO1CQ9ULV4 474 aaPredicted RBP15.28■□□□□ 0.04
LINC02048-201ENST00000440556 ANGEL1Q9UNK9 670 aaKnown RBP15.28■□□□□ 0.04
LINC02048-201ENST00000440556 HYOU1Q9Y4L1 999 aa15.28■□□□□ 0.04
LINC02048-201ENST00000440556 CFAP73A6NFT4 308 aa15.27■□□□□ 0.04
LINC02048-201ENST00000440556 PTPN12Q05209 780 aaKnown RBP15.27■□□□□ 0.04
LINC02048-201ENST00000440556 BIRC3Q13489 604 aa15.27■□□□□ 0.04
LINC02048-201ENST00000440556 CCDC181Q5TID7 509 aa15.27■□□□□ 0.04
LINC02048-201ENST00000440556 KLHL10Q6JEL2 608 aa15.27■□□□□ 0.04
LINC02048-201ENST00000440556 C8orf74Q6P047 294 aa15.27■□□□□ 0.04
LINC02048-201ENST00000440556 MICAL1Q8TDZ2 1067 aa15.27■□□□□ 0.04
LINC02048-201ENST00000440556 CCDC43Q96MW1 224 aaKnown RBP15.27■□□□□ 0.04
LINC02048-201ENST00000440556 TMX4Q9H1E5 349 aaPredicted RBP15.27■□□□□ 0.04
LINC02048-201ENST00000440556 NOD2Q9HC29 1040 aa15.27■□□□□ 0.04
LINC02048-201ENST00000440556 DDX21Q9NR30 783 aaKnown RBP eCLIP15.27■□□□□ 0.04
LINC02048-201ENST00000440556 RIPOR2Q9Y4F9 1068 aa15.27■□□□□ 0.04
LINC02048-201ENST00000440556 ZNF233A6NK53 670 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 KCNJ18B7U540 433 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 H7C1D1 291 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 IRF6O14896 467 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 TRAPPC3O43617 180 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 BUB1BO60566 1050 aaPredicted RBP15.26■□□□□ 0.03
LINC02048-201ENST00000440556 BMP15O95972 392 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 PAEPP09466 180 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 CCT6AP40227 531 aaKnown RBP15.26■□□□□ 0.03
LINC02048-201ENST00000440556 STX17P56962 302 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 ANTXR2P58335 489 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 UBXN1Q04323 297 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 DPYDQ12882 1025 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 KCNJ12Q14500 433 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 E2F5Q15329 346 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 RABL6Q3YEC7 729 aaPredicted RBP15.26■□□□□ 0.03
LINC02048-201ENST00000440556 HAUS3Q68CZ6 603 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 CAPRIN2Q6IMN6 1127 aaKnown RBP15.26■□□□□ 0.03
LINC02048-201ENST00000440556 PROSER2Q86WR7 435 aaPredicted RBP15.26■□□□□ 0.03
LINC02048-201ENST00000440556 SH2D3CQ8N5H7 860 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 OSBPL9Q96SU4 736 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 OSBPL7Q9BZF2 842 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 GPHNQ9NQX3 736 aaPredicted RBP15.26■□□□□ 0.03
LINC02048-201ENST00000440556 SWAP70Q9UH65 585 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 TRPC6Q9Y210 931 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 RNF225M0QZC1 329 aaPredicted RBP15.26■□□□□ 0.03
LINC02048-201ENST00000440556 DNM1LO00429 736 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 AHCYL1O43865 530 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 LUC7L3O95232 432 aaKnown RBP15.26■□□□□ 0.03
LINC02048-201ENST00000440556 ANXA1P04083 346 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 HOXC9P31274 260 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 ELF3P78545 371 aaPredicted RBP15.26■□□□□ 0.03
LINC02048-201ENST00000440556 SSRP1Q08945 709 aaKnown RBP15.26■□□□□ 0.03
LINC02048-201ENST00000440556 GCKRQ14397 625 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 KCTD16Q68DU8 428 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 MB21D1Q8N884 522 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 PAGE5Q96GU1 130 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 SEC16BQ96JE7 1060 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 TMEM87BQ96K49 555 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 ALS2CR12Q96Q35 445 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 PSMD1Q99460 953 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 VPS16Q9H269 839 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 KIF9Q9HAQ2 790 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 TMBIM4Q9HC24 238 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 RMND1Q9NWS8 449 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 C15orf41Q9Y2V0 281 aa15.26■□□□□ 0.03
LINC02048-201ENST00000440556 TMEM94Q12767 1356 aa15.25■□□□□ 0.03
LINC02048-201ENST00000440556 TTC26A0AVF1 554 aa15.25■□□□□ 0.03
LINC02048-201ENST00000440556 NEURL1BA8MQ27 555 aa15.25■□□□□ 0.03
LINC02048-201ENST00000440556 ZNF185O15231 689 aa15.25■□□□□ 0.03
LINC02048-201ENST00000440556 EEF1GP26641 437 aaKnown RBP15.25■□□□□ 0.03
LINC02048-201ENST00000440556 SEC24CP53992 1094 aa15.25■□□□□ 0.03
LINC02048-201ENST00000440556 SEMA3FQ13275 785 aa15.25■□□□□ 0.03
LINC02048-201ENST00000440556 CCDC38Q502W7 563 aa15.25■□□□□ 0.03
LINC02048-201ENST00000440556 GKAP1Q5VSY0 366 aaPredicted RBP15.25■□□□□ 0.03
LINC02048-201ENST00000440556 RUFY4Q6ZNE9 571 aa15.25■□□□□ 0.03
LINC02048-201ENST00000440556 NGDNQ8NEJ9 315 aaKnown RBP15.25■□□□□ 0.03
LINC02048-201ENST00000440556 STRN4Q9NRL3 753 aa15.25■□□□□ 0.03
LINC02048-201ENST00000440556 CTNND2Q9UQB3 1225 aa15.25■□□□□ 0.03
LINC02048-201ENST00000440556 MPHOSPH10O00566 681 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms